Gene annotation
Transcriptome id Sobic.003G189900.1
Synonym Sb03g025420
Functional annotation expressed protein
UniProt C5XNM4
Pfam -
Panther DB PTHR36784 PTHR36784:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26240 : -
RAP-DB (Rice) LOC_Os01g37850.1 : expressed protein
MaizeGDB (Corn) Zm00025a038353
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G189900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
2 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
3 Sobic.008G108500 histone deacetylase 6, putative, expressed -
4 Sobic.007G038800 expressed protein -
5 Sobic.002G176400 ubiquitin domain-containing protein 2, putative, expressed -
6 Sobic.003G311000 histone-lysine N-methyltransferase SUVR3, putative, expressed -
7 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
8 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
9 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
10 Sobic.003G417900 cullin-1, putative, expressed -
11 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
12 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
13 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
14 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
15 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
16 Sobic.008G073000 expressed protein -
17 Sobic.003G354100 expressed protein -
18 Sobic.008G192000 yippee zinc-binding protein, putative, expressed -
19 Sobic.010G211300 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
20 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -


Gene co-expression network
sample Sobic003G189900 Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic003G189900--Sobic001G390500 Sobic001G309100 Sobic001G309100 Sobic003G189900--Sobic001G309100 Sobic008G108500 Sobic008G108500 Sobic003G189900--Sobic008G108500 Sobic007G038800 Sobic007G038800 Sobic003G189900--Sobic007G038800 Sobic002G176400 Sobic002G176400 Sobic003G189900--Sobic002G176400 Sobic003G311000 Sobic003G311000 Sobic003G189900--Sobic003G311000 Sobic001G083600 Sobic001G083600 Sobic003G189900--Sobic001G083600 Sobic006G002500 Sobic006G002500 Sobic003G189900--Sobic006G002500 Sobic010G071200 Sobic010G071200 Sobic003G189900--Sobic010G071200 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic010G055500 Sobic010G055500 Sobic001G390500--Sobic010G055500 Sobic007G111100 Sobic007G111100 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic001G038100 Sobic001G038100 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic001G309100--Sobic003G189900 Sobic001G309100--Sobic001G390500 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic007G117100 Sobic007G117100 Sobic001G309100--Sobic007G117100 Sobic007G192100 Sobic007G192100 Sobic008G108500--Sobic007G192100 Sobic008G108500--Sobic002G176400 Sobic008G108500--Sobic003G189900 Sobic002G401700 Sobic002G401700 Sobic008G108500--Sobic002G401700 Sobic001G036700 Sobic001G036700 Sobic008G108500--Sobic001G036700 Sobic008G108500--Sobic007G038800 Sobic004G122000 Sobic004G122000 Sobic008G108500--Sobic004G122000 Sobic007G117800 Sobic007G117800 Sobic008G108500--Sobic007G117800 Sobic009G086200 Sobic009G086200 Sobic008G108500--Sobic009G086200 Sobic009G036900 Sobic009G036900 Sobic007G038800--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic007G038800--Sobic002G068300 Sobic007G038800--Sobic003G189900 Sobic007G038800--Sobic007G192100 Sobic009G034400 Sobic009G034400 Sobic007G038800--Sobic009G034400 Sobic006G099800 Sobic006G099800 Sobic007G038800--Sobic006G099800 Sobic009G252800 Sobic009G252800 Sobic007G038800--Sobic009G252800 Sobic007G038800--Sobic008G108500 Sobic001G126200 Sobic001G126200 Sobic007G038800--Sobic001G126200 Sobic002G176400--Sobic001G036700 Sobic002G176400--Sobic008G108500 Sobic002G176400--Sobic004G122000 Sobic002G176400--Sobic007G192100 Sobic002G176400--Sobic003G189900 Sobic002G176400--Sobic009G086200 Sobic002G176400--Sobic001G126200 Sobic002G176400--Sobic009G034400 Sobic002G176400--Sobic007G038800 Sobic003G311000--Sobic001G390500 Sobic003G311000--Sobic001G309100 Sobic007G088900 Sobic007G088900 Sobic003G311000--Sobic007G088900 Sobic001G335201 Sobic001G335201 Sobic003G311000--Sobic001G335201 Sobic003G311000--Sobic003G189900 Sobic004G057800 Sobic004G057800 Sobic003G311000--Sobic004G057800 Sobic001G472100 Sobic001G472100 Sobic003G311000--Sobic001G472100 Sobic003G185200 Sobic003G185200 Sobic003G311000--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G311000--Sobic002G365100 Sobic001G083600--Sobic001G390500 Sobic001G083600--Sobic010G071200 Sobic001G083600--Sobic004G263900 Sobic001G512900 Sobic001G512900 Sobic001G083600--Sobic001G512900 Sobic001G083600--Sobic010G055500 Sobic008G174300 Sobic008G174300 Sobic001G083600--Sobic008G174300 Sobic001G083600--Sobic002G084300 Sobic001G056200 Sobic001G056200 Sobic001G083600--Sobic001G056200 Sobic010G211300 Sobic010G211300 Sobic001G083600--Sobic010G211300 Sobic009G246950 Sobic009G246950 Sobic006G002500--Sobic009G246950 Sobic002G256300 Sobic002G256300 Sobic006G002500--Sobic002G256300 Sobic006G002500--Sobic001G390500 Sobic007G203700 Sobic007G203700 Sobic006G002500--Sobic007G203700 Sobic001G532100 Sobic001G532100 Sobic006G002500--Sobic001G532100 Sobic010G193800 Sobic010G193800 Sobic006G002500--Sobic010G193800 Sobic006G002500--Sobic001G512900 Sobic003G038600 Sobic003G038600 Sobic006G002500--Sobic003G038600 Sobic006G002500--Sobic003G189900 Sobic010G071200--Sobic010G055500 Sobic001G149700 Sobic001G149700 Sobic010G071200--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic008G142700 Sobic008G142700 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic010G071200--Sobic001G083600
Octagon: transcription factors


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