Gene annotation
Transcriptome id Sobic.004G313300.1
Synonym
Functional annotation expressed protein
UniProt C5XTG7
Pfam -
Panther DB PTHR34553
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32970 : -
RAP-DB (Rice) LOC_Os02g53210.4 : expressed protein
MaizeGDB (Corn) Zm00025a057934 , Zm00025a022262
Brachypodium KQK01694
Barley -
Wheat TraesCS6B02G355500 , TraesCS6B02G355500 , TraesCS6B02G355500 , TraesCS6B02G355500 , TraesCS6B02G355500 , TraesCS6B02G355500 , TraesCS6D02G304900 , TraesCS6D02G304900 , TraesCS6A02G325200 , TraesCS6A02G325200
Populus -


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cDNA sequences
Sobic.004G313300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.010G063300 protein kinase domain containing protein, expressed -
3 Sobic.006G224300 APO, putative, expressed -
4 Sobic.003G070700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
6 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
7 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
8 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
9 Sobic.004G152000 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.007G174900 carrier, putative, expressed -
11 Sobic.009G059400 expressed protein -
12 Sobic.005G180800 thioredoxin domain-containing protein 9, putative, expressed -
13 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
14 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.005G049000 transcription elongation factor protein, putative, expressed -
16 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
17 Sobic.006G222500 expressed protein -
18 Sobic.004G145600 expressed protein -
19 Sobic.010G237650 - -
20 Sobic.009G069200 glycine-rich protein, putative, expressed -


