Gene annotation
Transcriptome id Sobic.004G124300.1
Synonym Sb04g010380
Functional annotation tesmin/TSO1-like CXC domain containing protein, expressed
UniProt A0A194YP99
Pfam PF03638
Panther DB PTHR12446 PTHR12446:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29000 : Tesmin/TSO1-like CXC domain-containing protein
RAP-DB (Rice) LOC_Os02g17460.1 : tesmin/TSO1-like CXC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019800
Brachypodium KQJ94380
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
2 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
3 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
4 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
5 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
6 Sobic.007G173500 growth regulator related protein, putative, expressed -
7 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
8 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
9 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
11 Sobic.001G393900 FAD binding domain containing protein, expressed -
12 Sobic.003G296900 expressed protein -
13 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
14 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3
15 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
16 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
17 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
18 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
19 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
20 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -


Gene co-expression network
sample Sobic004G124300 Sobic004G124300 Sobic001G020000 Sobic001G020000 Sobic004G124300--Sobic001G020000 Sobic001G035200 Sobic001G035200 Sobic004G124300--Sobic001G035200 Sobic006G261400 Sobic006G261400 Sobic004G124300--Sobic006G261400 Sobic010G059500 Sobic010G059500 Sobic004G124300--Sobic010G059500 Sobic003G363700 Sobic003G363700 Sobic004G124300--Sobic003G363700 Sobic007G173500 Sobic007G173500 Sobic004G124300--Sobic007G173500 Sobic001G087600 Sobic001G087600 Sobic004G124300--Sobic001G087600 Sobic009G228000 Sobic009G228000 Sobic004G124300--Sobic009G228000 Sobic001G145400 Sobic001G145400 Sobic004G124300--Sobic001G145400 Sobic001G219600 Sobic001G219600 Sobic001G020000--Sobic001G219600 Sobic001G433800 Sobic001G433800 Sobic001G020000--Sobic001G433800 Sobic002G317200 Sobic002G317200 Sobic001G020000--Sobic002G317200 Sobic001G354600 Sobic001G354600 Sobic001G020000--Sobic001G354600 Sobic001G020000--Sobic001G087600 Sobic002G425500 Sobic002G425500 Sobic001G020000--Sobic002G425500 Sobic003G095900 Sobic003G095900 Sobic001G020000--Sobic003G095900 Sobic001G352900 Sobic001G352900 Sobic001G020000--Sobic001G352900 Sobic001G020000--Sobic004G124300 Sobic001G035200--Sobic010G059500 Sobic001G035200--Sobic001G145400 Sobic010G185400 Sobic010G185400 Sobic001G035200--Sobic010G185400 Sobic006G077200 Sobic006G077200 Sobic001G035200--Sobic006G077200 Sobic010G034100 Sobic010G034100 Sobic001G035200--Sobic010G034100 Sobic009G084900 Sobic009G084900 Sobic001G035200--Sobic009G084900 Sobic001G155400 Sobic001G155400 Sobic001G035200--Sobic001G155400 Sobic002G371700 Sobic002G371700 Sobic001G035200--Sobic002G371700 Sobic001G035200--Sobic001G087600 Sobic003G379200 Sobic003G379200 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G267600 Sobic006G267600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic010G000800 Sobic010G000800 Sobic006G261400--Sobic010G000800 Sobic002G048700 Sobic002G048700 Sobic006G261400--Sobic002G048700 Sobic001G051700 Sobic001G051700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic003G363700--Sobic002G371700 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G043000 Sobic003G043000 Sobic003G363700--Sobic003G043000 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic001G393900 Sobic001G393900 Sobic007G173500--Sobic001G393900 Sobic007G173500--Sobic001G020000 Sobic007G212300 Sobic007G212300 Sobic007G173500--Sobic007G212300 Sobic007G173500--Sobic003G095900 Sobic003G260400 Sobic003G260400 Sobic007G173500--Sobic003G260400 Sobic004G309900 Sobic004G309900 Sobic007G173500--Sobic004G309900 Sobic003G016900 Sobic003G016900 Sobic007G173500--Sobic003G016900 Sobic007G173500--Sobic004G124300 Sobic006G096900 Sobic006G096900 Sobic007G173500--Sobic006G096900 Sobic001G151100 Sobic001G151100 Sobic001G087600--Sobic001G151100 Sobic001G461400 Sobic001G461400 Sobic001G087600--Sobic001G461400 Sobic001G087600--Sobic001G020000 Sobic002G145800 Sobic002G145800 Sobic001G087600--Sobic002G145800 Sobic002G154000 Sobic002G154000 Sobic001G087600--Sobic002G154000 Sobic003G416700 Sobic003G416700 Sobic001G087600--Sobic003G416700 Sobic002G430300 Sobic002G430300 Sobic001G087600--Sobic002G430300 Sobic005G167700 Sobic005G167700 Sobic001G087600--Sobic005G167700 Sobic001G087600--Sobic002G371700 Sobic009G107300 Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic003G241700 Sobic003G241700 Sobic009G228000--Sobic003G241700 Sobic009G228000--Sobic003G363700 Sobic002G063900 Sobic002G063900 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic004G209700 Sobic004G209700 Sobic009G228000--Sobic004G209700 Sobic009G228000--Sobic006G234700 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000
Octagon: transcription factors


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