Gene annotation
Transcriptome id Sobic.002G048700.3,Sobic.002G048700.1,Sobic.002G048700.2
Synonym Sb02g004070
Functional annotation BT1 family protein, putative, expressed
UniProt A0A1B6Q998 , A0A1B6Q9C4 , A0A1B6Q988
Pfam PF03092 PF07690
Panther DB PTHR31585 PTHR31585:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G32040 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os07g07654.1 : BT1 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008545 , Zm00025a045118 , Zm00025a016093
Brachypodium KQK20680 , PNT76942 , PNT76943 , KQK12724
Barley HORVU5Hr1G105030.18 , HORVU5Hr1G105030.19 , HORVU5Hr1G105030.14 , HORVU5Hr1G105030.15 , HORVU5Hr1G105030.10 , HORVU5Hr1G105030.11 , HORVU5Hr1G105030.12 , HORVU5Hr1G105030.6 , HORVU5Hr1G105030.7 , HORVU5Hr1G105030.4 , HORVU5Hr1G105030.5 , HORVU5Hr1G105030.2 , HORVU5Hr1G105030.3 , HORVU5Hr1G105030.1 , HORVU5Hr1G105030.9 , HORVU2Hr1G054930.10 , HORVU5Hr1G105030.21 , HORVU5Hr1G105030.20 , HORVU5Hr1G105030.23 , HORVU5Hr1G105030.22 , HORVU5Hr1G105030.25 , HORVU5Hr1G105030.24 , HORVU5Hr1G105030.27 , HORVU5Hr1G105030.26 , HORVU5Hr1G105030.29 , HORVU5Hr1G105030.28 , HORVU5Hr1G105030.13 , HORVU5Hr1G105030.30 , HORVU2Hr1G054930.9 , HORVU2Hr1G054930.8 , HORVU2Hr1G054930.5 , HORVU2Hr1G054930.4 , HORVU2Hr1G054930.7 , HORVU2Hr1G054930.6 , HORVU2Hr1G054930.1 , HORVU2Hr1G054930.3 , HORVU2Hr1G054930.2
Wheat TraesCS2A02G238000 , TraesCS5A02G435600 , TraesCS5A02G435600 , TraesCS2B02G258600 , TraesCS2D02G244100 , TraesCS5D02G443300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
2 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
3 Sobic.001G051700 expressed protein -
4 Sobic.003G416700 homeobox domain containing protein, expressed -
5 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
6 Sobic.002G425500 ATPOT1, putative, expressed -
7 Sobic.001G111600 expressed protein -
8 Sobic.007G183900 ubiquitin family protein, putative, expressed -
9 Sobic.008G002500 RCD1, putative, expressed -
10 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
11 Sobic.010G026600 B3 DNA binding domain containing protein, expressed -
12 Sobic.002G154000 EDM2, putative, expressed -
13 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
14 Sobic.006G040800 expressed protein -
15 Sobic.005G191900 transporter family protein, putative, expressed -
16 Sobic.003G297500 glucosidase 2 subunit beta precursor, putative, expressed K08288: protein kinase C substrate 80K-H
17 Sobic.001G393900 FAD binding domain containing protein, expressed -
18 Sobic.010G204400 phox domain-containing protein, putative, expressed -
19 Sobic.004G332400 neurochondrin family protein, putative, expressed -
20 Sobic.009G158100 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial


Gene co-expression network
sample Sobic002G048700 Sobic002G048700 Sobic006G261400 Sobic006G261400 Sobic002G048700--Sobic006G261400 Sobic006G267600 Sobic006G267600 Sobic002G048700--Sobic006G267600 Sobic001G051700 Sobic001G051700 Sobic002G048700--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic002G048700--Sobic003G416700 Sobic004G040200 Sobic004G040200 Sobic002G048700--Sobic004G040200 Sobic002G425500 Sobic002G425500 Sobic002G048700--Sobic002G425500 Sobic001G111600 Sobic001G111600 Sobic002G048700--Sobic001G111600 Sobic007G183900 Sobic007G183900 Sobic002G048700--Sobic007G183900 Sobic008G002500 Sobic008G002500 Sobic002G048700--Sobic008G002500 Sobic003G379200 Sobic003G379200 Sobic006G261400--Sobic003G379200 Sobic006G127600 Sobic006G127600 Sobic006G261400--Sobic006G127600 Sobic006G261400--Sobic006G267600 Sobic003G104000 Sobic003G104000 Sobic006G261400--Sobic003G104000 