Gene annotation
Transcriptome id Sobic.001G218200.2,Sobic.001G218200.3,Sobic.001G218200.1
Synonym Sb01g019190
Functional annotation expressed protein
UniProt A0A1Z5S6T2 , A0A1B6QK84
Pfam -
Panther DB PTHR35755 PTHR35755:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10745 : -
RAP-DB (Rice) LOC_Os10g33855.2,LOC_Os10g33855.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G218200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G116100 threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed K01754: E4.3.1.19, ilvA, threonine dehydratase
2 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
3 Sobic.005G180800 thioredoxin domain-containing protein 9, putative, expressed -
4 Sobic.002G362300 prefoldin, putative, expressed -
5 Sobic.002G103700 - -
6 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.005G030300 protein kinase PKN/PRK1, effector, putative, expressed -
8 Sobic.002G347700 expressed protein -
9 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
10 Sobic.008G073000 expressed protein -
11 Sobic.007G130300 ES43 protein, putative, expressed -
12 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
13 Sobic.001G063100 DUF593 domain containing protein, expressed -
14 Sobic.007G097700 DUF593 domain containing protein, expressed -
15 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
16 Sobic.004G313300 expressed protein -
17 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G148600 ankyrin, putative, expressed -
19 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
20 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase


Gene co-expression network
sample Sobic001G218200 Sobic001G218200 Sobic001G116100 Sobic001G116100 Sobic001G218200--Sobic001G116100 Sobic006G261100 Sobic006G261100 Sobic001G218200--Sobic006G261100 Sobic005G180800 Sobic005G180800 Sobic001G218200--Sobic005G180800 Sobic002G362300 Sobic002G362300 Sobic001G218200--Sobic002G362300 Sobic002G103700 Sobic002G103700 Sobic001G218200--Sobic002G103700 Sobic004G256200 Sobic004G256200 Sobic001G218200--Sobic004G256200 Sobic005G030300 Sobic005G030300 Sobic001G218200--Sobic005G030300 Sobic002G347700 Sobic002G347700 Sobic001G218200--Sobic002G347700 Sobic007G155900 Sobic007G155900 Sobic001G218200--Sobic007G155900 Sobic001G116100--Sobic001G218200 Sobic002G095700 Sobic002G095700 Sobic001G116100--Sobic002G095700 Sobic003G354100 Sobic003G354100 Sobic001G116100--Sobic003G354100 Sobic007G188900 Sobic007G188900 Sobic001G116100--Sobic007G188900 Sobic002G177400 Sobic002G177400 Sobic001G116100--Sobic002G177400 Sobic001G116100--Sobic002G362300 Sobic001G346700 Sobic001G346700 Sobic001G116100--Sobic001G346700 Sobic008G073000 Sobic008G073000 Sobic001G116100--Sobic008G073000 Sobic004G347100 Sobic004G347100 Sobic001G116100--Sobic004G347100 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic006G261100--Sobic003G354100 Sobic003G415100 Sobic003G415100 Sobic005G180800--Sobic003G415100 Sobic005G180800--Sobic002G103700 Sobic005G180800--Sobic001G218200 Sobic005G180800--Sobic006G261100 Sobic009G166200 Sobic009G166200 Sobic005G180800--Sobic009G166200 Sobic004G313300 Sobic004G313300 Sobic005G180800--Sobic004G313300 Sobic001G384600 Sobic001G384600 Sobic005G180800--Sobic001G384600 Sobic005G032400 Sobic005G032400 Sobic005G180800--Sobic005G032400 Sobic002G247200 Sobic002G247200 Sobic005G180800--Sobic002G247200 Sobic005G009200 Sobic005G009200 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic003G433500 Sobic003G433500 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G362300--Sobic002G095700 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic002G400400 Sobic002G400400 Sobic002G103700--Sobic002G400400 Sobic002G103700--Sobic005G180800 Sobic003G022200 Sobic003G022200 Sobic002G103700--Sobic003G022200 Sobic002G103700--Sobic005G032400 Sobic002G103700--Sobic003G415100 Sobic002G103700--Sobic001G218200 Sobic007G078300 Sobic007G078300 Sobic002G103700--Sobic007G078300 Sobic001G129500 Sobic001G129500 Sobic002G103700--Sobic001G129500 Sobic002G103700--Sobic007G155900 Sobic002G341100 Sobic002G341100 Sobic004G256200--Sobic002G341100 Sobic004G256200--Sobic006G261100 Sobic004G256200--Sobic001G116100 Sobic004G250900 Sobic004G250900 Sobic004G256200--Sobic004G250900 Sobic006G120400 Sobic006G120400 Sobic004G256200--Sobic006G120400 Sobic004G256200--Sobic001G218200 Sobic004G256200--Sobic002G276900 Sobic004G256200--Sobic008G073000 Sobic004G256200--Sobic002G095700 Sobic005G030300--Sobic008G073000 Sobic008G165100 Sobic008G165100 Sobic005G030300--Sobic008G165100 Sobic005G030300--Sobic002G095700 Sobic005G030300--Sobic003G433500 Sobic002G045400 Sobic002G045400 Sobic005G030300--Sobic002G045400 Sobic006G278200 Sobic006G278200 Sobic005G030300--Sobic006G278200 Sobic008G101800 Sobic008G101800 Sobic005G030300--Sobic008G101800 Sobic005G030300--Sobic002G362300 Sobic005G030300--Sobic009G022100 Sobic002G347700--Sobic002G362300 Sobic008G129700 Sobic008G129700 Sobic002G347700--Sobic008G129700 Sobic002G347700--Sobic007G155900 Sobic002G347700--Sobic002G177400 Sobic002G347700--Sobic009G044900 Sobic002G347700--Sobic005G030300 Sobic010G202600 Sobic010G202600 Sobic002G347700--Sobic010G202600 Sobic002G224700 Sobic002G224700 Sobic002G347700--Sobic002G224700 Sobic010G211300 Sobic010G211300 Sobic002G347700--Sobic010G211300 Sobic007G216900 Sobic007G216900 Sobic007G155900--Sobic007G216900 Sobic007G155900--Sobic002G347700 Sobic007G155900--Sobic002G341100 Sobic001G063100 Sobic001G063100 Sobic007G155900--Sobic001G063100 Sobic002G067800 Sobic002G067800 Sobic007G155900--Sobic002G067800 Sobic007G155900--Sobic006G120400 Sobic002G164400 Sobic002G164400 Sobic007G155900--Sobic002G164400 Sobic007G155900--Sobic008G165100 Sobic007G155900--Sobic002G095700
Octagon: transcription factors


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