Gene annotation
Transcriptome id Sobic.006G261400.1
Synonym Sb06g032440
Functional annotation peptidase, trypsin-like serine and cysteine proteases, putative, expressed
UniProt A0A1B6PP02
Pfam -
Panther DB PTHR31521 PTHR31521:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45030 : Trypsin family protein
RAP-DB (Rice) LOC_Os08g31470.1 : peptidase, trypsin-like serine and cysteine proteases, putative, expressed
MaizeGDB (Corn) Zm00025a009362 , Zm00025a057349
Brachypodium PNT62253 , KQJ85562 , KQJ84586 , KQJ84587
Barley HORVU5Hr1G000170.8 , HORVU5Hr1G000170.3 , HORVU5Hr1G000170.2 , HORVU5Hr1G000170.1 , HORVU5Hr1G000170.7 , HORVU5Hr1G000170.6 , HORVU5Hr1G000170.5 , HORVU5Hr1G000170.4
Wheat TraesCS5A02G000200 , TraesCS5D02G000500 , TraesCS5B02G001500
Populus -


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cDNA sequences
Sobic.006G261400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G379200 wound-responsive family protein, putative, expressed -
2 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
3 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
4 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
5 Sobic.010G000800 PHD-finger domain containing protein, expressed -
6 Sobic.002G048700 BT1 family protein, putative, expressed -
7 Sobic.001G051700 expressed protein -
8 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
9 Sobic.003G296900 expressed protein -
10 Sobic.002G179400 DNA binding protein, putative, expressed -
11 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
12 Sobic.001G457900 expressed protein -
13 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
14 Sobic.004G322400 WD40-like, putative, expressed -
15 Sobic.007G145400 expressed protein -
16 Sobic.004G124300 tesmin/TSO1-like CXC domain containing protein, expressed -
17 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
18 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
19 Sobic.001G111600 expressed protein -
20 Sobic.007G183900 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic006G261400 Sobic006G261400 Sobic003G379200 Sobic003G379200 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G267600 Sobic006G267600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic010G000800 Sobic010G000800 Sobic006G261400--Sobic010G000800 Sobic002G048700 Sobic002G048700 Sobic006G261400--Sobic002G048700 Sobic001G051700 Sobic001G051700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic003G379200--Sobic006G261400 Sobic009G044800 Sobic009G044800 Sobic003G379200--Sobic009G044800 Sobic006G088200 Sobic006G088200 Sobic003G379200--Sobic006G088200 Sobic003G360400 Sobic003G360400 Sobic003G379200--Sobic003G360400 Sobic008G083200 Sobic008G083200 Sobic003G379200--Sobic008G083200 Sobic003G379200--Sobic010G000800 Sobic001G354600 Sobic001G354600 Sobic003G379200--Sobic001G354600 Sobic003G363700 Sobic003G363700 Sobic003G379200--Sobic003G363700 Sobic006G174850 Sobic006G174850 Sobic003G379200--Sobic006G174850 Sobic007G162100 Sobic007G162100 Sobic006G127600--Sobic007G162100 Sobic006G127600--Sobic006G261400 Sobic008G157200 Sobic008G157200 Sobic006G127600--Sobic008G157200 Sobic009G256900 Sobic009G256900 Sobic006G127600--Sobic009G256900 Sobic006G127600--Sobic010G000800 Sobic001G251100 Sobic001G251100 Sobic006G127600--Sobic001G251100 Sobic001G333100 Sobic001G333100 Sobic006G127600--Sobic001G333100 Sobic006G127600--Sobic003G379200 Sobic006G131000 Sobic006G131000 Sobic006G127600--Sobic006G131000 Sobic006G267600--Sobic006G261400 Sobic006G267600--Sobic001G051700 Sobic001G393900 Sobic001G393900 Sobic006G267600--Sobic001G393900 Sobic002G154000 Sobic002G154000 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic003G416700 Sobic003G416700 Sobic006G267600--Sobic003G416700 Sobic003G337300 Sobic003G337300 Sobic003G104000--Sobic003G337300 Sobic002G256700 Sobic002G256700 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic003G104000--Sobic001G251100 Sobic002G142900 Sobic002G142900 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic003G104000--Sobic004G131300 Sobic003G104000--Sobic006G261400 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic002G048700--Sobic006G261400 Sobic002G048700--Sobic006G267600 Sobic002G048700--Sobic001G051700 Sobic002G048700--Sobic003G416700 Sobic004G040200 Sobic004G040200 Sobic002G048700--Sobic004G040200 Sobic002G425500 Sobic002G425500 Sobic002G048700--Sobic002G425500 Sobic001G111600 Sobic001G111600 Sobic002G048700--Sobic001G111600 Sobic007G183900 Sobic007G183900 Sobic002G048700--Sobic007G183900 Sobic008G002500 Sobic008G002500 Sobic002G048700--Sobic008G002500 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic001G051700--Sobic006G267600 Sobic001G051700--Sobic002G154000 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic002G133300 Sobic002G133300 Sobic004G131300--Sobic002G133300 Sobic004G131300--Sobic002G142900 Sobic005G172500 Sobic005G172500 Sobic004G131300--Sobic005G172500 Sobic009G084900 Sobic009G084900 Sobic004G131300--Sobic009G084900 Sobic004G256500 Sobic004G256500 Sobic004G131300--Sobic004G256500 Sobic010G059500 Sobic010G059500 Sobic004G131300--Sobic010G059500 Sobic007G054800 Sobic007G054800 Sobic004G131300--Sobic007G054800 Sobic006G136400 Sobic006G136400 Sobic004G131300--Sobic006G136400 Sobic004G131300--Sobic002G256700 Sobic003G043000 Sobic003G043000 Sobic003G296900--Sobic003G043000 Sobic001G065100 Sobic001G065100 Sobic003G296900--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic003G296900--Sobic004G053500 Sobic003G308500 Sobic003G308500 Sobic003G296900--Sobic003G308500 Sobic003G296900--Sobic004G265500 Sobic003G241700 Sobic003G241700 Sobic003G296900--Sobic003G241700 Sobic001G255800 Sobic001G255800 Sobic003G296900--Sobic001G255800 Sobic003G296900--Sobic010G000800 Sobic003G296900--Sobic004G131300
Octagon: transcription factors


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