Gene annotation
Transcriptome id Sobic.006G118700.1
Synonym Sb06g019970, TRFL2
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YAF0
Pfam -
Panther DB PTHR21717 PTHR21717:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46590 : TRF-like 1
RAP-DB (Rice) LOC_Os02g57270.2 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056288
Brachypodium KQK11763
Barley -
Wheat TraesCS3B02G597500 , TraesCS3B02G597500
Populus -


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cDNA sequences
Sobic.006G118700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G183900 ubiquitin family protein, putative, expressed -
2 Sobic.002G264200 RNA recognition motif containing protein, expressed -
3 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
4 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
5 Sobic.004G355800 expressed protein -
6 Sobic.010G069100 expressed protein -
7 Sobic.002G366400 histone deacetylase, putative, expressed K11407: histone deacetylase 6
8 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
9 Sobic.007G091600 proline rich protein 3, putative, expressed -
10 Sobic.004G156500 expressed protein -
11 Sobic.002G154000 EDM2, putative, expressed -
12 Sobic.005G064000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
13 Sobic.009G177500 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
14 Sobic.003G416700 homeobox domain containing protein, expressed -
15 Sobic.005G191900 transporter family protein, putative, expressed -
16 Sobic.007G078600 YT521-B, putative, expressed -
17 Sobic.001G094900 protein transport protein Sec23B, putative, expressed K14006: protein transport protein SEC23
18 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
19 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
20 Sobic.007G061000 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor


Gene co-expression network
sample Sobic006G118700 Sobic006G118700 Sobic007G183900 Sobic007G183900 Sobic006G118700--Sobic007G183900 Sobic002G264200 Sobic002G264200 Sobic006G118700--Sobic002G264200 Sobic010G112100 Sobic010G112100 Sobic006G118700--Sobic010G112100 Sobic003G360400 Sobic003G360400 Sobic006G118700--Sobic003G360400 Sobic004G355800 Sobic004G355800 Sobic006G118700--Sobic004G355800 Sobic010G069100 Sobic010G069100 Sobic006G118700--Sobic010G069100 Sobic002G366400 Sobic002G366400 Sobic006G118700--Sobic002G366400 Sobic010G236400 Sobic010G236400 Sobic006G118700--Sobic010G236400 Sobic007G091600 Sobic007G091600 Sobic006G118700--Sobic007G091600 Sobic003G416700 Sobic003G416700 Sobic007G183900--Sobic003G416700 Sobic007G183900--Sobic006G118700 Sobic007G183900--Sobic003G360400 Sobic007G183900--Sobic010G236400 Sobic009G044800 Sobic009G044800 Sobic007G183900--Sobic009G044800 Sobic007G183900--Sobic010G069100 Sobic010G275500 Sobic010G275500 Sobic007G183900--Sobic010G275500 Sobic001G354600 Sobic001G354600 Sobic007G183900--Sobic001G354600 Sobic007G183900--Sobic002G264200 Sobic002G264200--Sobic010G069100 Sobic002G264200--Sobic003G416700 Sobic001G461400 Sobic001G461400 Sobic002G264200--Sobic001G461400 Sobic008G153000 Sobic008G153000 Sobic002G264200--Sobic008G153000 Sobic002G264200--Sobic010G236400 Sobic002G071500 Sobic002G071500 Sobic002G264200--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic002G264200--Sobic007G065400 Sobic002G153700 Sobic002G153700 Sobic002G264200--Sobic002G153700 Sobic002G264200--Sobic006G118700 Sobic010G112100--Sobic003G360400 Sobic005G112300 Sobic005G112300 Sobic010G112100--Sobic005G112300 Sobic009G256300 Sobic009G256300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic001G433800 Sobic001G433800 Sobic010G112100--Sobic001G433800 Sobic001G540400 Sobic001G540400 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic003G389200 Sobic003G389200 Sobic010G112100--Sobic003G389200 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G360400--Sobic003G389200 Sobic003G360400--Sobic009G044800 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic003G360400--Sobic009G256300 Sobic005G200900 Sobic005G200900 Sobic004G355800--Sobic005G200900 Sobic004G355800--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G355800--Sobic006G210000 Sobic004G355800--Sobic002G154000 Sobic004G155600 Sobic004G155600 Sobic004G355800--Sobic004G155600 Sobic005G191900 Sobic005G191900 Sobic004G355800--Sobic005G191900 Sobic006G067600 Sobic006G067600 Sobic004G355800--Sobic006G067600 Sobic004G156500 Sobic004G156500 Sobic004G355800--Sobic004G156500 Sobic008G002500 Sobic008G002500 Sobic004G355800--Sobic008G002500 Sobic010G069100--Sobic002G071500 Sobic010G069100--Sobic002G264200 Sobic010G069100--Sobic005G112300 Sobic008G047800 Sobic008G047800 Sobic010G069100--Sobic008G047800 Sobic008G009700 Sobic008G009700 Sobic010G069100--Sobic008G009700 Sobic001G154900 Sobic001G154900 Sobic010G069100--Sobic001G154900 Sobic004G146500 Sobic004G146500 Sobic010G069100--Sobic004G146500 Sobic010G069100--Sobic007G065400 Sobic009G005500 Sobic009G005500 Sobic010G069100--Sobic009G005500 Sobic002G366400--Sobic003G408600 Sobic002G366400--Sobic010G112100 Sobic007G159900 Sobic007G159900 Sobic002G366400--Sobic007G159900 Sobic002G366400--Sobic006G118700 Sobic002G366400--Sobic003G360400 Sobic002G045600 Sobic002G045600 Sobic002G366400--Sobic002G045600 Sobic002G366400--Sobic007G183900 Sobic003G266001 Sobic003G266001 Sobic002G366400--Sobic003G266001 Sobic002G366400--Sobic001G354600 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic010G236400--Sobic002G264200 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic004G274200 Sobic004G274200 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic010G236400--Sobic007G183900 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic007G091600--Sobic006G118700 Sobic007G191700 Sobic007G191700 Sobic007G091600--Sobic007G191700 Sobic007G091600--Sobic002G264200 Sobic007G091600--Sobic004G084300 Sobic005G021500 Sobic005G021500 Sobic007G091600--Sobic005G021500 Sobic007G091600--Sobic010G236400 Sobic009G177500 Sobic009G177500 Sobic007G091600--Sobic009G177500 Sobic004G129300 Sobic004G129300 Sobic007G091600--Sobic004G129300 Sobic003G394300 Sobic003G394300 Sobic007G091600--Sobic003G394300
Octagon: transcription factors


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