Gene annotation
Transcriptome id Sobic.002G103700.1
Synonym
Functional annotation -
UniProt A0A1B6QAC8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G103700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G400400 choline transporter-related, putative, expressed -
2 Sobic.005G180800 thioredoxin domain-containing protein 9, putative, expressed -
3 Sobic.003G022200 DUF538 domain containing protein, putative, expressed -
4 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
5 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
6 Sobic.001G218200 expressed protein -
7 Sobic.007G078300 serine/threonine-protein kinase HT1, putative, expressed -
8 Sobic.001G129500 - -
9 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
10 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
11 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
12 Sobic.007G209000 expressed protein -
13 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
14 Sobic.001G033400 protein kinase domain containing protein, expressed -
15 Sobic.002G059866 - -
16 Sobic.009G194700 IQ calmodulin-binding motif family protein, putative, expressed -
17 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.010G262900 expressed protein -
19 Sobic.010G189100 expressed protein -
20 Sobic.009G013400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -


Gene co-expression network
sample Sobic002G103700 Sobic002G103700 Sobic002G400400 Sobic002G400400 Sobic002G103700--Sobic002G400400 Sobic005G180800 Sobic005G180800 Sobic002G103700--Sobic005G180800 Sobic003G022200 Sobic003G022200 Sobic002G103700--Sobic003G022200 Sobic005G032400 Sobic005G032400 Sobic002G103700--Sobic005G032400 Sobic003G415100 Sobic003G415100 Sobic002G103700--Sobic003G415100 Sobic001G218200 Sobic001G218200 Sobic002G103700--Sobic001G218200 Sobic007G078300 Sobic007G078300 Sobic002G103700--Sobic007G078300 Sobic001G129500 Sobic001G129500 Sobic002G103700--Sobic001G129500 Sobic007G155900 Sobic007G155900 Sobic002G103700--Sobic007G155900 Sobic001G033400 Sobic001G033400 Sobic002G400400--Sobic001G033400 Sobic002G400400--Sobic002G103700 Sobic003G436500 Sobic003G436500 Sobic002G400400--Sobic003G436500 Sobic008G160500 Sobic008G160500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic003G159500 Sobic003G159500 Sobic002G400400--Sobic003G159500 Sobic007G050300 Sobic007G050300 Sobic002G400400--Sobic007G050300 Sobic010G207400 Sobic010G207400 Sobic002G400400--Sobic010G207400 Sobic001G039500 Sobic001G039500 Sobic002G400400--Sobic001G039500 Sobic005G180800--Sobic003G415100 Sobic005G180800--Sobic002G103700 Sobic005G180800--Sobic001G218200 Sobic006G261100 Sobic006G261100 Sobic005G180800--Sobic006G261100 Sobic009G166200 Sobic009G166200 Sobic005G180800--Sobic009G166200 Sobic004G313300 Sobic004G313300 Sobic005G180800--Sobic004G313300 Sobic001G384600 Sobic001G384600 Sobic005G180800--Sobic001G384600 Sobic005G180800--Sobic005G032400 Sobic002G247200 Sobic002G247200 Sobic005G180800--Sobic002G247200 Sobic010G189100 Sobic010G189100 Sobic003G022200--Sobic010G189100 Sobic001G130700 Sobic001G130700 Sobic003G022200--Sobic001G130700 Sobic003G022200--Sobic007G078300 Sobic003G035500 Sobic003G035500 Sobic003G022200--Sobic003G035500 Sobic001G041400 Sobic001G041400 Sobic003G022200--Sobic001G041400 Sobic002G253600 Sobic002G253600 Sobic003G022200--Sobic002G253600 Sobic002G016900 Sobic002G016900 Sobic003G022200--Sobic002G016900 