Gene annotation
Transcriptome id Sobic.007G073600.1
Synonym Sb07g005840
Functional annotation expressed protein
UniProt C5YIH7
Pfam PF15003
Panther DB PTHR16039
NCBI CDD -
KEGG Orthology K16585; HAUS augmin-like complex subunit 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32980 : -
RAP-DB (Rice) LOC_Os08g10410.1 : expressed protein
MaizeGDB (Corn) Zm00025a054849
Brachypodium KQJ95534
Barley HORVU7Hr1G106630.1 , HORVU7Hr1G106500.5 , HORVU7Hr1G106500.4 , HORVU7Hr1G106500.6 , HORVU7Hr1G106500.1 , HORVU7Hr1G106500.3 , HORVU7Hr1G106500.2
Wheat TraesCS7B02G364500 , TraesCS7B02G365000 , TraesCS7A02G464500 , TraesCS7D02G452100 , TraesCS7D02G451600 , TraesCS7A02G464000
Populus -


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cDNA sequences
Sobic.007G073600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G123000 expressed protein -
2 Sobic.001G402600 expressed protein -
3 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
4 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
5 Sobic.009G164700 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
6 Sobic.009G054000 expressed protein -
7 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
8 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
9 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
10 Sobic.003G074900 expressed protein -
11 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
12 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
13 Sobic.004G048700 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
14 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
15 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
16 Sobic.001G285300 expressed protein -
17 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
18 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
19 Sobic.002G176400 ubiquitin domain-containing protein 2, putative, expressed -
20 Sobic.003G044700 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic007G073600 Sobic007G073600 Sobic004G123000 Sobic004G123000 Sobic007G073600--Sobic004G123000 Sobic001G402600 Sobic001G402600 Sobic007G073600--Sobic001G402600 Sobic003G358300 Sobic003G358300 Sobic007G073600--Sobic003G358300 Sobic007G192100 Sobic007G192100 Sobic007G073600--Sobic007G192100 Sobic009G164700 Sobic009G164700 Sobic007G073600--Sobic009G164700 Sobic009G054000 Sobic009G054000 Sobic007G073600--Sobic009G054000 Sobic001G013200 Sobic001G013200 Sobic007G073600--Sobic001G013200 Sobic001G035400 Sobic001G035400 Sobic007G073600--Sobic001G035400 Sobic006G203900 Sobic006G203900 Sobic007G073600--Sobic006G203900 Sobic004G123000--Sobic009G054000 Sobic006G239300 Sobic006G239300 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic003G209000 Sobic003G209000 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G159000 Sobic004G159000 Sobic004G123000--Sobic004G159000 Sobic001G404800 Sobic001G404800 Sobic004G123000--Sobic001G404800 Sobic004G242100 Sobic004G242100 Sobic001G402600--Sobic004G242100 Sobic001G402600--Sobic007G192100 Sobic001G126200 Sobic001G126200 Sobic001G402600--Sobic001G126200 Sobic007G092100 Sobic007G092100 Sobic001G402600--Sobic007G092100 Sobic001G402600--Sobic003G358300 Sobic006G143500 Sobic006G143500 Sobic001G402600--Sobic006G143500 Sobic001G285300 Sobic001G285300 Sobic001G402600--Sobic001G285300 Sobic003G224300 Sobic003G224300 Sobic001G402600--Sobic003G224300 Sobic001G402600--Sobic007G073600 Sobic001G066700 Sobic001G066700 Sobic003G358300--Sobic001G066700 Sobic006G231700 Sobic006G231700 Sobic003G358300--Sobic006G231700 Sobic005G111100 Sobic005G111100 Sobic003G358300--Sobic005G111100 Sobic002G044000 Sobic002G044000 Sobic003G358300--Sobic002G044000 Sobic004G032000 Sobic004G032000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic001G036700 Sobic001G036700 Sobic007G192100--Sobic001G036700 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic007G192100--Sobic007G117800 Sobic009G164700--Sobic001G035400 Sobic009G164700--Sobic007G092100 Sobic001G542900 Sobic001G542900 Sobic009G164700--Sobic001G542900 Sobic001G010700 Sobic001G010700 Sobic009G164700--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic009G164700--Sobic003G330500 Sobic001G196100 Sobic001G196100 Sobic009G164700--Sobic001G196100 Sobic009G164700--Sobic006G203900 Sobic004G066800 Sobic004G066800 Sobic009G164700--Sobic004G066800 Sobic001G096100 Sobic001G096100 Sobic009G164700--Sobic001G096100 Sobic009G054000--Sobic004G123000 Sobic009G054000--Sobic001G404800 Sobic009G054000--Sobic003G209000 Sobic003G129800 Sobic003G129800 Sobic009G054000--Sobic003G129800 Sobic010G028200 Sobic010G028200 Sobic009G054000--Sobic010G028200 Sobic009G179100 Sobic009G179100 Sobic009G054000--Sobic009G179100 Sobic001G334300 Sobic001G334300 Sobic009G054000--Sobic001G334300 Sobic009G101700 Sobic009G101700 Sobic009G054000--Sobic009G101700 Sobic009G054000--Sobic003G155400 Sobic003G167000 Sobic003G167000 Sobic001G013200--Sobic003G167000 Sobic007G048700 Sobic007G048700 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic007G003100 Sobic007G003100 Sobic001G013200--Sobic007G003100 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic001G035400--Sobic007G092100 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G073600 Sobic001G073600 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G116000 Sobic001G116000 Sobic001G035400--Sobic001G116000 Sobic008G136800 Sobic008G136800 Sobic006G203900--Sobic008G136800 Sobic009G211900 Sobic009G211900 Sobic006G203900--Sobic009G211900 Sobic006G203900--Sobic001G035400 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G124300 Sobic006G124300 Sobic006G203900--Sobic006G124300 Sobic003G135600 Sobic003G135600 Sobic006G203900--Sobic003G135600 Sobic009G001900 Sobic009G001900 Sobic006G203900--Sobic009G001900 Sobic007G013900 Sobic007G013900 Sobic006G203900--Sobic007G013900
Octagon: transcription factors


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