Gene annotation
Transcriptome id Sobic.005G178950.2,Sobic.005G178950.1
Synonym -
Functional annotation -
UniProt A0A1Z5RJN0
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF75
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G18780 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g35940.1 : OsFBX135 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
2 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
3 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
4 Sobic.007G187600 pentatricopeptide, putative, expressed -
5 Sobic.002G299100 SET domain containing protein, expressed -
6 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
7 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
8 Sobic.010G074900 G protein coupled receptor, putative, expressed -
9 Sobic.009G151200 expressed protein -
10 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
11 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
12 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
13 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
14 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
15 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
16 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
17 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
18 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
19 Sobic.006G049100 expressed protein -
20 Sobic.009G129600 ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed -


Gene co-expression network
sample Sobic005G178950 Sobic005G178950 Sobic006G091000 Sobic006G091000 Sobic005G178950--Sobic006G091000 Sobic001G042200 Sobic001G042200 Sobic005G178950--Sobic001G042200 Sobic009G040800 Sobic009G040800 Sobic005G178950--Sobic009G040800 Sobic007G187600 Sobic007G187600 Sobic005G178950--Sobic007G187600 Sobic002G299100 Sobic002G299100 Sobic005G178950--Sobic002G299100 Sobic007G056500 Sobic007G056500 Sobic005G178950--Sobic007G056500 Sobic010G077500 Sobic010G077500 Sobic005G178950--Sobic010G077500 Sobic010G074900 Sobic010G074900 Sobic005G178950--Sobic010G074900 Sobic009G151200 Sobic009G151200 Sobic005G178950--Sobic009G151200 Sobic006G091000--Sobic009G040800 Sobic006G091000--Sobic005G178950 Sobic004G353400 Sobic004G353400 Sobic006G091000--Sobic004G353400 Sobic005G040900 Sobic005G040900 Sobic006G091000--Sobic005G040900 Sobic004G347100 Sobic004G347100 Sobic006G091000--Sobic004G347100 Sobic006G091000--Sobic010G074900 Sobic007G139400 Sobic007G139400 Sobic006G091000--Sobic007G139400 Sobic010G172400 Sobic010G172400 Sobic006G091000--Sobic010G172400 Sobic005G114400 Sobic005G114400 Sobic006G091000--Sobic005G114400 Sobic001G042200--Sobic010G077500 Sobic004G345400 Sobic004G345400 Sobic001G042200--Sobic004G345400 Sobic001G042200--Sobic007G187600 Sobic008G058800 Sobic008G058800 Sobic001G042200--Sobic008G058800 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic009G040800--Sobic006G091000 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic009G040800--Sobic001G042200 Sobic009G040800--Sobic004G353400 Sobic007G187600--Sobic001G042200 Sobic010G266500 Sobic010G266500 Sobic007G187600--Sobic010G266500 Sobic001G168900 Sobic001G168900 Sobic007G187600--Sobic001G168900 Sobic007G187600--Sobic010G077500 Sobic001G023800 Sobic001G023800 Sobic007G187600--Sobic001G023800 Sobic008G173100 Sobic008G173100 Sobic007G187600--Sobic008G173100 Sobic001G346900 Sobic001G346900 Sobic007G187600--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic007G187600--Sobic001G004100 Sobic003G416700 Sobic003G416700 Sobic007G187600--Sobic003G416700 Sobic009G137100 Sobic009G137100 Sobic002G299100--Sobic009G137100 Sobic002G197100 Sobic002G197100 Sobic002G299100--Sobic002G197100 Sobic002G370900 Sobic002G370900 Sobic002G299100--Sobic002G370900 Sobic002G299100--Sobic004G246100 Sobic001G176200 Sobic001G176200 Sobic002G299100--Sobic001G176200 Sobic002G299100--Sobic009G040800 Sobic006G082900 Sobic006G082900 Sobic002G299100--Sobic006G082900 Sobic005G154500 Sobic005G154500 Sobic002G299100--Sobic005G154500 Sobic009G199500 Sobic009G199500 Sobic002G299100--Sobic009G199500 Sobic006G186400 Sobic006G186400 Sobic007G056500--Sobic006G186400 Sobic002G034600 Sobic002G034600 Sobic007G056500--Sobic002G034600 Sobic007G056500--Sobic001G042200 Sobic007G056500--Sobic010G077500 Sobic010G095700 Sobic010G095700 Sobic007G056500--Sobic010G095700 Sobic004G180900 Sobic004G180900 Sobic007G056500--Sobic004G180900 Sobic001G395100 Sobic001G395100 Sobic007G056500--Sobic001G395100 Sobic001G066300 Sobic001G066300 Sobic007G056500--Sobic001G066300 Sobic006G121300 Sobic006G121300 Sobic007G056500--Sobic006G121300 Sobic010G077500--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic010G077500--Sobic006G049100 Sobic010G077500--Sobic004G345400 Sobic010G077500--Sobic007G187600 Sobic010G077500--Sobic003G212900 Sobic010G077500--Sobic008G058800 Sobic010G077500--Sobic007G056500 Sobic002G063900 Sobic002G063900 Sobic010G077500--Sobic002G063900 Sobic010G077500--Sobic009G129600 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic003G205501 Sobic003G205501 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic001G193100 Sobic001G193100 Sobic010G074900--Sobic001G193100 Sobic004G084500 Sobic004G084500 Sobic010G074900--Sobic004G084500 Sobic010G074900--Sobic006G091000 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic003G398400 Sobic003G398400 Sobic010G074900--Sobic003G398400 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic002G259800 Sobic002G259800 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic004G156500 Sobic004G156500 Sobic009G151200--Sobic004G156500
Octagon: transcription factors


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