Gene annotation
Transcriptome id Sobic.001G512900.1
Synonym Sb01g047860
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt Q1HNF4 , Q1KSA9
Pfam PF00076 PF00226
Panther DB PTHR24078 PTHR24078:SF264
NCBI CDD KOG0691; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09537; DnaJ homolog subfamily C member 17
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G23590 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os03g04400.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a000501
Brachypodium -
Barley -
Wheat TraesCS1A02G223900 , TraesCS1D02G225500 , TraesCS1B02G237200 , TraesCS1B02G237200 , TraesCS4A02G426000
Populus -


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cDNA sequences
Sobic.001G512900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
2 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
3 Sobic.008G142700 expressed protein -
4 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
5 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
6 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
7 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
8 Sobic.003G127400 BSD domain-containing protein, putative, expressed -
9 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
10 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
11 Sobic.001G131800 expressed protein K15186: ELL-associated factor
12 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.002G346900 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
14 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
15 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
17 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
18 Sobic.008G128600 miro, putative, expressed K07953: GTP-binding protein SAR1
19 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
20 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A


Gene co-expression network
sample Sobic001G512900 Sobic001G512900 Sobic010G071200 Sobic010G071200 Sobic001G512900--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G512900--Sobic010G055500 Sobic008G142700 Sobic008G142700 Sobic001G512900--Sobic008G142700 Sobic008G174300 Sobic008G174300 Sobic001G512900--Sobic008G174300 Sobic001G083600 Sobic001G083600 Sobic001G512900--Sobic001G083600 Sobic001G390500 Sobic001G390500 Sobic001G512900--Sobic001G390500 Sobic001G149700 Sobic001G149700 Sobic001G512900--Sobic001G149700 Sobic003G127400 Sobic003G127400 Sobic001G512900--Sobic003G127400 Sobic009G246950 Sobic009G246950 Sobic001G512900--Sobic009G246950 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G071200--Sobic004G231400 Sobic004G263900 Sobic004G263900 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic010G071200--Sobic001G083600 Sobic010G055500--Sobic010G071200 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic010G055500--Sobic001G512900 Sobic006G109300 Sobic006G109300 Sobic010G055500--Sobic006G109300 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic004G150400 Sobic004G150400 Sobic010G055500--Sobic004G150400 Sobic008G142700--Sobic010G071200 Sobic008G142700--Sobic001G512900 Sobic008G142700--Sobic010G055500 Sobic008G142700--Sobic001G149700 Sobic007G063200 Sobic007G063200 Sobic008G142700--Sobic007G063200 Sobic003G350600 Sobic003G350600 Sobic008G142700--Sobic003G350600 Sobic008G142700--Sobic006G109300 Sobic008G142700--Sobic009G246950 Sobic008G142700--Sobic001G478300 Sobic001G131800 Sobic001G131800 Sobic008G174300--Sobic001G131800 Sobic010G260500 Sobic010G260500 Sobic008G174300--Sobic010G260500 Sobic010G033400 Sobic010G033400 Sobic008G174300--Sobic010G033400 Sobic003G081000 Sobic003G081000 Sobic008G174300--Sobic003G081000 Sobic007G118200 Sobic007G118200 Sobic008G174300--Sobic007G118200 Sobic008G174300--Sobic004G263900 Sobic009G198100 Sobic009G198100 Sobic008G174300--Sobic009G198100 Sobic003G355000 Sobic003G355000 Sobic008G174300--Sobic003G355000 Sobic003G359300 Sobic003G359300 Sobic008G174300--Sobic003G359300 Sobic001G083600--Sobic001G390500 Sobic001G083600--Sobic010G071200 Sobic001G083600--Sobic004G263900 Sobic001G083600--Sobic001G512900 Sobic001G083600--Sobic010G055500 Sobic001G083600--Sobic008G174300 Sobic002G084300 Sobic002G084300 Sobic001G083600--Sobic002G084300 Sobic001G056200 Sobic001G056200 Sobic001G083600--Sobic001G056200 Sobic010G211300 Sobic010G211300 Sobic001G083600--Sobic010G211300 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic001G390500--Sobic010G055500 Sobic007G111100 Sobic007G111100 Sobic001G390500--Sobic007G111100 Sobic001G390500--Sobic004G263900 Sobic003G189900 Sobic003G189900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic001G390500--Sobic010G071200 Sobic001G390500--Sobic002G084300 Sobic001G149700--Sobic010G071200 Sobic001G149700--Sobic010G055500 Sobic001G149700--Sobic004G231400 Sobic001G149700--Sobic001G478300 Sobic001G149700--Sobic006G257900 Sobic001G149700--Sobic008G142700 Sobic003G273100 Sobic003G273100 Sobic001G149700--Sobic003G273100 Sobic001G076000 Sobic001G076000 Sobic001G149700--Sobic001G076000 Sobic001G149700--Sobic001G512900 Sobic003G127400--Sobic001G512900 Sobic003G127400--Sobic009G246950 Sobic004G305600 Sobic004G305600 Sobic003G127400--Sobic004G305600 Sobic002G256300 Sobic002G256300 Sobic003G127400--Sobic002G256300 Sobic001G078500 Sobic001G078500 Sobic003G127400--Sobic001G078500 Sobic003G000800 Sobic003G000800 Sobic003G127400--Sobic003G000800 Sobic003G127400--Sobic008G142700 Sobic009G171700 Sobic009G171700 Sobic003G127400--Sobic009G171700 Sobic010G168600 Sobic010G168600 Sobic003G127400--Sobic010G168600 Sobic009G246950--Sobic002G256300 Sobic007G203700 Sobic007G203700 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic010G083700 Sobic010G083700 Sobic009G246950--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic009G246950--Sobic001G054200 Sobic007G186300 Sobic007G186300 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G246950--Sobic008G180900 Sobic001G007200 Sobic001G007200 Sobic009G246950--Sobic001G007200
Octagon: transcription factors


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