Gene annotation
Transcriptome id Sobic.009G164700.1
Synonym RAB8A, ARA-3, ATRABE1C, ARA3, Sb09g022670, ATRAB8A
Functional annotation ras-related protein, putative, expressed
UniProt C5YZA7
Pfam PF00025
Panther DB PTHR24073 PTHR24073:SF541
NCBI CDD KOG0078; GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
KEGG Orthology K07901; RAB8A, Ras-related protein Rab-8A
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT3G46060 : RAB GTPase homolog 8A
RAP-DB (Rice) LOC_Os05g38630.2 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a043906 , Zm00025a037706 , Zm00025a013362
Brachypodium PNT71098 , KQK05877
Barley HORVU1Hr1G072070.5 , HORVU1Hr1G072070.4 , HORVU1Hr1G072070.3 , HORVU1Hr1G072070.2 , HORVU1Hr1G072070.1
Wheat TraesCS1D02G285200 , TraesCS1B02G295600 , TraesCS1A02G286200 , TraesCS1A02G286200 , TraesCS1A02G286200
Populus -


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cDNA sequences
Sobic.009G164700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
2 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
3 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
4 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
5 Sobic.003G330500 peptidase, T1 family, putative, expressed -
6 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
7 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
8 Sobic.004G066800 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
9 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
11 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
13 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
14 Sobic.001G505500 ankyrin repeat domain containing protein, expressed -
15 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
16 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
17 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
18 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
19 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
20 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5


Gene co-expression network
sample Sobic009G164700 Sobic009G164700 Sobic001G035400 Sobic001G035400 Sobic009G164700--Sobic001G035400 Sobic007G092100 Sobic007G092100 Sobic009G164700--Sobic007G092100 Sobic001G542900 Sobic001G542900 Sobic009G164700--Sobic001G542900 Sobic001G010700 Sobic001G010700 Sobic009G164700--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic009G164700--Sobic003G330500 Sobic001G196100 Sobic001G196100 Sobic009G164700--Sobic001G196100 Sobic006G203900 Sobic006G203900 Sobic009G164700--Sobic006G203900 Sobic004G066800 Sobic004G066800 Sobic009G164700--Sobic004G066800 Sobic001G096100 Sobic001G096100 Sobic009G164700--Sobic001G096100 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic001G035400--Sobic007G092100 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G073600 Sobic001G073600 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G116000 Sobic001G116000 Sobic001G035400--Sobic001G116000 Sobic007G092100--Sobic004G066800 Sobic001G057300 Sobic001G057300 Sobic007G092100--Sobic001G057300 Sobic001G505500 Sobic001G505500 Sobic007G092100--Sobic001G505500 Sobic007G092100--Sobic001G035400 Sobic001G342200 Sobic001G342200 Sobic007G092100--Sobic001G342200 Sobic007G092100--Sobic003G330500 Sobic007G092100--Sobic001G096100 Sobic004G138800 Sobic004G138800 Sobic007G092100--Sobic004G138800 Sobic009G191200 Sobic009G191200 Sobic007G092100--Sobic009G191200 Sobic007G217400 Sobic007G217400 Sobic001G542900--Sobic007G217400 Sobic002G423800 Sobic002G423800 Sobic001G542900--Sobic002G423800 Sobic004G335000 Sobic004G335000 Sobic001G542900--Sobic004G335000 Sobic008G110500 Sobic008G110500 Sobic001G542900--Sobic008G110500 Sobic003G043400 Sobic003G043400 Sobic001G542900--Sobic003G043400 Sobic001G444300 Sobic001G444300 Sobic001G542900--Sobic001G444300 Sobic002G141700 Sobic002G141700 Sobic001G542900--Sobic002G141700 Sobic001G542900--Sobic009G164700 Sobic007G176200 Sobic007G176200 Sobic001G542900--Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic001G010700--Sobic003G330500 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic001G010700--Sobic003G043400 Sobic001G010700--Sobic002G423800 Sobic003G330500--Sobic004G224900 Sobic003G330500--Sobic007G176200 Sobic007G076300 Sobic007G076300 Sobic003G330500--Sobic007G076300 Sobic003G330500--Sobic006G252200 Sobic003G330500--Sobic001G458700 Sobic003G330500--Sobic001G010700 Sobic001G502200 Sobic001G502200 Sobic003G330500--Sobic001G502200 Sobic003G330500--Sobic004G138800 Sobic003G330500--Sobic001G096100 Sobic001G196100--Sobic001G116000 Sobic007G044400 Sobic007G044400 Sobic001G196100--Sobic007G044400 Sobic001G281900 Sobic001G281900 Sobic001G196100--Sobic001G281900 Sobic001G196100--Sobic001G035400 Sobic001G418000 Sobic001G418000 Sobic001G196100--Sobic001G418000 Sobic001G196100--Sobic002G087000 Sobic003G319000 Sobic003G319000 Sobic001G196100--Sobic003G319000 Sobic003G322300 Sobic003G322300 Sobic001G196100--Sobic003G322300 Sobic001G530800 Sobic001G530800 Sobic001G196100--Sobic001G530800 Sobic008G136800 Sobic008G136800 Sobic006G203900--Sobic008G136800 Sobic009G211900 Sobic009G211900 Sobic006G203900--Sobic009G211900 Sobic006G203900--Sobic001G035400 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G124300 Sobic006G124300 Sobic006G203900--Sobic006G124300 Sobic003G135600 Sobic003G135600 Sobic006G203900--Sobic003G135600 Sobic009G001900 Sobic009G001900 Sobic006G203900--Sobic009G001900 Sobic007G013900 Sobic007G013900 Sobic006G203900--Sobic007G013900 Sobic003G129800 Sobic003G129800 Sobic004G066800--Sobic003G129800 Sobic004G310300 Sobic004G310300 Sobic004G066800--Sobic004G310300 Sobic001G483100 Sobic001G483100 Sobic004G066800--Sobic001G483100 Sobic004G066800--Sobic007G092100 Sobic010G154700 Sobic010G154700 Sobic004G066800--Sobic010G154700 Sobic005G111100 Sobic005G111100 Sobic004G066800--Sobic005G111100 Sobic001G513500 Sobic001G513500 Sobic004G066800--Sobic001G513500 Sobic003G155400 Sobic003G155400 Sobic004G066800--Sobic003G155400 Sobic004G066800--Sobic009G191200 Sobic001G096100--Sobic004G066800 Sobic001G096100--Sobic004G138800 Sobic001G096100--Sobic003G330500 Sobic001G096100--Sobic006G252200 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700
Octagon: transcription factors


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