Gene annotation
Transcriptome id Sobic.009G142000.1,Sobic.009G142000.2
Synonym Sb09g020730
Functional annotation plus-3 domain containing protein, putative, expressed
UniProt A0A1B6P8H6 , A0A1B6P8H3
Pfam PF02201 PF02213 PF03126
Panther DB PTHR14445 PTHR14445:SF39
NCBI CDD KOG1946; RNA polymerase I transcription factor UAF
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G63700 : zinc ion binding;DNA binding
RAP-DB (Rice) LOC_Os01g66140.1 : plus-3 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037385
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G294600 Homeobox domain containing protein, expressed -
2 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
3 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
4 Sobic.007G029200 myosin heavy chain-related, putative, expressed -
5 Sobic.001G453000 no apical meristem protein, putative, expressed -
6 Sobic.003G123100 expressed protein K03352: anaphase-promoting complex subunit 5
7 Sobic.008G132000 RGH1A, putative, expressed -
8 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
9 Sobic.001G536000 actin, putative, expressed K11340: ACTL6A, actin-like protein 6A
10 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -
11 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
12 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
13 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
14 Sobic.006G112700 ATPOT1, putative, expressed -
15 Sobic.010G262100 expressed protein -
16 Sobic.003G309050 - -
17 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
18 Sobic.010G001100 chromo domain containing protein, expressed -
19 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
20 Sobic.006G137600 AT hook motif family protein, expressed -


Gene co-expression network
sample Sobic009G142000 Sobic009G142000 Sobic003G294600 Sobic003G294600 Sobic009G142000--Sobic003G294600 Sobic001G451300 Sobic001G451300 Sobic009G142000--Sobic001G451300 Sobic004G085000 Sobic004G085000 Sobic009G142000--Sobic004G085000 Sobic007G029200 Sobic007G029200 Sobic009G142000--Sobic007G029200 Sobic001G453000 Sobic001G453000 Sobic009G142000--Sobic001G453000 Sobic003G123100 Sobic003G123100 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic005G200900 Sobic005G200900 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000 Sobic008G002500 Sobic008G002500 Sobic003G294600--Sobic008G002500 Sobic003G294600--Sobic009G142000 Sobic009G088000 Sobic009G088000 Sobic003G294600--Sobic009G088000 Sobic003G294600--Sobic001G453000 Sobic010G148932 Sobic010G148932 Sobic003G294600--Sobic010G148932 Sobic007G077900 Sobic007G077900 Sobic003G294600--Sobic007G077900 Sobic006G040800 Sobic006G040800 Sobic003G294600--Sobic006G040800 Sobic003G445500 Sobic003G445500 Sobic003G294600--Sobic003G445500 Sobic010G053600 Sobic010G053600 Sobic003G294600--Sobic010G053600 Sobic010G262100 Sobic010G262100 Sobic001G451300--Sobic010G262100 Sobic004G034700 Sobic004G034700 Sobic001G451300--Sobic004G034700 Sobic010G138900 Sobic010G138900 Sobic001G451300--Sobic010G138900 Sobic002G043100 Sobic002G043100 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic010G174700 Sobic010G174700 Sobic001G451300--Sobic010G174700 Sobic002G371600 Sobic002G371600 Sobic001G451300--Sobic002G371600 Sobic001G451300--Sobic009G142000 Sobic002G399800 Sobic002G399800 Sobic001G451300--Sobic002G399800 