Gene annotation
Transcriptome id Sobic.010G063300.2
Synonym Sb10g005460
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1W0VRQ4 , C6JSS2
Pfam PF07714
Panther DB PTHR23257 PTHR23257:SF547
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G46920 : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RAP-DB (Rice) LOC_Os06g08280.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041089 , Zm00025a049801
Brachypodium KQK19313 , KQK19312 , KQK19314
Barley HORVU7Hr1G029750.13 , HORVU7Hr1G029750.10 , HORVU7Hr1G029750.11 , HORVU7Hr1G029750.1 , HORVU7Hr1G029750.2 , HORVU7Hr1G029750.3 , HORVU7Hr1G029750.4 , HORVU7Hr1G029750.5 , HORVU7Hr1G029750.6 , HORVU7Hr1G029750.7 , HORVU7Hr1G029750.8 , HORVU7Hr1G029750.9 , HORVU7Hr1G029750.12 , HORVU7Hr1G029750.14
Wheat TraesCS7D02G146400 , TraesCS7D02G146400 , TraesCS7D02G146400 , TraesCS7B02G047300 , TraesCS7B02G047300 , TraesCS7B02G047300 , TraesCS7B02G047300 , TraesCS7A02G145100 , TraesCS7A02G145100 , TraesCS7A02G145100 , TraesCS7A02G145100 , TraesCS7A02G145100 , TraesCS7A02G145100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G070700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G336800 expressed protein -
3 Sobic.006G130200 expressed protein -
4 Sobic.006G141800 expressed protein -
5 Sobic.004G313300 expressed protein -
6 Sobic.004G152000 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
9 Sobic.009G000400 expressed protein -
10 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
11 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
12 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
13 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
14 Sobic.003G205501 - -
15 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
16 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
17 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
18 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
19 Sobic.007G026000 ATBET9, putative, expressed -
20 Sobic.009G137900 OsFBL9 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic010G063300 Sobic010G063300 Sobic003G070700 Sobic003G070700 Sobic010G063300--Sobic003G070700 Sobic003G336800 Sobic003G336800 Sobic010G063300--Sobic003G336800 Sobic006G130200 Sobic006G130200 Sobic010G063300--Sobic006G130200 Sobic006G141800 Sobic006G141800 Sobic010G063300--Sobic006G141800 Sobic004G313300 Sobic004G313300 Sobic010G063300--Sobic004G313300 Sobic004G152000 Sobic004G152000 Sobic010G063300--Sobic004G152000 Sobic006G144000 Sobic006G144000 Sobic010G063300--Sobic006G144000 Sobic010G174800 Sobic010G174800 Sobic010G063300--Sobic010G174800 Sobic009G000400 Sobic009G000400 Sobic010G063300--Sobic009G000400 Sobic003G070700--Sobic010G063300 Sobic009G022100 Sobic009G022100 Sobic003G070700--Sobic009G022100 Sobic005G198200 Sobic005G198200 Sobic003G070700--Sobic005G198200 Sobic003G070700--Sobic004G313300 Sobic002G002500 Sobic002G002500 Sobic003G070700--Sobic002G002500 Sobic003G070700--Sobic004G152000 Sobic003G070700--Sobic006G141800 Sobic004G353400 Sobic004G353400 Sobic003G070700--Sobic004G353400 Sobic003G343600 Sobic003G343600 Sobic003G070700--Sobic003G343600 Sobic004G088400 Sobic004G088400 Sobic003G336800--Sobic004G088400 Sobic008G129700 Sobic008G129700 Sobic003G336800--Sobic008G129700 Sobic002G061400 Sobic002G061400 Sobic003G336800--Sobic002G061400 Sobic003G336800--Sobic010G174800 Sobic001G296500 Sobic001G296500 Sobic003G336800--Sobic001G296500 Sobic010G202600 Sobic010G202600 Sobic003G336800--Sobic010G202600 Sobic010G199800 Sobic010G199800 