Gene annotation
Transcriptome id Sobic.007G088900.1
Synonym Sb07g007750
Functional annotation expressed protein
UniProt C5YJI0
Pfam PF10291
Panther DB PTHR37769
NCBI CDD KOG2398; Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57460 : -
RAP-DB (Rice) LOC_Os08g14620.1 : expressed protein
MaizeGDB (Corn) Zm00025a054995
Brachypodium KQJ95771
Barley HORVU2Hr1G002480.2 , HORVU2Hr1G002480.3 , HORVU2Hr1G002480.1 , HORVU2Hr1G002480.6 , HORVU2Hr1G002480.4 , HORVU2Hr1G002480.5 , HORVU2Hr1G002410.1 , HORVU2Hr1G002410.3 , HORVU2Hr1G002410.2
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G088900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
2 Sobic.004G345700 TBC domain containing protein, expressed -
3 Sobic.004G007300 expressed protein -
4 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
5 Sobic.003G437500 syntaxin 6, putative, expressed -
6 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
7 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
8 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
9 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
11 Sobic.007G188900 AP2 domain containing protein, expressed -
12 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
13 Sobic.001G335201 - -
14 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
15 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
16 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
17 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
18 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
19 Sobic.006G267300 expressed protein -
20 Sobic.003G311000 histone-lysine N-methyltransferase SUVR3, putative, expressed -


Gene co-expression network
sample Sobic007G088900 Sobic007G088900 Sobic006G092800 Sobic006G092800 Sobic007G088900--Sobic006G092800 Sobic004G345700 Sobic004G345700 Sobic007G088900--Sobic004G345700 Sobic004G007300 Sobic004G007300 Sobic007G088900--Sobic004G007300 Sobic001G028400 Sobic001G028400 Sobic007G088900--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic007G088900--Sobic003G437500 Sobic004G013600 Sobic004G013600 Sobic007G088900--Sobic004G013600 Sobic007G191100 Sobic007G191100 Sobic007G088900--Sobic007G191100 Sobic007G139400 Sobic007G139400 Sobic007G088900--Sobic007G139400 Sobic003G248500 Sobic003G248500 Sobic007G088900--Sobic003G248500 Sobic006G092800--Sobic004G007300 Sobic006G092800--Sobic004G345700 Sobic006G092800--Sobic007G088900 Sobic001G056200 Sobic001G056200 Sobic006G092800--Sobic001G056200 Sobic006G128800 Sobic006G128800 Sobic006G092800--Sobic006G128800 Sobic002G197100 Sobic002G197100 Sobic006G092800--Sobic002G197100 Sobic006G254600 Sobic006G254600 Sobic006G092800--Sobic006G254600 Sobic001G408700 Sobic001G408700 Sobic006G092800--Sobic001G408700 Sobic006G092800--Sobic003G437500 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic004G345700--Sobic010G245000 Sobic004G007300--Sobic002G197100 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G283000 Sobic004G283000 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic004G007300--Sobic001G056200 Sobic010G033400 Sobic010G033400 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G028400--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic001G028400--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic010G211300 Sobic010G211300 Sobic001G028400--Sobic010G211300 Sobic003G437500--Sobic001G028400 Sobic003G437500--Sobic001G056200 Sobic006G088100 Sobic006G088100 Sobic003G437500--Sobic006G088100 Sobic003G202800 Sobic003G202800 Sobic003G437500--Sobic003G202800 Sobic003G437500--Sobic006G092800 Sobic003G437500--Sobic004G013600 Sobic003G437500--Sobic007G088900 Sobic003G437500--Sobic004G263900 Sobic003G437500--Sobic003G359300 Sobic004G013600--Sobic001G056200 Sobic004G013600--Sobic001G028400 Sobic003G354100 Sobic003G354100 Sobic004G013600--Sobic003G354100 Sobic004G013600--Sobic010G211300 Sobic006G248500 Sobic006G248500 Sobic004G013600--Sobic006G248500 Sobic004G013600--Sobic007G205000 Sobic009G030300 Sobic009G030300 Sobic004G013600--Sobic009G030300 Sobic004G013600--Sobic003G437500 Sobic004G013600--Sobic007G118200 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic004G347100 Sobic004G347100 Sobic007G139400--Sobic004G347100 Sobic002G033600 Sobic002G033600 Sobic007G139400--Sobic002G033600 Sobic007G188900 Sobic007G188900 Sobic007G139400--Sobic007G188900 Sobic009G040800 Sobic009G040800 Sobic007G139400--Sobic009G040800 Sobic007G139400--Sobic007G088900 Sobic005G040900 Sobic005G040900 Sobic007G139400--Sobic005G040900 Sobic002G334600 Sobic002G334600 Sobic007G139400--Sobic002G334600 Sobic009G129600 Sobic009G129600 Sobic007G139400--Sobic009G129600 Sobic007G139400--Sobic003G354100 Sobic003G248500--Sobic003G359300 Sobic003G248500--Sobic004G283000 Sobic010G174800 Sobic010G174800 Sobic003G248500--Sobic010G174800 Sobic001G390500 Sobic001G390500 Sobic003G248500--Sobic001G390500 Sobic003G248500--Sobic002G197100 Sobic003G185200 Sobic003G185200 Sobic003G248500--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G248500--Sobic002G365100 Sobic003G051200 Sobic003G051200 Sobic003G248500--Sobic003G051200 Sobic003G248500--Sobic006G128800
Octagon: transcription factors


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