Sobic006G278200 Sobic006G278200 Sobic003G022200--Sobic006G278200 Sobic003G022200--Sobic001G033400 Sobic003G004500 Sobic003G004500 Sobic005G032400--Sobic003G004500 Sobic010G262900 Sobic010G262900 Sobic005G032400--Sobic010G262900 Sobic005G032400--Sobic003G415100 Sobic001G053700 Sobic001G053700 Sobic005G032400--Sobic001G053700 Sobic002G403200 Sobic002G403200 Sobic005G032400--Sobic002G403200 Sobic005G050600 Sobic005G050600 Sobic005G032400--Sobic005G050600 Sobic009G156200 Sobic009G156200 Sobic005G032400--Sobic009G156200 Sobic010G180200 Sobic010G180200 Sobic005G032400--Sobic010G180200 Sobic008G045800 Sobic008G045800 Sobic005G032400--Sobic008G045800 Sobic001G346700 Sobic001G346700 Sobic003G415100--Sobic001G346700 Sobic009G069200 Sobic009G069200 Sobic003G415100--Sobic009G069200 Sobic002G390400 Sobic002G390400 Sobic003G415100--Sobic002G390400 Sobic009G257500 Sobic009G257500 Sobic003G415100--Sobic009G257500 Sobic001G090300 Sobic001G090300 Sobic003G415100--Sobic001G090300 Sobic001G123201 Sobic001G123201 Sobic003G415100--Sobic001G123201 Sobic006G126600 Sobic006G126600 Sobic003G415100--Sobic006G126600 Sobic006G091850 Sobic006G091850 Sobic003G415100--Sobic006G091850 Sobic003G253400 Sobic003G253400 Sobic003G415100--Sobic003G253400 Sobic001G116100 Sobic001G116100 Sobic001G218200--Sobic001G116100 Sobic001G218200--Sobic006G261100 Sobic001G218200--Sobic005G180800 Sobic002G362300 Sobic002G362300 Sobic001G218200--Sobic002G362300 Sobic001G218200--Sobic002G103700 Sobic004G256200 Sobic004G256200 Sobic001G218200--Sobic004G256200 Sobic005G030300 Sobic005G030300 Sobic001G218200--Sobic005G030300 Sobic002G347700 Sobic002G347700 Sobic001G218200--Sobic002G347700 Sobic001G218200--Sobic007G155900 Sobic008G013000 Sobic008G013000 Sobic007G078300--Sobic008G013000 Sobic010G152200 Sobic010G152200 Sobic007G078300--Sobic010G152200 Sobic009G022700 Sobic009G022700 Sobic007G078300--Sobic009G022700 Sobic003G105600 Sobic003G105600 Sobic007G078300--Sobic003G105600 Sobic009G013400 Sobic009G013400 Sobic007G078300--Sobic009G013400 Sobic002G077600 Sobic002G077600 Sobic007G078300--Sobic002G077600 Sobic009G009900 Sobic009G009900 Sobic007G078300--Sobic009G009900 Sobic002G077500 Sobic002G077500 Sobic007G078300--Sobic002G077500 Sobic001G326000 Sobic001G326000 Sobic007G078300--Sobic001G326000 Sobic001G129500--Sobic008G013000 Sobic001G129500--Sobic007G078300 Sobic001G129500--Sobic002G103700 Sobic001G368900 Sobic001G368900 Sobic001G129500--Sobic001G368900 Sobic009G090100 Sobic009G090100 Sobic001G129500--Sobic009G090100 Sobic001G129500--Sobic009G013400 Sobic009G227000 Sobic009G227000 Sobic001G129500--Sobic009G227000 Sobic001G129500--Sobic010G207400 Sobic010G216800 Sobic010G216800 Sobic001G129500--Sobic010G216800 Sobic007G216900 Sobic007G216900 Sobic007G155900--Sobic007G216900 Sobic007G155900--Sobic002G347700 Sobic002G341100 Sobic002G341100 Sobic007G155900--Sobic002G341100 Sobic001G063100 Sobic001G063100 Sobic007G155900--Sobic001G063100 Sobic002G067800 Sobic002G067800 Sobic007G155900--Sobic002G067800 Sobic006G120400 Sobic006G120400 Sobic007G155900--Sobic006G120400 Sobic002G164400 Sobic002G164400 Sobic007G155900--Sobic002G164400 Sobic008G165100 Sobic008G165100 Sobic007G155900--Sobic008G165100 Sobic002G095700 Sobic002G095700 Sobic007G155900--Sobic002G095700
Octagon: transcription factors


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