Gene annotation
Transcriptome id Sobic.009G137900.1
Synonym Sb09g020390
Functional annotation OsFBL9 - F-box domain and LRR containing protein, expressed
UniProt C5YXV1
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF74
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os02g33400.1 : OsFBL9 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a043704
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G137900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
2 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
3 Sobic.003G051700 universal stress protein domain containing protein, putative, expressed -
4 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
5 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
6 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
7 Sobic.001G426900 coronatine-insensitive protein, putative, expressed K13463: coronatine-insensitive protein 1
8 Sobic.005G072400 expressed protein -
9 Sobic.003G343600 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.006G051900 expressed protein -
11 Sobic.009G059400 expressed protein -
12 Sobic.001G373400 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
13 Sobic.006G161000 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
14 Sobic.007G026000 ATBET9, putative, expressed -
15 Sobic.006G067200 - -
16 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G472100 frigida, putative, expressed -
18 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
20 Sobic.008G073000 expressed protein -


Gene co-expression network
sample Sobic009G137900 Sobic009G137900 Sobic009G017200 Sobic009G017200 Sobic009G137900--Sobic009G017200 Sobic005G198200 Sobic005G198200 Sobic009G137900--Sobic005G198200 Sobic003G051700 Sobic003G051700 Sobic009G137900--Sobic003G051700 Sobic006G278200 Sobic006G278200 Sobic009G137900--Sobic006G278200 Sobic004G180900 Sobic004G180900 Sobic009G137900--Sobic004G180900 Sobic008G111800 Sobic008G111800 Sobic009G137900--Sobic008G111800 Sobic001G426900 Sobic001G426900 Sobic009G137900--Sobic001G426900 Sobic005G072400 Sobic005G072400 Sobic009G137900--Sobic005G072400 Sobic003G343600 Sobic003G343600 Sobic009G137900--Sobic003G343600 Sobic009G017200--Sobic004G180900 Sobic009G059400 Sobic009G059400 Sobic009G017200--Sobic009G059400 Sobic009G017200--Sobic009G137900 Sobic008G058800 Sobic008G058800 Sobic009G017200--Sobic008G058800 Sobic006G144000 Sobic006G144000 Sobic009G017200--Sobic006G144000 Sobic001G425000 Sobic001G425000 Sobic009G017200--Sobic001G425000 Sobic001G042200 Sobic001G042200 Sobic009G017200--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic009G017200--Sobic010G077500 Sobic009G017200--Sobic005G198200 Sobic005G198200--Sobic009G059400 Sobic009G113100 Sobic009G113100 Sobic005G198200--Sobic009G113100 Sobic005G198200--Sobic009G137900 Sobic005G198200--Sobic005G072400 Sobic005G198200--Sobic009G017200 Sobic001G472100 Sobic001G472100 Sobic005G198200--Sobic001G472100 Sobic005G198200--Sobic008G111800 Sobic005G198200--Sobic004G180900 Sobic005G198200--Sobic010G077500 Sobic003G051700--Sobic009G137900 Sobic002G165800 Sobic002G165800 Sobic003G051700--Sobic002G165800 Sobic003G051700--Sobic001G426900 Sobic003G051700--Sobic010G077500 Sobic004G311400 Sobic004G311400 Sobic003G051700--Sobic004G311400 Sobic003G051700--Sobic005G198200 Sobic003G051700--Sobic009G017200 Sobic003G355000 Sobic003G355000 Sobic003G051700--Sobic003G355000 Sobic003G051700--Sobic001G042200 Sobic002G095700 Sobic002G095700 Sobic006G278200--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic006G278200--Sobic008G073000 Sobic006G278200--Sobic005G072400 Sobic005G030300 Sobic005G030300 Sobic006G278200--Sobic005G030300 Sobic001G202266 Sobic001G202266 Sobic006G278200--Sobic001G202266 Sobic002G341100 Sobic002G341100 Sobic006G278200--Sobic002G341100 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic002G067800 Sobic002G067800 Sobic006G278200--Sobic002G067800 Sobic004G180900--Sobic009G017200 Sobic007G056500 Sobic007G056500 Sobic004G180900--Sobic007G056500 Sobic004G180900--Sobic001G425000 Sobic004G345400 Sobic004G345400 Sobic004G180900--Sobic004G345400 Sobic006G186400 Sobic006G186400 Sobic004G180900--Sobic006G186400 Sobic004G180900--Sobic008G058800 Sobic007G026000 Sobic007G026000 Sobic004G180900--Sobic007G026000 Sobic004G180900--Sobic010G077500 Sobic003G381600 Sobic003G381600 Sobic004G180900--Sobic003G381600 Sobic008G111800--Sobic009G059400 Sobic003G365700 Sobic003G365700 Sobic008G111800--Sobic003G365700 Sobic008G111800--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic008G111800--Sobic007G218600 Sobic007G148400 Sobic007G148400 Sobic008G111800--Sobic007G148400 Sobic008G111800--Sobic009G137900 Sobic009G186700 Sobic009G186700 Sobic008G111800--Sobic009G186700 Sobic008G111800--Sobic009G017200 Sobic001G025700 Sobic001G025700 Sobic008G111800--Sobic001G025700 Sobic001G356500 Sobic001G356500 Sobic001G426900--Sobic001G356500 Sobic001G206100 Sobic001G206100 Sobic001G426900--Sobic001G206100 Sobic002G320500 Sobic002G320500 Sobic001G426900--Sobic002G320500 Sobic005G021500 Sobic005G021500 Sobic001G426900--Sobic005G021500 Sobic001G426900--Sobic008G073000 Sobic001G228700 Sobic001G228700 Sobic001G426900--Sobic001G228700 Sobic009G000500 Sobic009G000500 Sobic001G426900--Sobic009G000500 Sobic010G194700 Sobic010G194700 Sobic001G426900--Sobic010G194700 Sobic001G426900--Sobic002G165800 Sobic005G072400--Sobic006G278200 Sobic002G253600 Sobic002G253600 Sobic005G072400--Sobic002G253600 Sobic005G072400--Sobic005G198200 Sobic005G072400--Sobic003G343600 Sobic005G072400--Sobic009G137900 Sobic001G230500 Sobic001G230500 Sobic005G072400--Sobic001G230500 Sobic003G415100 Sobic003G415100 Sobic005G072400--Sobic003G415100 Sobic002G159200 Sobic002G159200 Sobic005G072400--Sobic002G159200 Sobic006G261100 Sobic006G261100 Sobic005G072400--Sobic006G261100 Sobic003G140900 Sobic003G140900 Sobic003G343600--Sobic003G140900 Sobic002G223300 Sobic002G223300 Sobic003G343600--Sobic002G223300 Sobic003G343600--Sobic005G072400 Sobic006G248500 Sobic006G248500 Sobic003G343600--Sobic006G248500 Sobic004G285000 Sobic004G285000 Sobic003G343600--Sobic004G285000 Sobic002G268900 Sobic002G268900 Sobic003G343600--Sobic002G268900 Sobic003G343600--Sobic005G198200 Sobic003G343600--Sobic006G278200 Sobic004G085300 Sobic004G085300 Sobic003G343600--Sobic004G085300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.