Sobic003G336800--Sobic010G199800 Sobic006G128800 Sobic006G128800 Sobic003G336800--Sobic006G128800 Sobic007G008800 Sobic007G008800 Sobic003G336800--Sobic007G008800 Sobic006G130200--Sobic006G128800 Sobic004G218300 Sobic004G218300 Sobic006G130200--Sobic004G218300 Sobic006G130200--Sobic010G174800 Sobic009G032300 Sobic009G032300 Sobic006G130200--Sobic009G032300 Sobic003G398400 Sobic003G398400 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic006G130200--Sobic006G092800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000 Sobic006G141800--Sobic010G063300 Sobic009G228400 Sobic009G228400 Sobic006G141800--Sobic009G228400 Sobic001G321900 Sobic001G321900 Sobic006G141800--Sobic001G321900 Sobic006G215100 Sobic006G215100 Sobic006G141800--Sobic006G215100 Sobic010G073600 Sobic010G073600 Sobic006G141800--Sobic010G073600 Sobic006G141800--Sobic006G130200 Sobic006G141800--Sobic003G070700 Sobic002G147100 Sobic002G147100 Sobic006G141800--Sobic002G147100 Sobic010G074900 Sobic010G074900 Sobic006G141800--Sobic010G074900 Sobic004G313300--Sobic006G144000 Sobic004G313300--Sobic010G063300 Sobic006G224300 Sobic006G224300 Sobic004G313300--Sobic006G224300 Sobic004G313300--Sobic003G070700 Sobic004G313300--Sobic004G353400 Sobic009G125000 Sobic009G125000 Sobic004G313300--Sobic009G125000 Sobic005G040900 Sobic005G040900 Sobic004G313300--Sobic005G040900 Sobic004G313300--Sobic005G198200 Sobic004G313300--Sobic004G152000 Sobic004G152000--Sobic010G174800 Sobic003G389800 Sobic003G389800 Sobic004G152000--Sobic003G389800 Sobic004G152000--Sobic010G063300 Sobic001G390500 Sobic001G390500 Sobic004G152000--Sobic001G390500 Sobic002G121000 Sobic002G121000 Sobic004G152000--Sobic002G121000 Sobic002G088700 Sobic002G088700 Sobic004G152000--Sobic002G088700 Sobic001G061700 Sobic001G061700 Sobic004G152000--Sobic001G061700 Sobic003G248500 Sobic003G248500 Sobic004G152000--Sobic003G248500 Sobic003G084750 Sobic003G084750 Sobic004G152000--Sobic003G084750 Sobic001G017200 Sobic001G017200 Sobic006G144000--Sobic001G017200 Sobic009G017200 Sobic009G017200 Sobic006G144000--Sobic009G017200 Sobic009G059400 Sobic009G059400 Sobic006G144000--Sobic009G059400 Sobic010G237650 Sobic010G237650 Sobic006G144000--Sobic010G237650 Sobic004G180900 Sobic004G180900 Sobic006G144000--Sobic004G180900 Sobic004G116600 Sobic004G116600 Sobic006G144000--Sobic004G116600 Sobic006G144000--Sobic006G130200 Sobic006G144000--Sobic004G313300 Sobic006G144000--Sobic001G425000 Sobic010G174800--Sobic003G248500 Sobic010G174800--Sobic006G128800 Sobic003G185200 Sobic003G185200 Sobic010G174800--Sobic003G185200 Sobic003G359300 Sobic003G359300 Sobic010G174800--Sobic003G359300 Sobic010G174800--Sobic006G130200 Sobic010G174800--Sobic003G336800 Sobic004G263900 Sobic004G263900 Sobic010G174800--Sobic004G263900 Sobic010G174800--Sobic001G390500 Sobic001G028400 Sobic001G028400 Sobic010G174800--Sobic001G028400 Sobic009G074700 Sobic009G074700 Sobic009G000400--Sobic009G074700 Sobic006G028700 Sobic006G028700 Sobic009G000400--Sobic006G028700 Sobic009G040800 Sobic009G040800 Sobic009G000400--Sobic009G040800 Sobic006G180700 Sobic006G180700 Sobic009G000400--Sobic006G180700 Sobic002G115500 Sobic002G115500 Sobic009G000400--Sobic002G115500 Sobic007G026000 Sobic007G026000 Sobic009G000400--Sobic007G026000 Sobic009G000400--Sobic005G040900 Sobic010G279900 Sobic010G279900 Sobic009G000400--Sobic010G279900 Sobic001G085700 Sobic001G085700 Sobic009G000400--Sobic001G085700
Octagon: transcription factors


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