Gene annotation
Transcriptome id Sobic.007G139400.1
Synonym Sb07g021490
Functional annotation OsFBL33 - F-box domain and LRR containing protein, expressed
UniProt C5YLA8
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03970 : F-box associated ubiquitination effector family protein
RAP-DB (Rice) LOC_Os07g02910.1 : OsFBL33 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a035175
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G139400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
2 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -
3 Sobic.007G188900 AP2 domain containing protein, expressed -
4 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
5 Sobic.007G088900 expressed protein -
6 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
7 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
8 Sobic.009G129600 ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed -
9 Sobic.003G354100 expressed protein -
10 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
11 Sobic.010G237650 - -
12 Sobic.006G248500 expressed protein -
13 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
14 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
15 Sobic.001G472100 frigida, putative, expressed -
16 Sobic.004G242700 heat shock protein DnaJ, putative, expressed -
17 Sobic.010G074900 G protein coupled receptor, putative, expressed -
18 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
19 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
20 Sobic.001G346700 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G139400 Sobic007G139400 Sobic004G347100 Sobic004G347100 Sobic007G139400--Sobic004G347100 Sobic002G033600 Sobic002G033600 Sobic007G139400--Sobic002G033600 Sobic007G188900 Sobic007G188900 Sobic007G139400--Sobic007G188900 Sobic009G040800 Sobic009G040800 Sobic007G139400--Sobic009G040800 Sobic007G088900 Sobic007G088900 Sobic007G139400--Sobic007G088900 Sobic005G040900 Sobic005G040900 Sobic007G139400--Sobic005G040900 Sobic002G334600 Sobic002G334600 Sobic007G139400--Sobic002G334600 Sobic009G129600 Sobic009G129600 Sobic007G139400--Sobic009G129600 Sobic003G354100 Sobic003G354100 Sobic007G139400--Sobic003G354100 Sobic004G347100--Sobic007G139400 Sobic006G248500 Sobic006G248500 Sobic004G347100--Sobic006G248500 Sobic006G091000 Sobic006G091000 Sobic004G347100--Sobic006G091000 Sobic009G044900 Sobic009G044900 Sobic004G347100--Sobic009G044900 Sobic004G347100--Sobic005G040900 Sobic004G347100--Sobic009G129600 Sobic009G151200 Sobic009G151200 Sobic004G347100--Sobic009G151200 Sobic004G347100--Sobic009G040800 Sobic003G336800 Sobic003G336800 Sobic004G347100--Sobic003G336800 Sobic010G237650 Sobic010G237650 Sobic002G033600--Sobic010G237650 Sobic002G033600--Sobic007G139400 Sobic002G268900 Sobic002G268900 Sobic002G033600--Sobic002G268900 Sobic001G049600 Sobic001G049600 Sobic002G033600--Sobic001G049600 Sobic002G061400 Sobic002G061400 Sobic002G033600--Sobic002G061400 Sobic002G033600--Sobic007G188900 Sobic010G199800 Sobic010G199800 Sobic002G033600--Sobic010G199800 Sobic009G102000 Sobic009G102000 Sobic002G033600--Sobic009G102000 Sobic002G033600--Sobic002G334600 Sobic007G188900--Sobic002G061400 Sobic008G129700 Sobic008G129700 Sobic007G188900--Sobic008G129700 Sobic007G188900--Sobic007G139400 Sobic007G188900--Sobic007G088900 Sobic002G177400 Sobic002G177400 Sobic007G188900--Sobic002G177400 Sobic007G188900--Sobic002G334600 Sobic007G188900--Sobic003G354100 Sobic007G188900--Sobic009G129600 Sobic003G433500 Sobic003G433500 Sobic007G188900--Sobic003G433500 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic009G040800--Sobic006G091000 Sobic009G040800--Sobic005G040900 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic006G092800 Sobic006G092800 Sobic007G088900--Sobic006G092800 Sobic004G345700 Sobic004G345700 Sobic007G088900--Sobic004G345700 Sobic004G007300 Sobic004G007300 Sobic007G088900--Sobic004G007300 Sobic001G028400 Sobic001G028400 Sobic007G088900--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic007G088900--Sobic003G437500 Sobic004G013600 Sobic004G013600 Sobic007G088900--Sobic004G013600 Sobic007G191100 Sobic007G191100 Sobic007G088900--Sobic007G191100 Sobic007G088900--Sobic007G139400 Sobic003G248500 Sobic003G248500 Sobic007G088900--Sobic003G248500 Sobic005G040900--Sobic009G040800 Sobic005G040900--Sobic006G091000 Sobic005G040900--Sobic004G347100 Sobic005G040900--Sobic007G139400 Sobic010G074900 Sobic010G074900 Sobic005G040900--Sobic010G074900 Sobic003G205501 Sobic003G205501 Sobic005G040900--Sobic003G205501 Sobic004G345400 Sobic004G345400 Sobic005G040900--Sobic004G345400 Sobic001G472100 Sobic001G472100 Sobic005G040900--Sobic001G472100 Sobic005G040900--Sobic009G129600 Sobic002G223300 Sobic002G223300 Sobic002G334600--Sobic002G223300 Sobic009G030300 Sobic009G030300 Sobic002G334600--Sobic009G030300 Sobic002G334600--Sobic007G139400 Sobic002G334600--Sobic007G188900 Sobic003G132700 Sobic003G132700 Sobic002G334600--Sobic003G132700 Sobic002G089900 Sobic002G089900 Sobic002G334600--Sobic002G089900 Sobic002G334600--Sobic003G354100 Sobic002G334600--Sobic009G044900 Sobic002G157200 Sobic002G157200 Sobic002G334600--Sobic002G157200 Sobic008G058800 Sobic008G058800 Sobic009G129600--Sobic008G058800 Sobic010G077500 Sobic010G077500 Sobic009G129600--Sobic010G077500 Sobic001G346700 Sobic001G346700 Sobic009G129600--Sobic001G346700 Sobic009G129600--Sobic006G248500 Sobic009G129600--Sobic009G040800 Sobic002G063900 Sobic002G063900 Sobic009G129600--Sobic002G063900 Sobic008G100100 Sobic008G100100 Sobic009G129600--Sobic008G100100 Sobic002G357100 Sobic002G357100 Sobic009G129600--Sobic002G357100 Sobic002G148400 Sobic002G148400 Sobic009G129600--Sobic002G148400 Sobic003G354100--Sobic003G433500 Sobic003G354100--Sobic004G013600 Sobic003G354100--Sobic003G132700 Sobic007G117100 Sobic007G117100 Sobic003G354100--Sobic007G117100 Sobic003G354100--Sobic007G188900 Sobic003G354100--Sobic007G139400 Sobic003G354100--Sobic006G092800 Sobic003G354100--Sobic006G248500 Sobic003G354100--Sobic009G129600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.