Gene annotation
Transcriptome id Sobic.002G362800.1
Synonym
Functional annotation formin-like protein 20, putative, expressed
UniProt A0A1W0W740
Pfam PF10409 PF02181
Panther DB PTHR23213 PTHR23213:SF210
NCBI CDD KOG2283; Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases
KEGG Orthology K02184; formin 2
Gene Ontology GO:0005884; actin filament


Orthologs (automatic annotation)
TAIR AT5G07740 : actin binding
RAP-DB (Rice) LOC_Os07g40520.1 : formin-like protein 20, putative, expressed
MaizeGDB (Corn) Zm00025a021368 , Zm00025a048646 , Zm00025a015093
Brachypodium KQK15429
Barley HORVU2Hr1G034470.18 , HORVU2Hr1G034470.10 , HORVU2Hr1G034470.11 , HORVU2Hr1G034470.12 , HORVU2Hr1G034470.13 , HORVU2Hr1G034470.14 , HORVU2Hr1G034470.15 , HORVU2Hr1G034470.16 , HORVU2Hr1G034470.17 , HORVU2Hr1G034470.8 , HORVU2Hr1G034470.9 , HORVU2Hr1G034470.2 , HORVU2Hr1G034470.3 , HORVU2Hr1G034470.1 , HORVU2Hr1G034470.6 , HORVU2Hr1G034470.7 , HORVU2Hr1G034470.4 , HORVU2Hr1G034470.5
Wheat TraesCS2B02G209500 , TraesCS2B02G209600 , TraesCS2D02G190800 , TraesCS2D02G190700 , TraesCS2A02G182900 , TraesCS2A02G183000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G026500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL6 - SBP-box gene family member, expressed -
2 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
3 Sobic.001G111600 expressed protein -
4 Sobic.001G063700 expressed protein -
5 Sobic.002G154000 EDM2, putative, expressed -
6 Sobic.003G293200 plus-3 domain containing protein, expressed -
7 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
8 Sobic.007G168300 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed -
9 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
10 Sobic.001G334700 OsWAK28 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.006G118700 MYB family transcription factor, putative, expressed -
12 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
13 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
14 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
15 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
16 Sobic.009G256300 DNA binding protein, putative, expressed -
17 Sobic.004G158400 AML1, putative, expressed -
18 Sobic.001G400500 calpain, putative, expressed -
19 Sobic.001G384000 expressed protein -
20 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1


Gene co-expression network
sample Sobic002G362800 Sobic002G362800 Sobic001G026500 Sobic001G026500 Sobic002G362800--Sobic001G026500 Sobic010G112100 Sobic010G112100 Sobic002G362800--Sobic010G112100 Sobic001G111600 Sobic001G111600 Sobic002G362800--Sobic001G111600 Sobic001G063700 Sobic001G063700 Sobic002G362800--Sobic001G063700 Sobic002G154000 Sobic002G154000 Sobic002G362800--Sobic002G154000 Sobic003G293200 Sobic003G293200 Sobic002G362800--Sobic003G293200 Sobic003G360400 Sobic003G360400 Sobic002G362800--Sobic003G360400 Sobic007G168300 Sobic007G168300 Sobic002G362800--Sobic007G168300 Sobic008G009700 Sobic008G009700 Sobic002G362800--Sobic008G009700 Sobic001G026500--Sobic002G362800 Sobic001G026500--Sobic003G293200 Sobic006G118700 Sobic006G118700 Sobic001G026500--Sobic006G118700 Sobic001G026500--Sobic001G111600 Sobic001G026500--Sobic010G112100 Sobic001G102700 Sobic001G102700 Sobic001G026500--Sobic001G102700 Sobic005G128400 Sobic005G128400 Sobic001G026500--Sobic005G128400 Sobic007G183900 Sobic007G183900 Sobic001G026500--Sobic007G183900 Sobic005G220000 Sobic005G220000 Sobic001G026500--Sobic005G220000 Sobic010G112100--Sobic003G360400 Sobic005G112300 Sobic005G112300 Sobic010G112100--Sobic005G112300 Sobic009G256300 Sobic009G256300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic001G433800 Sobic001G433800 Sobic010G112100--Sobic001G433800 Sobic001G540400 Sobic001G540400 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic003G389200 Sobic003G389200 Sobic010G112100--Sobic003G389200 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic001G111600--Sobic003G293200 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic001G111600--Sobic010G112100 Sobic010G275500 Sobic010G275500 Sobic001G111600--Sobic010G275500 Sobic001G111600--Sobic005G220000 Sobic001G111600--Sobic002G362800 Sobic001G461400 Sobic001G461400 Sobic001G063700--Sobic001G461400 Sobic001G063700--Sobic003G360400 Sobic001G063700--Sobic010G112100 Sobic001G063700--Sobic002G154000 Sobic003G188400 Sobic003G188400 Sobic001G063700--Sobic003G188400 Sobic001G063700--Sobic001G433800 Sobic001G063700--Sobic009G256300 Sobic008G002500 Sobic008G002500 Sobic001G063700--Sobic008G002500 Sobic001G063700--Sobic001G354600 Sobic002G154000--Sobic003G360400 Sobic003G416700 Sobic003G416700 Sobic002G154000--Sobic003G416700 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic003G293200--Sobic010G001100 Sobic009G166100 Sobic009G166100 Sobic003G293200--Sobic009G166100 Sobic003G293200--Sobic005G128400 Sobic004G009600 Sobic004G009600 Sobic003G293200--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic003G293200--Sobic010G065300 Sobic004G264300 Sobic004G264300 Sobic003G293200--Sobic004G264300 Sobic007G031600 Sobic007G031600 Sobic003G293200--Sobic007G031600 Sobic007G117400 Sobic007G117400 Sobic003G293200--Sobic007G117400 Sobic003G293200--Sobic001G111600 Sobic003G360400--Sobic010G112100 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic003G360400--Sobic005G112300 Sobic003G360400--Sobic007G063000 Sobic003G360400--Sobic009G256300 Sobic003G042400 Sobic003G042400 Sobic007G168300--Sobic003G042400 Sobic005G200800 Sobic005G200800 Sobic007G168300--Sobic005G200800 Sobic007G168300--Sobic010G001100 Sobic007G168300--Sobic002G154000 Sobic009G126300 Sobic009G126300 Sobic007G168300--Sobic009G126300 Sobic007G183300 Sobic007G183300 Sobic007G168300--Sobic007G183300 Sobic001G453000 Sobic001G453000 Sobic007G168300--Sobic001G453000 Sobic001G376900 Sobic001G376900 Sobic007G168300--Sobic001G376900 Sobic005G200900 Sobic005G200900 Sobic007G168300--Sobic005G200900 Sobic002G309600 Sobic002G309600 Sobic008G009700--Sobic002G309600 Sobic005G008800 Sobic005G008800 Sobic008G009700--Sobic005G008800 Sobic008G009700--Sobic005G112300 Sobic007G065400 Sobic007G065400 Sobic008G009700--Sobic007G065400 Sobic002G071500 Sobic002G071500 Sobic008G009700--Sobic002G071500 Sobic010G002100 Sobic010G002100 Sobic008G009700--Sobic010G002100 Sobic002G153700 Sobic002G153700 Sobic008G009700--Sobic002G153700 Sobic008G009700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic008G009700--Sobic001G241200
Octagon: transcription factors


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