Sobic001G145400 Sobic001G145400 Sobic004G085000--Sobic001G145400 Sobic010G114900 Sobic010G114900 Sobic004G085000--Sobic010G114900 Sobic006G185200 Sobic006G185200 Sobic004G085000--Sobic006G185200 Sobic003G199300 Sobic003G199300 Sobic004G085000--Sobic003G199300 Sobic005G010900 Sobic005G010900 Sobic004G085000--Sobic005G010900 Sobic001G219900 Sobic001G219900 Sobic004G085000--Sobic001G219900 Sobic002G430300 Sobic002G430300 Sobic004G085000--Sobic002G430300 Sobic009G101200 Sobic009G101200 Sobic004G085000--Sobic009G101200 Sobic006G086600 Sobic006G086600 Sobic004G085000--Sobic006G086600 Sobic005G191900 Sobic005G191900 Sobic007G029200--Sobic005G191900 Sobic007G029200--Sobic009G142000 Sobic006G215050 Sobic006G215050 Sobic007G029200--Sobic006G215050 Sobic001G167200 Sobic001G167200 Sobic007G029200--Sobic001G167200 Sobic007G029200--Sobic004G085000 Sobic007G029200--Sobic008G002500 Sobic001G134300 Sobic001G134300 Sobic007G029200--Sobic001G134300 Sobic002G317200 Sobic002G317200 Sobic007G029200--Sobic002G317200 Sobic001G352900 Sobic001G352900 Sobic007G029200--Sobic001G352900 Sobic007G168300 Sobic007G168300 Sobic001G453000--Sobic007G168300 Sobic001G453000--Sobic003G294600 Sobic001G453000--Sobic009G142000 Sobic003G042400 Sobic003G042400 Sobic001G453000--Sobic003G042400 Sobic007G155500 Sobic007G155500 Sobic001G453000--Sobic007G155500 Sobic002G396500 Sobic002G396500 Sobic001G453000--Sobic002G396500 Sobic001G453000--Sobic004G085000 Sobic002G179400 Sobic002G179400 Sobic001G453000--Sobic002G179400 Sobic001G453000--Sobic010G114900 Sobic007G014800 Sobic007G014800 Sobic003G123100--Sobic007G014800 Sobic006G236000 Sobic006G236000 Sobic003G123100--Sobic006G236000 Sobic003G123100--Sobic009G142000 Sobic003G123100--Sobic010G262100 Sobic001G239800 Sobic001G239800 Sobic003G123100--Sobic001G239800 Sobic003G123100--Sobic001G451300 Sobic002G252100 Sobic002G252100 Sobic003G123100--Sobic002G252100 Sobic003G123100--Sobic005G010900 Sobic006G112700 Sobic006G112700 Sobic003G123100--Sobic006G112700 Sobic008G132000--Sobic005G191900 Sobic008G132000--Sobic009G142000 Sobic008G132000--Sobic003G294600 Sobic006G280200 Sobic006G280200 Sobic008G132000--Sobic006G280200 Sobic001G291000 Sobic001G291000 Sobic008G132000--Sobic001G291000 Sobic008G132000--Sobic001G453000 Sobic008G132000--Sobic003G445500 Sobic008G132000--Sobic007G077900 Sobic006G210000 Sobic006G210000 Sobic008G132000--Sobic006G210000 Sobic004G355800 Sobic004G355800 Sobic005G200900--Sobic004G355800 Sobic002G154000 Sobic002G154000 Sobic005G200900--Sobic002G154000 Sobic003G360400 Sobic003G360400 Sobic005G200900--Sobic003G360400 Sobic009G251500 Sobic009G251500 Sobic005G200900--Sobic009G251500 Sobic005G200900--Sobic009G088000 Sobic006G118700 Sobic006G118700 Sobic005G200900--Sobic006G118700 Sobic005G200900--Sobic006G210000 Sobic004G156500 Sobic004G156500 Sobic005G200900--Sobic004G156500 Sobic005G200900--Sobic008G002500 Sobic001G536000--Sobic004G034700 Sobic001G536000--Sobic009G142000 Sobic002G405500 Sobic002G405500 Sobic001G536000--Sobic002G405500 Sobic001G536000--Sobic001G451300 Sobic001G536000--Sobic001G239800 Sobic001G536000--Sobic001G453000 Sobic003G375200 Sobic003G375200 Sobic001G536000--Sobic003G375200 Sobic001G536000--Sobic006G112700 Sobic001G536000--Sobic003G294600
Octagon: transcription factors


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