Gene annotation
Transcriptome id Sobic.010G211300.1
Synonym Sb10g025800
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5Z747
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF356
NCBI CDD KOG0699; Serine/threonine protein phosphatase
KEGG Orthology K17499; PPM1G, protein phosphatase 1G
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT4G31860 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os06g44210.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a019219 , Zm00025a042023 , Zm00025a051622 , Zm00025a051620
Brachypodium KQK16856 , PNT66026 , KQJ93651 , KQJ93650 , KQJ91439 , KQJ91438
Barley HORVU6Hr1G029160.6 , HORVU6Hr1G029160.4 , HORVU6Hr1G029160.5 , HORVU6Hr1G029160.8 , HORVU6Hr1G029160.9 , HORVU6Hr1G029160.2 , HORVU6Hr1G029160.3 , HORVU6Hr1G029160.1 , HORVU7Hr1G113110.1 , HORVU7Hr1G113110.2 , HORVU7Hr1G113110.3 , HORVU7Hr1G113110.4 , HORVU7Hr1G113110.5 , HORVU7Hr1G113110.6 , HORVU7Hr1G113110.7 , HORVU7Hr1G113110.8 , HORVU7Hr1G113110.9 , HORVU6Hr1G029160.7 , HORVU7Hr1G113110.12 , HORVU7Hr1G113110.13 , HORVU7Hr1G113110.10 , HORVU7Hr1G113110.11 , HORVU7Hr1G113110.16 , HORVU7Hr1G113110.17 , HORVU7Hr1G113110.14 , HORVU7Hr1G113110.15
Wheat TraesCS6D02G137200 , TraesCS6D02G137200 , TraesCS6D02G137200 , TraesCS7A02G504800 , TraesCS7B02G411900 , TraesCS6B02G176200 , TraesCS6B02G176200 , TraesCS6B02G176200 , TraesCS6B02G176200 , TraesCS7D02G492000 , TraesCS6A02G147900 , TraesCS6A02G147900 , TraesCS6A02G147900 , TraesCS6A02G147900 , TraesCS6A02G147900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
2 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
3 Sobic.006G267300 expressed protein -
4 Sobic.001G056200 expressed protein -
5 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
6 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
7 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
8 Sobic.003G437500 syntaxin 6, putative, expressed -
9 Sobic.005G000800 FGFR1 oncogene partner, putative, expressed K16546: FGFR1 oncogene partner
10 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
11 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
12 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
13 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
14 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
15 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
16 Sobic.007G088900 expressed protein -
17 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
18 Sobic.004G007300 expressed protein -
19 Sobic.007G063200 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
20 Sobic.003G354100 expressed protein -


Gene co-expression network
sample Sobic010G211300 Sobic010G211300 Sobic001G028400 Sobic001G028400 Sobic010G211300--Sobic001G028400 Sobic004G013600 Sobic004G013600 Sobic010G211300--Sobic004G013600 Sobic006G267300 Sobic006G267300 Sobic010G211300--Sobic006G267300 Sobic001G056200 Sobic001G056200 Sobic010G211300--Sobic001G056200 Sobic001G083600 Sobic001G083600 Sobic010G211300--Sobic001G083600 Sobic010G033400 Sobic010G033400 Sobic010G211300--Sobic010G033400 Sobic002G084300 Sobic002G084300 Sobic010G211300--Sobic002G084300 Sobic003G437500 Sobic003G437500 Sobic010G211300--Sobic003G437500 Sobic005G000800 Sobic005G000800 Sobic010G211300--Sobic005G000800 Sobic001G028400--Sobic010G033400 Sobic007G063200 Sobic007G063200 Sobic001G028400--Sobic007G063200 Sobic001G028400--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic001G028400--Sobic004G263900 Sobic003G359300 Sobic003G359300 