Gene annotation
Transcriptome id Sobic.007G038800.1
Synonym Sb07g003300
Functional annotation expressed protein
UniProt A0A1Z5R7Y1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01500 : Erythronate-4-phosphate dehydrogenase family protein
RAP-DB (Rice) LOC_Os08g05550.1 : expressed protein
MaizeGDB (Corn) Zm00025a055224
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
2 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
3 Sobic.003G189900 expressed protein -
4 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
5 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
6 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
7 Sobic.009G252800 expressed protein -
8 Sobic.008G108500 histone deacetylase 6, putative, expressed -
9 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
10 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
11 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
12 Sobic.008G142700 expressed protein -
13 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
14 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G424500 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
16 Sobic.004G057800 URED, putative, expressed K03190: ureD, urease accessory protein
17 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
18 Sobic.001G036700 OsFBX442 - F-box domain containing protein, expressed -
19 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
20 Sobic.001G402600 expressed protein -


Gene co-expression network
sample Sobic007G038800 Sobic007G038800 Sobic009G036900 Sobic009G036900 Sobic007G038800--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic007G038800--Sobic002G068300 Sobic003G189900 Sobic003G189900 Sobic007G038800--Sobic003G189900 Sobic007G192100 Sobic007G192100 Sobic007G038800--Sobic007G192100 Sobic009G034400 Sobic009G034400 Sobic007G038800--Sobic009G034400 Sobic006G099800 Sobic006G099800 Sobic007G038800--Sobic006G099800 Sobic009G252800 Sobic009G252800 Sobic007G038800--Sobic009G252800 Sobic008G108500 Sobic008G108500 Sobic007G038800--Sobic008G108500 Sobic001G126200 Sobic001G126200 Sobic007G038800--Sobic001G126200 Sobic009G036900--Sobic002G068300 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic002G068300--Sobic009G036900 Sobic002G068300--Sobic010G228600 Sobic009G016201 Sobic009G016201 Sobic002G068300--Sobic009G016201 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic003G249800 Sobic003G249800 Sobic002G068300--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic002G068300--Sobic002G282400 Sobic001G389400 Sobic001G389400 Sobic002G068300--Sobic001G389400 Sobic002G205300 Sobic002G205300 Sobic002G068300--Sobic002G205300 Sobic001G390500 Sobic001G390500 Sobic003G189900--Sobic001G390500 Sobic001G309100 Sobic001G309100 Sobic003G189900--Sobic001G309100 Sobic003G189900--Sobic008G108500 Sobic003G189900--Sobic007G038800 Sobic002G176400 Sobic002G176400 Sobic003G189900--Sobic002G176400 Sobic003G311000 Sobic003G311000 Sobic003G189900--Sobic003G311000 Sobic001G083600 Sobic001G083600 Sobic003G189900--Sobic001G083600 Sobic006G002500 Sobic006G002500 Sobic003G189900--Sobic006G002500 Sobic003G189900--Sobic010G071200 Sobic007G192100--Sobic008G108500 Sobic001G036700 Sobic001G036700 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic007G192100--Sobic002G176400 Sobic007G192100--Sobic001G126200 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic007G192100--Sobic007G117800 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic004G122000 Sobic004G122000 Sobic009G034400--Sobic004G122000 Sobic009G034400--Sobic010G071200 Sobic009G034400--Sobic010G228600 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic002G179500 Sobic002G179500 Sobic009G034400--Sobic002G179500 Sobic009G034400--Sobic001G309100 Sobic002G276900 Sobic002G276900 Sobic006G099800--Sobic002G276900 Sobic006G099800--Sobic007G038800 Sobic001G148700 Sobic001G148700 Sobic006G099800--Sobic001G148700 Sobic003G227200 Sobic003G227200 Sobic006G099800--Sobic003G227200 Sobic003G434000 Sobic003G434000 Sobic006G099800--Sobic003G434000 Sobic006G099800--Sobic007G192100 Sobic006G099800--Sobic008G108500 Sobic003G031200 Sobic003G031200 Sobic006G099800--Sobic003G031200 Sobic004G028800 Sobic004G028800 Sobic006G099800--Sobic004G028800 Sobic008G142700 Sobic008G142700 Sobic009G252800--Sobic008G142700 Sobic009G252800--Sobic007G038800 Sobic009G252800--Sobic006G002500 Sobic009G252800--Sobic010G071200 Sobic009G171700 Sobic009G171700 Sobic009G252800--Sobic009G171700 Sobic003G361500 Sobic003G361500 Sobic009G252800--Sobic003G361500 Sobic001G136900 Sobic001G136900 Sobic009G252800--Sobic001G136900 Sobic004G316900 Sobic004G316900 Sobic009G252800--Sobic004G316900 Sobic010G055500 Sobic010G055500 Sobic009G252800--Sobic010G055500 Sobic008G108500--Sobic007G192100 Sobic008G108500--Sobic002G176400 Sobic008G108500--Sobic003G189900 Sobic002G401700 Sobic002G401700 Sobic008G108500--Sobic002G401700 Sobic008G108500--Sobic001G036700 Sobic008G108500--Sobic007G038800 Sobic008G108500--Sobic004G122000 Sobic008G108500--Sobic007G117800 Sobic009G086200 Sobic009G086200 Sobic008G108500--Sobic009G086200 Sobic006G222400 Sobic006G222400 Sobic001G126200--Sobic006G222400 Sobic004G224800 Sobic004G224800 Sobic001G126200--Sobic004G224800 Sobic006G094600 Sobic006G094600 Sobic001G126200--Sobic006G094600 Sobic003G131300 Sobic003G131300 Sobic001G126200--Sobic003G131300 Sobic001G285300 Sobic001G285300 Sobic001G126200--Sobic001G285300 Sobic010G238700 Sobic010G238700 Sobic001G126200--Sobic010G238700 Sobic001G367000 Sobic001G367000 Sobic001G126200--Sobic001G367000 Sobic002G044000 Sobic002G044000 Sobic001G126200--Sobic002G044000 Sobic001G126200--Sobic007G192100
Octagon: transcription factors


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