Gene annotation
Transcriptome id Sobic.001G402600.2
Synonym Sb01g038090
Functional annotation expressed protein
UniProt A0A1Z5SA85
Pfam -
Panther DB PTHR36792 PTHR36792:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05360 : -
RAP-DB (Rice) LOC_Os03g18700.1 : expressed protein
MaizeGDB (Corn) Zm00025a002048
Brachypodium -
Barley HORVU4Hr1G055050.2 , HORVU4Hr1G055050.1
Wheat TraesCS4D02G190400 , TraesCS4A02G115100 , TraesCS4B02G189100
Populus -


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cDNA sequences
Sobic.001G402600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G242100 expressed protein -
2 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
3 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
4 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
5 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
6 Sobic.006G143500 expressed protein -
7 Sobic.001G285300 expressed protein -
8 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
9 Sobic.007G073600 expressed protein K16585: HAUS augmin-like complex subunit 2
10 Sobic.007G038800 expressed protein -
11 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
12 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
13 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
14 Sobic.002G176400 ubiquitin domain-containing protein 2, putative, expressed -
15 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
16 Sobic.001G392800 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed K03949: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
17 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
18 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
19 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
20 Sobic.001G036700 OsFBX442 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G402600 Sobic001G402600 Sobic004G242100 Sobic004G242100 Sobic001G402600--Sobic004G242100 Sobic007G192100 Sobic007G192100 Sobic001G402600--Sobic007G192100 Sobic001G126200 Sobic001G126200 Sobic001G402600--Sobic001G126200 Sobic007G092100 Sobic007G092100 Sobic001G402600--Sobic007G092100 Sobic003G358300 Sobic003G358300 Sobic001G402600--Sobic003G358300 Sobic006G143500 Sobic006G143500 Sobic001G402600--Sobic006G143500 Sobic001G285300 Sobic001G285300 Sobic001G402600--Sobic001G285300 Sobic003G224300 Sobic003G224300 Sobic001G402600--Sobic003G224300 Sobic007G073600 Sobic007G073600 Sobic001G402600--Sobic007G073600 Sobic004G242100--Sobic001G402600 Sobic003G031200 Sobic003G031200 Sobic004G242100--Sobic003G031200 Sobic003G435000 Sobic003G435000 Sobic004G242100--Sobic003G435000 Sobic001G544100 Sobic001G544100 Sobic004G242100--Sobic001G544100 Sobic006G236500 Sobic006G236500 Sobic004G242100--Sobic006G236500 Sobic009G016500 Sobic009G016500 Sobic004G242100--Sobic009G016500 Sobic004G012800 Sobic004G012800 Sobic004G242100--Sobic004G012800 Sobic007G037000 Sobic007G037000 Sobic004G242100--Sobic007G037000 Sobic001G434400 Sobic001G434400 Sobic004G242100--Sobic001G434400 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic001G036700 Sobic001G036700 Sobic007G192100--Sobic001G036700 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic007G192100--Sobic007G117800 Sobic006G222400 Sobic006G222400 Sobic001G126200--Sobic006G222400 Sobic004G224800 Sobic004G224800 Sobic001G126200--Sobic004G224800 Sobic006G094600 Sobic006G094600 Sobic001G126200--Sobic006G094600 Sobic003G131300 Sobic003G131300 Sobic001G126200--Sobic003G131300 Sobic001G126200--Sobic001G285300 Sobic010G238700 Sobic010G238700 Sobic001G126200--Sobic010G238700 Sobic001G367000 Sobic001G367000 Sobic001G126200--Sobic001G367000 Sobic002G044000 Sobic002G044000 Sobic001G126200--Sobic002G044000 Sobic001G126200--Sobic007G192100 Sobic004G066800 Sobic004G066800 Sobic007G092100--Sobic004G066800 Sobic001G057300 Sobic001G057300 Sobic007G092100--Sobic001G057300 Sobic001G505500 Sobic001G505500 Sobic007G092100--Sobic001G505500 Sobic001G035400 Sobic001G035400 Sobic007G092100--Sobic001G035400 Sobic001G342200 Sobic001G342200 Sobic007G092100--Sobic001G342200 Sobic003G330500 Sobic003G330500 Sobic007G092100--Sobic003G330500 Sobic001G096100 Sobic001G096100 Sobic007G092100--Sobic001G096100 Sobic004G138800 Sobic004G138800 Sobic007G092100--Sobic004G138800 Sobic009G191200 Sobic009G191200 Sobic007G092100--Sobic009G191200 Sobic001G066700 Sobic001G066700 Sobic003G358300--Sobic001G066700 Sobic006G231700 Sobic006G231700 Sobic003G358300--Sobic006G231700 Sobic005G111100 Sobic005G111100 Sobic003G358300--Sobic005G111100 Sobic003G358300--Sobic002G044000 Sobic004G032000 Sobic004G032000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic003G358300--Sobic009G191200 Sobic006G143500--Sobic004G032000 Sobic006G143500--Sobic001G285300 Sobic006G143500--Sobic002G044000 Sobic001G517600 Sobic001G517600 Sobic006G143500--Sobic001G517600 Sobic001G402300 Sobic001G402300 Sobic006G143500--Sobic001G402300 Sobic001G532100 Sobic001G532100 Sobic006G143500--Sobic001G532100 Sobic006G143500--Sobic003G358300 Sobic006G143500--Sobic001G126200 Sobic006G143500--Sobic001G402600 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic001G285300--Sobic006G143500 Sobic001G285300--Sobic002G044000 Sobic001G285300--Sobic001G036700 Sobic001G285300--Sobic001G126200 Sobic003G420700 Sobic003G420700 Sobic001G285300--Sobic003G420700 Sobic001G285300--Sobic001G402300 Sobic001G285300--Sobic006G094600 Sobic003G224300--Sobic001G035400 Sobic003G148900 Sobic003G148900 Sobic003G224300--Sobic003G148900 Sobic002G087000 Sobic002G087000 Sobic003G224300--Sobic002G087000 Sobic003G224300--Sobic001G392800 Sobic010G059700 Sobic010G059700 Sobic003G224300--Sobic010G059700 Sobic009G164700 Sobic009G164700 Sobic003G224300--Sobic009G164700 Sobic003G224300--Sobic001G402600 Sobic007G024200 Sobic007G024200 Sobic003G224300--Sobic007G024200 Sobic010G277000 Sobic010G277000 Sobic003G224300--Sobic010G277000 Sobic004G123000 Sobic004G123000 Sobic007G073600--Sobic004G123000 Sobic007G073600--Sobic001G402600 Sobic007G073600--Sobic003G358300 Sobic007G073600--Sobic007G192100 Sobic007G073600--Sobic009G164700 Sobic009G054000 Sobic009G054000 Sobic007G073600--Sobic009G054000 Sobic001G013200 Sobic001G013200 Sobic007G073600--Sobic001G013200 Sobic007G073600--Sobic001G035400 Sobic006G203900 Sobic006G203900 Sobic007G073600--Sobic006G203900
Octagon: transcription factors


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