Gene annotation
Transcriptome id Sobic.002G201000.1
Synonym Sb02g024640, ATMYBCP70, MYB94, ATMYB94
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt A0A1B6QCI4
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF554
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28910 : myb domain protein 30
RAP-DB (Rice) LOC_Os08g33940.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a052072 , Zm00025a020817 , Zm00025a020983 , Zm00025a005907 , Zm00025a005909 , Zm00025a032132 , Zm00025a058059 , Zm00025a046969 , Zm00025a053739 , Zm00025a048846 , Zm00025a013922 , Zm00025a015262 , Zm00025a011116 , Zm00025a058060
Brachypodium KQK21499 , KQK00034 , KQJ89518 , KQJ92481 , KQJ98451 , KQJ88197 , KQK19995 , PNT77324 , KQJ90229 , PNT76695
Barley HORVU2Hr1G028470.3 , HORVU2Hr1G028470.2 , HORVU2Hr1G028470.1 , HORVU2Hr1G028470.7 , HORVU2Hr1G028470.6 , HORVU2Hr1G028470.5 , HORVU2Hr1G028470.4 , HORVU5Hr1G045540.3 , HORVU5Hr1G045540.6 , HORVU4Hr1G023510.2 , HORVU4Hr1G023510.1 , HORVU4Hr1G023510.7 , HORVU4Hr1G023510.6 , HORVU4Hr1G023510.5 , HORVU4Hr1G023510.4 , HORVU6Hr1G060650.6 , HORVU6Hr1G060650.2 , HORVU6Hr1G060650.1 , HORVU4Hr1G055640.1 , HORVU5Hr1G045550.8 , HORVU5Hr1G045550.9 , HORVU5Hr1G045550.2 , HORVU5Hr1G045550.3 , HORVU5Hr1G045550.1 , HORVU5Hr1G045550.6 , HORVU5Hr1G045550.7 , HORVU5Hr1G045550.4 , HORVU5Hr1G045550.5 , HORVU5Hr1G045540.1 , HORVU5Hr1G045540.2 , HORVU5Hr1G045540.5 , HORVU5Hr1G045540.4
Wheat TraesCS2B02G343800 , TraesCS5B02G141200 , TraesCS4D02G192400 , TraesCS4D02G123300 , TraesCS4B02G129100 , TraesCS5D02G149600 , TraesCS2D02G163700 , TraesCS5A02G227400 , TraesCS5D02G234800 , TraesCS2A02G157600 , TraesCS6D02G219500 , TraesCS5B02G226100 , TraesCS6B02G265400 , TraesCS5A02G142500 , TraesCS4B02G191200 , TraesCS4A02G189700 , TraesCS6A02G236900 , TraesCS2B02G183100 , TraesCS4A02G113000 , TraesCS2D02G324800 , TraesCS2A02G338200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G037300 membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.005G030400 cytochrome P450, putative, expressed K09588: CYP90A1, cytochrome P450 family 90 subfamily A polypeptide 1
3 Sobic.009G034500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
4 Sobic.002G060450 - -
5 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
7 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
8 Sobic.003G185250 - -
9 Sobic.001G045700 "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA2 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.002G330400 pentatricopeptide, putative, expressed -
11 Sobic.006G263700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.001G522400 FHA domain containing protein, putative, expressed -
13 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
14 Sobic.004G148600 ankyrin, putative, expressed -
15 Sobic.001G252500 expressed protein -
16 Sobic.003G420201 - -
17 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
18 Sobic.001G428000 uncharacterized TPR repeat-containing protein, putative, expressed -
19 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
20 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic002G201000 Sobic002G201000 Sobic006G037300 Sobic006G037300 Sobic002G201000--Sobic006G037300 Sobic005G030400 Sobic005G030400 Sobic002G201000--Sobic005G030400 Sobic009G034500 Sobic009G034500 Sobic002G201000--Sobic009G034500 Sobic002G060450 Sobic002G060450 Sobic002G201000--Sobic002G060450 Sobic001G482300 Sobic001G482300 Sobic002G201000--Sobic001G482300 Sobic006G210200 Sobic006G210200 Sobic002G201000--Sobic006G210200 Sobic003G163100 Sobic003G163100 Sobic002G201000--Sobic003G163100 Sobic003G185250 Sobic003G185250 Sobic002G201000--Sobic003G185250 Sobic001G045700 Sobic001G045700 Sobic002G201000--Sobic001G045700 Sobic006G037300--Sobic002G201000 Sobic006G037300--Sobic005G030400 Sobic006G037300--Sobic009G034500 Sobic001G130700 Sobic001G130700 Sobic006G037300--Sobic001G130700 Sobic003G022200 Sobic003G022200 Sobic006G037300--Sobic003G022200 Sobic006G037300--Sobic001G482300 Sobic001G306700 