Gene annotation
Transcriptome id Sobic.003G311000.1
Synonym Sb03g035910, SUVR3, SDG20
Functional annotation histone-lysine N-methyltransferase SUVR3, putative, expressed
UniProt C5XLJ3
Pfam PF05033 PF00856
Panther DB PTHR22884 PTHR22884:SF332
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology -
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G03750 : SET domain protein 20
RAP-DB (Rice) LOC_Os01g56540.1 : histone-lysine N-methyltransferase SUVR3, putative, expressed
MaizeGDB (Corn) Zm00025a014628
Brachypodium KQK09977
Barley HORVU3Hr1G075380.2 , HORVU3Hr1G075380.3 , HORVU3Hr1G075380.1
Wheat TraesCS3B02G342100
Populus -


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cDNA sequences
Sobic.003G311000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
2 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
3 Sobic.007G088900 expressed protein -
4 Sobic.001G335201 - -
5 Sobic.003G189900 expressed protein -
6 Sobic.004G057800 URED, putative, expressed K03190: ureD, urease accessory protein
7 Sobic.001G472100 frigida, putative, expressed -
8 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
9 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
10 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
11 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
12 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
13 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
14 Sobic.007G038800 expressed protein -
15 Sobic.009G001100 expressed protein -
16 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
17 Sobic.001G294100 ICE-like protease p20 domain containing protein, expressed -
18 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
20 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126


Gene co-expression network
sample Sobic003G311000 Sobic003G311000 Sobic001G390500 Sobic001G390500 Sobic003G311000--Sobic001G390500 Sobic001G309100 Sobic001G309100 Sobic003G311000--Sobic001G309100 Sobic007G088900 Sobic007G088900 Sobic003G311000--Sobic007G088900 Sobic001G335201 Sobic001G335201 Sobic003G311000--Sobic001G335201 Sobic003G189900 Sobic003G189900 Sobic003G311000--Sobic003G189900 Sobic004G057800 Sobic004G057800 Sobic003G311000--Sobic004G057800 Sobic001G472100 Sobic001G472100 Sobic003G311000--Sobic001G472100 Sobic003G185200 Sobic003G185200 Sobic003G311000--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G311000--Sobic002G365100 Sobic001G083600 Sobic001G083600 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic010G055500 Sobic010G055500 Sobic001G390500--Sobic010G055500 Sobic007G111100 Sobic007G111100 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic010G071200 Sobic010G071200 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic001G038100 Sobic001G038100 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic001G309100--Sobic003G189900 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100 Sobic006G092800 Sobic006G092800 Sobic007G088900--Sobic006G092800 Sobic004G345700 Sobic004G345700 Sobic007G088900--Sobic004G345700 Sobic004G007300 Sobic004G007300 Sobic007G088900--Sobic004G007300 Sobic001G028400 Sobic001G028400 Sobic007G088900--Sobic001G028400 Sobic007G088900--Sobic003G437500 Sobic004G013600 Sobic004G013600 Sobic007G088900--Sobic004G013600 Sobic007G191100 Sobic007G191100 Sobic007G088900--Sobic007G191100 Sobic007G139400 Sobic007G139400 Sobic007G088900--Sobic007G139400 Sobic007G088900--Sobic003G248500 Sobic001G335201--Sobic007G088900 Sobic001G335201--Sobic003G311000 Sobic001G335201--Sobic007G139400 Sobic006G216000 Sobic006G216000 Sobic001G335201--Sobic006G216000 Sobic001G335201--Sobic001G309100 Sobic001G335201--Sobic001G472100 Sobic001G537800 Sobic001G537800 Sobic001G335201--Sobic001G537800 Sobic010G217200 Sobic010G217200 Sobic001G335201--Sobic010G217200 Sobic009G056300 Sobic009G056300 Sobic001G335201--Sobic009G056300 Sobic003G189900--Sobic001G390500 Sobic003G189900--Sobic001G309100 Sobic008G108500 Sobic008G108500 Sobic003G189900--Sobic008G108500 Sobic007G038800 Sobic007G038800 Sobic003G189900--Sobic007G038800 Sobic002G176400 Sobic002G176400 Sobic003G189900--Sobic002G176400 Sobic003G189900--Sobic003G311000 Sobic003G189900--Sobic001G083600 Sobic006G002500 Sobic006G002500 Sobic003G189900--Sobic006G002500 Sobic003G189900--Sobic010G071200 Sobic004G057800--Sobic001G390500 Sobic009G033900 Sobic009G033900 Sobic004G057800--Sobic009G033900 Sobic001G136900 Sobic001G136900 Sobic004G057800--Sobic001G136900 Sobic004G057800--Sobic001G309100 Sobic004G057800--Sobic001G038100 Sobic004G057800--Sobic003G311000 Sobic007G205000 Sobic007G205000 Sobic004G057800--Sobic007G205000 Sobic001G370300 Sobic001G370300 Sobic004G057800--Sobic001G370300 Sobic006G183000 Sobic006G183000 Sobic004G057800--Sobic006G183000 Sobic005G040900 Sobic005G040900 Sobic001G472100--Sobic005G040900 Sobic009G059400 Sobic009G059400 Sobic001G472100--Sobic009G059400 Sobic005G198200 Sobic005G198200 Sobic001G472100--Sobic005G198200 Sobic009G125000 Sobic009G125000 Sobic001G472100--Sobic009G125000 Sobic008G058800 Sobic008G058800 Sobic001G472100--Sobic008G058800 Sobic004G345400 Sobic004G345400 Sobic001G472100--Sobic004G345400 Sobic009G129600 Sobic009G129600 Sobic001G472100--Sobic009G129600 Sobic001G472100--Sobic007G139400 Sobic003G354100 Sobic003G354100 Sobic001G472100--Sobic003G354100 Sobic003G185200--Sobic002G365100 Sobic003G185200--Sobic010G174800 Sobic003G185200--Sobic003G248500 Sobic010G202600 Sobic010G202600 Sobic003G185200--Sobic010G202600 Sobic003G261300 Sobic003G261300 Sobic003G185200--Sobic003G261300 Sobic010G000700 Sobic010G000700 Sobic003G185200--Sobic010G000700 Sobic006G128800 Sobic006G128800 Sobic003G185200--Sobic006G128800 Sobic003G185200--Sobic004G263900 Sobic003G336800 Sobic003G336800 Sobic003G185200--Sobic003G336800 Sobic002G365100--Sobic003G185200 Sobic002G365100--Sobic003G261300 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic002G365100--Sobic010G055500 Sobic002G365100--Sobic010G174800 Sobic002G365100--Sobic001G028400 Sobic002G365100--Sobic006G128800
Octagon: transcription factors


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