Gene annotation
Transcriptome id Sobic.006G091000.2,Sobic.006G091000.1
Synonym Sb06g017610
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt A0A1B6PL43 , A0A1B6PL57
Pfam PF12697
Panther DB PTHR14189
NCBI CDD KOG2564; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
KEGG Orthology K13617; protein phosphatase methylesterase 1
Gene Ontology GO:0006482; protein demethylation


Orthologs (automatic annotation)
TAIR AT4G10050 : esterase/lipase/thioesterase family protein
RAP-DB (Rice) LOC_Os04g36620.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a011268
Brachypodium KQJ82837 , PNT61178
Barley -
Wheat TraesCS2B02G327500 , TraesCS2D02G308700 , TraesCS2A02G310400
Populus -


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cDNA sequences
Sobic.006G091000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
2 Sobic.005G178950 - -
3 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
4 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
5 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
6 Sobic.010G074900 G protein coupled receptor, putative, expressed -
7 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
8 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
9 Sobic.005G114400 TBC domain containing protein, expressed -
10 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
11 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
12 Sobic.009G151200 expressed protein -
13 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
14 Sobic.009G000400 expressed protein -
15 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
16 Sobic.007G212800 frataxin, putative, expressed K19054: frataxin
17 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
18 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
19 Sobic.002G115500 PHD finger protein, putative, expressed -
20 Sobic.006G142400 suppressor of stem-loop protein 1, putative, expressed K03142: TFIIH2, GTF2H2, transcription initiation factor TFIIH subunit 2


Gene co-expression network
sample Sobic006G091000 Sobic006G091000 Sobic009G040800 Sobic009G040800 Sobic006G091000--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic006G091000--Sobic005G178950 Sobic004G353400 Sobic004G353400 Sobic006G091000--Sobic004G353400 Sobic005G040900 Sobic005G040900 Sobic006G091000--Sobic005G040900 Sobic004G347100 Sobic004G347100 Sobic006G091000--Sobic004G347100 Sobic010G074900 Sobic010G074900 Sobic006G091000--Sobic010G074900 Sobic007G139400 Sobic007G139400 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic005G114400 Sobic005G114400 Sobic006G091000--Sobic005G114400 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic009G040800--Sobic006G091000 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic009G040800--Sobic004G353400 Sobic005G178950--Sobic006G091000 Sobic005G178950--Sobic001G042200 Sobic005G178950--Sobic009G040800 Sobic007G187600 Sobic007G187600 Sobic005G178950--Sobic007G187600 Sobic002G299100 Sobic002G299100 Sobic005G178950--Sobic002G299100 Sobic007G056500 Sobic007G056500 Sobic005G178950--Sobic007G056500 Sobic010G077500 Sobic010G077500 Sobic005G178950--Sobic010G077500 Sobic005G178950--Sobic010G074900 Sobic009G151200 Sobic009G151200 Sobic005G178950--Sobic009G151200 Sobic004G353400--Sobic006G091000 Sobic004G353400--Sobic009G040800 Sobic004G353400--Sobic005G178950 Sobic004G042900 Sobic004G042900 Sobic004G353400--Sobic004G042900 Sobic007G053400 Sobic007G053400 Sobic004G353400--Sobic007G053400 Sobic001G100800 Sobic001G100800 Sobic004G353400--Sobic001G100800 Sobic007G016900 Sobic007G016900 Sobic004G353400--Sobic007G016900 Sobic006G144000 Sobic006G144000 Sobic004G353400--Sobic006G144000 Sobic004G353400--Sobic002G299100 Sobic005G040900--Sobic009G040800 Sobic005G040900--Sobic006G091000 Sobic005G040900--Sobic004G347100 Sobic005G040900--Sobic007G139400 Sobic005G040900--Sobic010G074900 Sobic003G205501 Sobic003G205501 Sobic005G040900--Sobic003G205501 Sobic004G345400 Sobic004G345400 Sobic005G040900--Sobic004G345400 Sobic001G472100 Sobic001G472100 Sobic005G040900--Sobic001G472100 Sobic005G040900--Sobic009G129600 Sobic004G347100--Sobic007G139400 Sobic006G248500 Sobic006G248500 Sobic004G347100--Sobic006G248500 Sobic004G347100--Sobic006G091000 Sobic009G044900 Sobic009G044900 Sobic004G347100--Sobic009G044900 Sobic004G347100--Sobic005G040900 Sobic004G347100--Sobic009G129600 Sobic004G347100--Sobic009G151200 Sobic004G347100--Sobic009G040800 Sobic003G336800 Sobic003G336800 Sobic004G347100--Sobic003G336800 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic001G193100 Sobic001G193100 Sobic010G074900--Sobic001G193100 Sobic004G084500 Sobic004G084500 Sobic010G074900--Sobic004G084500 Sobic010G074900--Sobic006G091000 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic003G398400 Sobic003G398400 Sobic010G074900--Sobic003G398400 Sobic007G139400--Sobic004G347100 Sobic002G033600 Sobic002G033600 Sobic007G139400--Sobic002G033600 Sobic007G188900 Sobic007G188900 Sobic007G139400--Sobic007G188900 Sobic007G139400--Sobic009G040800 Sobic007G088900 Sobic007G088900 Sobic007G139400--Sobic007G088900 Sobic007G139400--Sobic005G040900 Sobic002G334600 Sobic002G334600 Sobic007G139400--Sobic002G334600 Sobic007G139400--Sobic009G129600 Sobic003G354100 Sobic003G354100 Sobic007G139400--Sobic003G354100 Sobic001G467100 Sobic001G467100 Sobic010G172400--Sobic001G467100 Sobic003G222700 Sobic003G222700 Sobic010G172400--Sobic003G222700 Sobic002G399900 Sobic002G399900 Sobic010G172400--Sobic002G399900 Sobic010G172400--Sobic006G091000 Sobic002G182000 Sobic002G182000 Sobic010G172400--Sobic002G182000 Sobic005G114500 Sobic005G114500 Sobic010G172400--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic010G172400--Sobic001G474400 Sobic001G097900 Sobic001G097900 Sobic010G172400--Sobic001G097900 Sobic001G012900 Sobic001G012900 Sobic010G172400--Sobic001G012900 Sobic003G220700 Sobic003G220700 Sobic005G114400--Sobic003G220700 Sobic007G000800 Sobic007G000800 Sobic005G114400--Sobic007G000800 Sobic002G259800 Sobic002G259800 Sobic005G114400--Sobic002G259800 Sobic001G246500 Sobic001G246500 Sobic005G114400--Sobic001G246500 Sobic005G114400--Sobic009G151200 Sobic002G389800 Sobic002G389800 Sobic005G114400--Sobic002G389800 Sobic005G114400--Sobic006G091000 Sobic001G424600 Sobic001G424600 Sobic005G114400--Sobic001G424600 Sobic005G114400--Sobic004G345700
Octagon: transcription factors


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