Gene co-expression network
sample Sobic004G313300 Sobic004G313300 Sobic006G144000 Sobic006G144000 Sobic004G313300--Sobic006G144000 Sobic010G063300 Sobic010G063300 Sobic004G313300--Sobic010G063300 Sobic006G224300 Sobic006G224300 Sobic004G313300--Sobic006G224300 Sobic003G070700 Sobic003G070700 Sobic004G313300--Sobic003G070700 Sobic004G353400 Sobic004G353400 Sobic004G313300--Sobic004G353400 Sobic009G125000 Sobic009G125000 Sobic004G313300--Sobic009G125000 Sobic005G040900 Sobic005G040900 Sobic004G313300--Sobic005G040900 Sobic005G198200 Sobic005G198200 Sobic004G313300--Sobic005G198200 Sobic004G152000 Sobic004G152000 Sobic004G313300--Sobic004G152000 Sobic001G017200 Sobic001G017200 Sobic006G144000--Sobic001G017200 Sobic009G017200 Sobic009G017200 Sobic006G144000--Sobic009G017200 Sobic009G059400 Sobic009G059400 Sobic006G144000--Sobic009G059400 Sobic010G237650 Sobic010G237650 Sobic006G144000--Sobic010G237650 Sobic004G180900 Sobic004G180900 Sobic006G144000--Sobic004G180900 Sobic004G116600 Sobic004G116600 Sobic006G144000--Sobic004G116600 Sobic006G130200 Sobic006G130200 Sobic006G144000--Sobic006G130200 Sobic006G144000--Sobic004G313300 Sobic001G425000 Sobic001G425000 Sobic006G144000--Sobic001G425000 Sobic010G063300--Sobic003G070700 Sobic003G336800 Sobic003G336800 Sobic010G063300--Sobic003G336800 Sobic010G063300--Sobic006G130200 Sobic006G141800 Sobic006G141800 Sobic010G063300--Sobic006G141800 Sobic010G063300--Sobic004G313300 Sobic010G063300--Sobic004G152000 Sobic010G063300--Sobic006G144000 Sobic010G174800 Sobic010G174800 Sobic010G063300--Sobic010G174800 Sobic009G000400 Sobic009G000400 Sobic010G063300--Sobic009G000400 Sobic008G021000 Sobic008G021000 Sobic006G224300--Sobic008G021000 Sobic004G084500 Sobic004G084500 Sobic006G224300--Sobic004G084500 Sobic006G224300--Sobic009G059400 Sobic004G345400 Sobic004G345400 Sobic006G224300--Sobic004G345400 Sobic003G394200 Sobic003G394200 Sobic006G224300--Sobic003G394200 Sobic009G040800 Sobic009G040800 Sobic006G224300--Sobic009G040800 Sobic006G224300--Sobic009G017200 Sobic002G115500 Sobic002G115500 Sobic006G224300--Sobic002G115500 Sobic006G203300 Sobic006G203300 Sobic006G224300--Sobic006G203300 Sobic003G070700--Sobic010G063300 Sobic009G022100 Sobic009G022100 Sobic003G070700--Sobic009G022100 Sobic003G070700--Sobic005G198200 Sobic003G070700--Sobic004G313300 Sobic002G002500 Sobic002G002500 Sobic003G070700--Sobic002G002500 Sobic003G070700--Sobic004G152000 Sobic003G070700--Sobic006G141800 Sobic003G070700--Sobic004G353400 Sobic003G343600 Sobic003G343600 Sobic003G070700--Sobic003G343600 Sobic006G091000 Sobic006G091000 Sobic004G353400--Sobic006G091000 Sobic004G353400--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic004G353400--Sobic005G178950 Sobic004G042900 Sobic004G042900 Sobic004G353400--Sobic004G042900 Sobic007G053400 Sobic007G053400 Sobic004G353400--Sobic007G053400 Sobic001G100800 Sobic001G100800 Sobic004G353400--Sobic001G100800 Sobic007G016900 Sobic007G016900 Sobic004G353400--Sobic007G016900 Sobic004G353400--Sobic006G144000 Sobic002G299100 Sobic002G299100 Sobic004G353400--Sobic002G299100 Sobic009G125000--Sobic009G059400 Sobic009G125000--Sobic004G345400 Sobic001G472100 Sobic001G472100 Sobic009G125000--Sobic001G472100 Sobic009G125000--Sobic004G180900 Sobic009G125000--Sobic005G040900 Sobic001G042200 Sobic001G042200 Sobic009G125000--Sobic001G042200 Sobic009G125000--Sobic009G040800 Sobic003G062400 Sobic003G062400 Sobic009G125000--Sobic003G062400 Sobic009G125000--Sobic005G198200 Sobic005G040900--Sobic009G040800 Sobic005G040900--Sobic006G091000 Sobic004G347100 Sobic004G347100 Sobic005G040900--Sobic004G347100 Sobic007G139400 Sobic007G139400 Sobic005G040900--Sobic007G139400 Sobic010G074900 Sobic010G074900 Sobic005G040900--Sobic010G074900 Sobic003G205501 Sobic003G205501 Sobic005G040900--Sobic003G205501 Sobic005G040900--Sobic004G345400 Sobic005G040900--Sobic001G472100 Sobic009G129600 Sobic009G129600 Sobic005G040900--Sobic009G129600 Sobic005G198200--Sobic009G059400 Sobic009G113100 Sobic009G113100 Sobic005G198200--Sobic009G113100 Sobic009G137900 Sobic009G137900 Sobic005G198200--Sobic009G137900 Sobic005G072400 Sobic005G072400 Sobic005G198200--Sobic005G072400 Sobic005G198200--Sobic009G017200 Sobic005G198200--Sobic001G472100 Sobic008G111800 Sobic008G111800 Sobic005G198200--Sobic008G111800 Sobic005G198200--Sobic004G180900 Sobic010G077500 Sobic010G077500 Sobic005G198200--Sobic010G077500 Sobic004G152000--Sobic010G174800 Sobic003G389800 Sobic003G389800 Sobic004G152000--Sobic003G389800 Sobic004G152000--Sobic010G063300 Sobic001G390500 Sobic001G390500 Sobic004G152000--Sobic001G390500 Sobic002G121000 Sobic002G121000 Sobic004G152000--Sobic002G121000 Sobic002G088700 Sobic002G088700 Sobic004G152000--Sobic002G088700 Sobic001G061700 Sobic001G061700 Sobic004G152000--Sobic001G061700 Sobic003G248500 Sobic003G248500 Sobic004G152000--Sobic003G248500 Sobic003G084750 Sobic003G084750 Sobic004G152000--Sobic003G084750
Octagon: transcription factors


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