Sobic001G028400--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic001G028400--Sobic007G205000 Sobic001G028400--Sobic003G437500 Sobic007G118200 Sobic007G118200 Sobic001G028400--Sobic007G118200 Sobic001G028400--Sobic010G211300 Sobic004G013600--Sobic001G056200 Sobic004G013600--Sobic001G028400 Sobic003G354100 Sobic003G354100 Sobic004G013600--Sobic003G354100 Sobic004G013600--Sobic010G211300 Sobic006G248500 Sobic006G248500 Sobic004G013600--Sobic006G248500 Sobic004G013600--Sobic007G205000 Sobic009G030300 Sobic009G030300 Sobic004G013600--Sobic009G030300 Sobic004G013600--Sobic003G437500 Sobic004G013600--Sobic007G118200 Sobic007G111100 Sobic007G111100 Sobic006G267300--Sobic007G111100 Sobic009G257800 Sobic009G257800 Sobic006G267300--Sobic009G257800 Sobic003G205501 Sobic003G205501 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic006G267300--Sobic007G118200 Sobic010G202600 Sobic010G202600 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic008G127400 Sobic008G127400 Sobic006G267300--Sobic008G127400 Sobic001G056200--Sobic002G084300 Sobic001G056200--Sobic004G263900 Sobic001G056200--Sobic001G408700 Sobic001G056200--Sobic004G013600 Sobic001G056200--Sobic001G028400 Sobic001G056200--Sobic003G437500 Sobic006G088100 Sobic006G088100 Sobic001G056200--Sobic006G088100 Sobic004G007300 Sobic004G007300 Sobic001G056200--Sobic004G007300 Sobic008G174300 Sobic008G174300 Sobic001G056200--Sobic008G174300 Sobic001G390500 Sobic001G390500 Sobic001G083600--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G083600--Sobic010G071200 Sobic001G083600--Sobic004G263900 Sobic001G512900 Sobic001G512900 Sobic001G083600--Sobic001G512900 Sobic010G055500 Sobic010G055500 Sobic001G083600--Sobic010G055500 Sobic001G083600--Sobic008G174300 Sobic001G083600--Sobic002G084300 Sobic001G083600--Sobic001G056200 Sobic001G083600--Sobic010G211300 Sobic010G033400--Sobic007G118200 Sobic010G033400--Sobic008G174300 Sobic009G198100 Sobic009G198100 Sobic010G033400--Sobic009G198100 Sobic004G350100 Sobic004G350100 Sobic010G033400--Sobic004G350100 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic010G033400--Sobic003G359300 Sobic003G081000 Sobic003G081000 Sobic010G033400--Sobic003G081000 Sobic001G131800 Sobic001G131800 Sobic010G033400--Sobic001G131800 Sobic002G084300--Sobic001G056200 Sobic002G084300--Sobic004G263900 Sobic002G084300--Sobic008G174300 Sobic002G378200 Sobic002G378200 Sobic002G084300--Sobic002G378200 Sobic002G084300--Sobic001G028400 Sobic002G084300--Sobic001G408700 Sobic002G084300--Sobic001G390500 Sobic002G084300--Sobic003G081000 Sobic002G084300--Sobic009G198100 Sobic003G437500--Sobic001G028400 Sobic003G437500--Sobic001G056200 Sobic003G437500--Sobic006G088100 Sobic003G202800 Sobic003G202800 Sobic003G437500--Sobic003G202800 Sobic006G092800 Sobic006G092800 Sobic003G437500--Sobic006G092800 Sobic003G437500--Sobic004G013600 Sobic007G088900 Sobic007G088900 Sobic003G437500--Sobic007G088900 Sobic003G437500--Sobic004G263900 Sobic003G437500--Sobic003G359300 Sobic005G000800--Sobic010G211300 Sobic005G000800--Sobic004G013600 Sobic006G110300 Sobic006G110300 Sobic005G000800--Sobic006G110300 Sobic004G305600 Sobic004G305600 Sobic005G000800--Sobic004G305600 Sobic008G001100 Sobic008G001100 Sobic005G000800--Sobic008G001100 Sobic005G000800--Sobic004G350100 Sobic002G272600 Sobic002G272600 Sobic005G000800--Sobic002G272600 Sobic005G000800--Sobic001G028400 Sobic005G000800--Sobic010G033400
Octagon: transcription factors


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