Sobic001G306700 Sobic006G037300--Sobic001G306700 Sobic007G000400 Sobic007G000400 Sobic006G037300--Sobic007G000400 Sobic006G003951 Sobic006G003951 Sobic006G037300--Sobic006G003951 Sobic005G030400--Sobic006G037300 Sobic001G522400 Sobic001G522400 Sobic005G030400--Sobic001G522400 Sobic005G030400--Sobic007G000400 Sobic005G030400--Sobic002G201000 Sobic006G022500 Sobic006G022500 Sobic005G030400--Sobic006G022500 Sobic004G189700 Sobic004G189700 Sobic005G030400--Sobic004G189700 Sobic007G046900 Sobic007G046900 Sobic005G030400--Sobic007G046900 Sobic006G006500 Sobic006G006500 Sobic005G030400--Sobic006G006500 Sobic006G126600 Sobic006G126600 Sobic005G030400--Sobic006G126600 Sobic009G034500--Sobic006G037300 Sobic009G034500--Sobic002G201000 Sobic006G139300 Sobic006G139300 Sobic009G034500--Sobic006G139300 Sobic001G050300 Sobic001G050300 Sobic009G034500--Sobic001G050300 Sobic006G211000 Sobic006G211000 Sobic009G034500--Sobic006G211000 Sobic003G020300 Sobic003G020300 Sobic009G034500--Sobic003G020300 Sobic008G005600 Sobic008G005600 Sobic009G034500--Sobic008G005600 Sobic003G420201 Sobic003G420201 Sobic009G034500--Sobic003G420201 Sobic009G034500--Sobic001G482300 Sobic002G060450--Sobic003G185250 Sobic002G049000 Sobic002G049000 Sobic002G060450--Sobic002G049000 Sobic002G060450--Sobic007G046900 Sobic002G060450--Sobic006G210200 Sobic002G060450--Sobic006G006500 Sobic002G060450--Sobic001G045700 Sobic002G050500 Sobic002G050500 Sobic002G060450--Sobic002G050500 Sobic002G060450--Sobic006G022500 Sobic003G346000 Sobic003G346000 Sobic002G060450--Sobic003G346000 Sobic003G096300 Sobic003G096300 Sobic001G482300--Sobic003G096300 Sobic002G315000 Sobic002G315000 Sobic001G482300--Sobic002G315000 Sobic003G420800 Sobic003G420800 Sobic001G482300--Sobic003G420800 Sobic001G047200 Sobic001G047200 Sobic001G482300--Sobic001G047200 Sobic002G064400 Sobic002G064400 Sobic001G482300--Sobic002G064400 Sobic005G204100 Sobic005G204100 Sobic001G482300--Sobic005G204100 Sobic009G083300 Sobic009G083300 Sobic001G482300--Sobic009G083300 Sobic008G038200 Sobic008G038200 Sobic001G482300--Sobic008G038200 Sobic001G370000 Sobic001G370000 Sobic001G482300--Sobic001G370000 Sobic006G210200--Sobic002G050500 Sobic001G454301 Sobic001G454301 Sobic006G210200--Sobic001G454301 Sobic002G151600 Sobic002G151600 Sobic006G210200--Sobic002G151600 Sobic003G023400 Sobic003G023400 Sobic006G210200--Sobic003G023400 Sobic002G157200 Sobic002G157200 Sobic006G210200--Sobic002G157200 Sobic006G210200--Sobic003G185250 Sobic006G210200--Sobic002G060450 Sobic001G303675 Sobic001G303675 Sobic006G210200--Sobic001G303675 Sobic009G239351 Sobic009G239351 Sobic006G210200--Sobic009G239351 Sobic006G210100 Sobic006G210100 Sobic003G163100--Sobic006G210100 Sobic001G360900 Sobic001G360900 Sobic003G163100--Sobic001G360900 Sobic001G253200 Sobic001G253200 Sobic003G163100--Sobic001G253200 Sobic003G163100--Sobic001G303675 Sobic009G251300 Sobic009G251300 Sobic003G163100--Sobic009G251300 Sobic006G191400 Sobic006G191400 Sobic003G163100--Sobic006G191400 Sobic003G163100--Sobic002G151600 Sobic003G163100--Sobic003G185250 Sobic009G045700 Sobic009G045700 Sobic003G163100--Sobic009G045700 Sobic004G193800 Sobic004G193800 Sobic003G185250--Sobic004G193800 Sobic003G185250--Sobic001G045700 Sobic003G185250--Sobic002G060450 Sobic003G185250--Sobic006G210200 Sobic003G185250--Sobic001G454301 Sobic003G185250--Sobic003G163100 Sobic003G185250--Sobic006G006500 Sobic003G185250--Sobic003G023400 Sobic005G110523 Sobic005G110523 Sobic003G185250--Sobic005G110523 Sobic001G045700--Sobic002G157200 Sobic007G224900 Sobic007G224900 Sobic001G045700--Sobic007G224900 Sobic001G045700--Sobic003G185250 Sobic001G045700--Sobic006G006500 Sobic001G045700--Sobic002G049000 Sobic001G045700--Sobic002G060450 Sobic001G045700--Sobic002G050500 Sobic002G297800 Sobic002G297800 Sobic001G045700--Sobic002G297800 Sobic010G208500 Sobic010G208500 Sobic001G045700--Sobic010G208500
Octagon: transcription factors


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