Gene annotation
Transcriptome id Sobic.001G215400.1
Synonym Sb01g018980
Functional annotation OsFBX387 - F-box domain containing protein, expressed
UniProt C5WYB7
Pfam PF08268 PF00646
Panther DB PTHR31790 PTHR31790:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G49450 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os10g34300.1 : OsFBX387 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G215400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G289400 farnesyltransferase subunit beta, putative, expressed K05954: protein farnesyltransferase subunit beta
2 Sobic.009G151200 expressed protein -
3 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
5 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
6 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
7 Sobic.008G127400 OsFBX252 - F-box domain containing protein, expressed -
8 Sobic.007G026000 ATBET9, putative, expressed -
9 Sobic.009G195200 ESP1, putative, expressed -
10 Sobic.006G248500 expressed protein -
11 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
13 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
14 Sobic.002G389800 expressed protein K14440: SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
15 Sobic.002G262700 RNA recognition motif containing protein, putative, expressed K13155: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
16 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
17 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
18 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
19 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6
20 Sobic.003G427100 WD domain, G-beta repeat domain containing protein, expressed K15542: polyadenylation factor subunit 2


Gene co-expression network
sample Sobic001G215400 Sobic001G215400 Sobic003G289400 Sobic003G289400 Sobic001G215400--Sobic003G289400 Sobic009G151200 Sobic009G151200 Sobic001G215400--Sobic009G151200 Sobic010G235600 Sobic010G235600 Sobic001G215400--Sobic010G235600 Sobic008G058800 Sobic008G058800 Sobic001G215400--Sobic008G058800 Sobic001G246500 Sobic001G246500 Sobic001G215400--Sobic001G246500 Sobic009G137100 Sobic009G137100 Sobic001G215400--Sobic009G137100 Sobic008G127400 Sobic008G127400 Sobic001G215400--Sobic008G127400 Sobic007G026000 Sobic007G026000 Sobic001G215400--Sobic007G026000 Sobic009G195200 Sobic009G195200 Sobic001G215400--Sobic009G195200 Sobic006G173100 Sobic006G173100 Sobic003G289400--Sobic006G173100 Sobic007G118200 Sobic007G118200 Sobic003G289400--Sobic007G118200 Sobic001G091400 Sobic001G091400 Sobic003G289400--Sobic001G091400 Sobic010G245000 Sobic010G245000 Sobic003G289400--Sobic010G245000 Sobic001G090400 Sobic001G090400 Sobic003G289400--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic003G289400--Sobic003G081000 Sobic006G195700 Sobic006G195700 Sobic003G289400--Sobic006G195700 Sobic008G014500 Sobic008G014500 Sobic003G289400--Sobic008G014500 Sobic001G408700 Sobic001G408700 Sobic003G289400--Sobic001G408700 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic004G156500 Sobic004G156500 Sobic009G151200--Sobic004G156500 Sobic010G235600--Sobic001G215400 Sobic001G425000 Sobic001G425000 Sobic010G235600--Sobic001G425000 Sobic009G017200 Sobic009G017200 Sobic010G235600--Sobic009G017200 Sobic003G417900 Sobic003G417900 Sobic010G235600--Sobic003G417900 Sobic010G235600--Sobic007G026000 Sobic010G235600--Sobic008G058800 Sobic003G205501 Sobic003G205501 Sobic010G235600--Sobic003G205501 Sobic010G202600 Sobic010G202600 Sobic010G235600--Sobic010G202600 Sobic006G130200 Sobic006G130200 Sobic010G235600--Sobic006G130200 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic008G058800--Sobic006G248500 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic008G058800--Sobic007G026000 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic008G173100 Sobic008G173100 Sobic001G246500--Sobic008G173100 Sobic010G096000 Sobic010G096000 Sobic001G246500--Sobic010G096000 Sobic009G074700 Sobic009G074700 Sobic001G246500--Sobic009G074700 Sobic001G246500--Sobic002G259800 Sobic001G306900 Sobic001G306900 Sobic001G246500--Sobic001G306900 Sobic001G246500--Sobic009G195200 Sobic001G246500--Sobic004G086200 Sobic006G013500 Sobic006G013500 Sobic001G246500--Sobic006G013500 Sobic001G246500--Sobic009G151200 Sobic004G246100 Sobic004G246100 Sobic009G137100--Sobic004G246100 Sobic002G370900 Sobic002G370900 Sobic009G137100--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic009G137100--Sobic002G197100 Sobic006G281700 Sobic006G281700 Sobic009G137100--Sobic006G281700 Sobic009G137100--Sobic008G127400 Sobic002G299100 Sobic002G299100 Sobic009G137100--Sobic002G299100 Sobic009G137100--Sobic008G058800 Sobic009G137100--Sobic001G215400 Sobic009G137100--Sobic006G173100 Sobic007G027700 Sobic007G027700 Sobic008G127400--Sobic007G027700 Sobic006G267300 Sobic006G267300 Sobic008G127400--Sobic006G267300 Sobic008G127400--Sobic003G205501 Sobic006G065800 Sobic006G065800 Sobic008G127400--Sobic006G065800 Sobic004G246700 Sobic004G246700 Sobic008G127400--Sobic004G246700 Sobic008G127400--Sobic008G058800 Sobic002G423200 Sobic002G423200 Sobic008G127400--Sobic002G423200 Sobic008G127400--Sobic006G248500 Sobic010G033400 Sobic010G033400 Sobic008G127400--Sobic010G033400 Sobic008G153000 Sobic008G153000 Sobic007G026000--Sobic008G153000 Sobic006G046700 Sobic006G046700 Sobic007G026000--Sobic006G046700 Sobic005G059100 Sobic005G059100 Sobic007G026000--Sobic005G059100 Sobic003G445400 Sobic003G445400 Sobic007G026000--Sobic003G445400 Sobic009G119000 Sobic009G119000 Sobic007G026000--Sobic009G119000 Sobic002G153700 Sobic002G153700 Sobic007G026000--Sobic002G153700 Sobic001G206100 Sobic001G206100 Sobic007G026000--Sobic001G206100 Sobic007G026000--Sobic006G013500 Sobic004G031700 Sobic004G031700 Sobic007G026000--Sobic004G031700 Sobic009G195200--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic009G195200--Sobic003G433500 Sobic009G195200--Sobic006G267300 Sobic009G195200--Sobic002G264200 Sobic009G195200--Sobic001G246500 Sobic003G355000 Sobic003G355000 Sobic009G195200--Sobic003G355000 Sobic007G091600 Sobic007G091600 Sobic009G195200--Sobic007G091600 Sobic009G195200--Sobic001G306900 Sobic001G226000 Sobic001G226000 Sobic009G195200--Sobic001G226000
Octagon: transcription factors


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