Sobic010G000800 Sobic010G000800 Sobic006G261400--Sobic010G000800 Sobic006G261400--Sobic002G048700 Sobic006G261400--Sobic001G051700 Sobic004G131300 Sobic004G131300 Sobic006G261400--Sobic004G131300 Sobic003G296900 Sobic003G296900 Sobic006G261400--Sobic003G296900 Sobic006G267600--Sobic006G261400 Sobic006G267600--Sobic001G051700 Sobic001G393900 Sobic001G393900 Sobic006G267600--Sobic001G393900 Sobic002G154000 Sobic002G154000 Sobic006G267600--Sobic002G154000 Sobic007G063000 Sobic007G063000 Sobic006G267600--Sobic007G063000 Sobic006G267600--Sobic002G048700 Sobic009G158100 Sobic009G158100 Sobic006G267600--Sobic009G158100 Sobic004G322400 Sobic004G322400 Sobic006G267600--Sobic004G322400 Sobic006G267600--Sobic003G416700 Sobic001G051700--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G051700--Sobic002G145800 Sobic001G051700--Sobic006G267600 Sobic001G051700--Sobic002G154000 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic007G183300 Sobic007G183300 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic003G416700--Sobic007G183900 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic003G416700--Sobic010G275500 Sobic004G332400 Sobic004G332400 Sobic004G040200--Sobic004G332400 Sobic006G040800 Sobic006G040800 Sobic004G040200--Sobic006G040800 Sobic004G040200--Sobic002G048700 Sobic004G040200--Sobic008G002500 Sobic009G255600 Sobic009G255600 Sobic004G040200--Sobic009G255600 Sobic002G361400 Sobic002G361400 Sobic004G040200--Sobic002G361400 Sobic007G225100 Sobic007G225100 Sobic004G040200--Sobic007G225100 Sobic004G040200--Sobic001G051700 Sobic004G123400 Sobic004G123400 Sobic004G040200--Sobic004G123400 Sobic001G020000 Sobic001G020000 Sobic002G425500--Sobic001G020000 Sobic001G155400 Sobic001G155400 Sobic002G425500--Sobic001G155400 Sobic003G188400 Sobic003G188400 Sobic002G425500--Sobic003G188400 Sobic004G107200 Sobic004G107200 Sobic002G425500--Sobic004G107200 Sobic002G425500--Sobic007G183900 Sobic004G185800 Sobic004G185800 Sobic002G425500--Sobic004G185800 Sobic001G227200 Sobic001G227200 Sobic002G425500--Sobic001G227200 Sobic002G425500--Sobic008G002500 Sobic004G155600 Sobic004G155600 Sobic002G425500--Sobic004G155600 Sobic002G068100 Sobic002G068100 Sobic001G111600--Sobic002G068100 Sobic003G293200 Sobic003G293200 Sobic001G111600--Sobic003G293200 Sobic005G128400 Sobic005G128400 Sobic001G111600--Sobic005G128400 Sobic001G354600 Sobic001G354600 Sobic001G111600--Sobic001G354600 Sobic001G457900 Sobic001G457900 Sobic001G111600--Sobic001G457900 Sobic010G112100 Sobic010G112100 Sobic001G111600--Sobic010G112100 Sobic001G111600--Sobic010G275500 Sobic005G220000 Sobic005G220000 Sobic001G111600--Sobic005G220000 Sobic002G362800 Sobic002G362800 Sobic001G111600--Sobic002G362800 Sobic007G183900--Sobic003G416700 Sobic006G118700 Sobic006G118700 Sobic007G183900--Sobic006G118700 Sobic007G183900--Sobic003G360400 Sobic010G236400 Sobic010G236400 Sobic007G183900--Sobic010G236400 Sobic009G044800 Sobic009G044800 Sobic007G183900--Sobic009G044800 Sobic010G069100 Sobic010G069100 Sobic007G183900--Sobic010G069100 Sobic007G183900--Sobic010G275500 Sobic007G183900--Sobic001G354600 Sobic007G183900--Sobic002G264200 Sobic008G002500--Sobic006G040800 Sobic008G002500--Sobic001G063700 Sobic008G002500--Sobic001G354600 Sobic008G002500--Sobic003G360400 Sobic009G088000 Sobic009G088000 Sobic008G002500--Sobic009G088000 Sobic008G002500--Sobic003G188400 Sobic001G522600 Sobic001G522600 Sobic008G002500--Sobic001G522600 Sobic001G433800 Sobic001G433800 Sobic008G002500--Sobic001G433800 Sobic008G002500--Sobic004G332400
Octagon: transcription factors


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