Gene annotation
Transcriptome id Sobic.003G022200.1
Synonym Sb03g002080, SVB
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5XL39
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os01g11240.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK03268
Barley HORVU3Hr1G028780.1 , HORVU3Hr1G028780.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G189100 expressed protein -
2 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
3 Sobic.007G078300 serine/threonine-protein kinase HT1, putative, expressed -
4 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
5 Sobic.001G041400 PAPA-1-like conserved region family protein, expressed -
6 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
7 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
8 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
9 Sobic.001G033400 protein kinase domain containing protein, expressed -
10 Sobic.005G072400 expressed protein -
11 Sobic.002G059866 - -
12 Sobic.010G270800 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
14 Sobic.002G341100 bromodomain domain containing protein, expressed -
15 Sobic.010G262900 expressed protein -
16 Sobic.002G103700 - -
17 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
18 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
19 Sobic.003G174200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G038900 expressed protein -


Gene co-expression network
sample Sobic003G022200 Sobic003G022200 Sobic010G189100 Sobic010G189100 Sobic003G022200--Sobic010G189100 Sobic001G130700 Sobic001G130700 Sobic003G022200--Sobic001G130700 Sobic007G078300 Sobic007G078300 Sobic003G022200--Sobic007G078300 Sobic003G035500 Sobic003G035500 Sobic003G022200--Sobic003G035500 Sobic001G041400 Sobic001G041400 Sobic003G022200--Sobic001G041400 Sobic002G253600 Sobic002G253600 Sobic003G022200--Sobic002G253600 Sobic002G016900 Sobic002G016900 Sobic003G022200--Sobic002G016900 Sobic006G278200 Sobic006G278200 Sobic003G022200--Sobic006G278200 Sobic001G033400 Sobic001G033400 Sobic003G022200--Sobic001G033400 Sobic010G189100--Sobic003G035500 Sobic010G189100--Sobic003G022200 Sobic010G189100--Sobic001G033400 Sobic009G257500 Sobic009G257500 Sobic010G189100--Sobic009G257500 Sobic006G126600 Sobic006G126600 Sobic010G189100--Sobic006G126600 Sobic010G189100--Sobic007G078300 Sobic010G262900 Sobic010G262900 Sobic010G189100--Sobic010G262900 Sobic008G156200 Sobic008G156200 Sobic010G189100--Sobic008G156200 Sobic002G341100 Sobic002G341100 Sobic010G189100--Sobic002G341100 Sobic001G130700--Sobic003G022200 Sobic001G130700--Sobic009G257500 Sobic001G130700--Sobic008G156200 Sobic001G130700--Sobic002G253600 Sobic007G209000 Sobic007G209000 Sobic001G130700--Sobic007G209000 Sobic005G072400 Sobic005G072400 Sobic001G130700--Sobic005G072400 Sobic001G384600 Sobic001G384600 Sobic001G130700--Sobic001G384600 Sobic006G203200 Sobic006G203200 Sobic001G130700--Sobic006G203200 Sobic006G037300 Sobic006G037300 Sobic001G130700--Sobic006G037300 Sobic008G013000 Sobic008G013000 Sobic007G078300--Sobic008G013000 Sobic010G152200 Sobic010G152200 Sobic007G078300--Sobic010G152200 Sobic009G022700 Sobic009G022700 Sobic007G078300--Sobic009G022700 Sobic003G105600 Sobic003G105600 Sobic007G078300--Sobic003G105600 Sobic009G013400 Sobic009G013400 Sobic007G078300--Sobic009G013400 Sobic002G077600 Sobic002G077600 Sobic007G078300--Sobic002G077600 Sobic009G009900 Sobic009G009900 Sobic007G078300--Sobic009G009900 Sobic002G077500 Sobic002G077500 Sobic007G078300--Sobic002G077500 Sobic001G326000 Sobic001G326000 Sobic007G078300--Sobic001G326000 Sobic003G035500--Sobic001G033400 Sobic003G035500--Sobic008G156200 Sobic003G035500--Sobic007G078300 Sobic003G035500--Sobic010G189100 Sobic002G247300 Sobic002G247300 Sobic003G035500--Sobic002G247300 Sobic010G207400 Sobic010G207400 Sobic003G035500--Sobic010G207400 Sobic003G174200 Sobic003G174200 Sobic003G035500--Sobic003G174200 Sobic003G412200 Sobic003G412200 Sobic003G035500--Sobic003G412200 Sobic007G091200 Sobic007G091200 Sobic003G035500--Sobic007G091200 Sobic001G041400--Sobic007G078300 Sobic001G041400--Sobic002G341100 Sobic001G041400--Sobic001G033400 Sobic001G042800 Sobic001G042800 Sobic001G041400--Sobic001G042800 Sobic001G041400--Sobic003G022200 Sobic004G329800 Sobic004G329800 Sobic001G041400--Sobic004G329800 Sobic001G041400--Sobic003G035500 Sobic001G041400--Sobic010G152200 Sobic002G067800 Sobic002G067800 Sobic001G041400--Sobic002G067800 Sobic002G253600--Sobic005G072400 Sobic002G253600--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic002G253600--Sobic003G244700 Sobic009G126800 Sobic009G126800 Sobic002G253600--Sobic009G126800 Sobic002G253600--Sobic006G203200 Sobic002G253600--Sobic008G156200 Sobic002G253600--Sobic006G278200 Sobic002G253600--Sobic003G022200 Sobic003G415100 Sobic003G415100 Sobic002G253600--Sobic003G415100 Sobic002G059866 Sobic002G059866 Sobic002G016900--Sobic002G059866 Sobic002G016900--Sobic006G203200 Sobic002G016900--Sobic002G253600 Sobic002G016900--Sobic008G156200 Sobic002G016900--Sobic003G174200 Sobic010G270800 Sobic010G270800 Sobic002G016900--Sobic010G270800 Sobic002G016900--Sobic003G022200 Sobic002G016900--Sobic003G244700 Sobic002G016900--Sobic003G035500 Sobic002G095700 Sobic002G095700 Sobic006G278200--Sobic002G095700 Sobic008G073000 Sobic008G073000 Sobic006G278200--Sobic008G073000 Sobic006G278200--Sobic005G072400 Sobic005G030300 Sobic005G030300 Sobic006G278200--Sobic005G030300 Sobic001G202266 Sobic001G202266 Sobic006G278200--Sobic001G202266 Sobic006G278200--Sobic002G341100 Sobic009G137900 Sobic009G137900 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic006G278200--Sobic002G067800 Sobic001G033400--Sobic003G035500 Sobic001G033400--Sobic002G341100 Sobic001G033400--Sobic010G207400 Sobic001G033400--Sobic001G041400 Sobic001G033400--Sobic007G078300 Sobic003G004500 Sobic003G004500 Sobic001G033400--Sobic003G004500 Sobic001G033400--Sobic010G189100 Sobic005G050600 Sobic005G050600 Sobic001G033400--Sobic005G050600 Sobic002G403200 Sobic002G403200 Sobic001G033400--Sobic002G403200
Octagon: transcription factors


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