Gene annotation
Transcriptome id Sobic.001G424500.1,Sobic.001G424500.2
Synonym CYT1, GMP1, Sb01g039900, EMB101, VTC1, SOZ1
Functional annotation mannose-1-phosphate guanyltransferase, putative, expressed
UniProt A0A1B6QP69
Pfam PF00132 PF12804
Panther DB PTHR22572 PTHR22572:SF94
NCBI CDD -
KEGG Orthology K00966; mannose-1-phosphate guanylyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39770 : Glucose-1-phosphate adenylyltransferase family protein
RAP-DB (Rice) LOC_Os03g16150.1,LOC_Os03g16150.3 : mannose-1-phosphate guanyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a001786
Brachypodium KQK22389 , KQK22391 , KQK22390 , PNT77685
Barley HORVU4Hr1G060380.3 , HORVU4Hr1G060380.2 , HORVU4Hr1G060380.1 , HORVU4Hr1G060380.4 , HORVU4Hr1G060380.6 , HORVU4Hr1G060380.5
Wheat TraesCS4D02G211100 , TraesCS4B02G210300 , TraesCS4A02G094000
Populus -


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cDNA sequences
Sobic.001G424500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
2 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
3 Sobic.001G127400 yippee zinc-binding protein, putative, expressed -
4 Sobic.003G101300 expressed protein -
5 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
6 Sobic.007G038800 expressed protein -
7 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
8 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
9 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G230900 - K07910: Ras-related protein Rab-18
11 Sobic.010G154150 - -
12 Sobic.010G228600 LSM domain containing protein, expressed -
13 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
14 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
15 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
16 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
17 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
18 Sobic.003G416600 mitochondrial carrier protein, putative, expressed K15108: SLC25A19, DNC, solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19
19 Sobic.009G100300 expressed protein -
20 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit


Gene co-expression network
sample Sobic001G424500 Sobic001G424500 Sobic009G036900 Sobic009G036900 Sobic001G424500--Sobic009G036900 Sobic009G034400 Sobic009G034400 Sobic001G424500--Sobic009G034400 Sobic001G127400 Sobic001G127400 Sobic001G424500--Sobic001G127400 Sobic003G101300 Sobic003G101300 Sobic001G424500--Sobic003G101300 Sobic003G024800 Sobic003G024800 Sobic001G424500--Sobic003G024800 Sobic007G038800 Sobic007G038800 Sobic001G424500--Sobic007G038800 Sobic004G122000 Sobic004G122000 Sobic001G424500--Sobic004G122000 Sobic002G068300 Sobic002G068300 Sobic001G424500--Sobic002G068300 Sobic002G121000 Sobic002G121000 Sobic001G424500--Sobic002G121000 Sobic009G036900--Sobic002G068300 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic009G036900--Sobic001G424500 Sobic009G034400--Sobic009G036900 Sobic009G034400--Sobic003G024800 Sobic009G034400--Sobic004G122000 Sobic009G034400--Sobic010G071200 Sobic009G034400--Sobic010G228600 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic002G179500 Sobic002G179500 Sobic009G034400--Sobic002G179500 Sobic001G309100 Sobic001G309100 Sobic009G034400--Sobic001G309100 Sobic001G127400--Sobic009G034400 Sobic001G127400--Sobic001G424500 Sobic001G127400--Sobic003G101300 Sobic001G038100 Sobic001G038100 Sobic001G127400--Sobic001G038100 Sobic001G350501 Sobic001G350501 Sobic001G127400--Sobic001G350501 Sobic001G127400--Sobic003G024800 Sobic003G420700 Sobic003G420700 Sobic001G127400--Sobic003G420700 Sobic007G117100 Sobic007G117100 Sobic001G127400--Sobic007G117100 Sobic001G127400--Sobic001G309100 Sobic003G101300--Sobic001G309100 Sobic010G211300 Sobic010G211300 Sobic003G101300--Sobic010G211300 Sobic003G101300--Sobic009G034400 Sobic001G028400 Sobic001G028400 Sobic003G101300--Sobic001G028400 Sobic003G101300--Sobic010G071200 Sobic004G349100 Sobic004G349100 Sobic003G101300--Sobic004G349100 Sobic003G101300--Sobic003G024800 Sobic003G101300--Sobic009G036900 Sobic003G101300--Sobic001G424500 Sobic003G024800--Sobic009G036900 Sobic003G024800--Sobic004G349100 Sobic003G024800--Sobic001G309100 Sobic003G024800--Sobic009G034400 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic003G024800--Sobic010G228600 Sobic007G038800--Sobic009G036900 Sobic007G038800--Sobic002G068300 Sobic003G189900 Sobic003G189900 Sobic007G038800--Sobic003G189900 Sobic007G192100 Sobic007G192100 Sobic007G038800--Sobic007G192100 Sobic007G038800--Sobic009G034400 Sobic006G099800 Sobic006G099800 Sobic007G038800--Sobic006G099800 Sobic009G252800 Sobic009G252800 Sobic007G038800--Sobic009G252800 Sobic008G108500 Sobic008G108500 Sobic007G038800--Sobic008G108500 Sobic001G126200 Sobic001G126200 Sobic007G038800--Sobic001G126200 Sobic004G122000--Sobic009G034400 Sobic004G048700 Sobic004G048700 Sobic004G122000--Sobic004G048700 Sobic004G122000--Sobic009G036900 Sobic002G176400 Sobic002G176400 Sobic004G122000--Sobic002G176400 Sobic003G416600 Sobic003G416600 Sobic004G122000--Sobic003G416600 Sobic001G036700 Sobic001G036700 Sobic004G122000--Sobic001G036700 Sobic004G122000--Sobic008G108500 Sobic004G122000--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic004G122000--Sobic001G285300 Sobic002G068300--Sobic009G036900 Sobic002G068300--Sobic010G228600 Sobic009G016201 Sobic009G016201 Sobic002G068300--Sobic009G016201 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic003G249800 Sobic003G249800 Sobic002G068300--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic002G068300--Sobic002G282400 Sobic001G389400 Sobic001G389400 Sobic002G068300--Sobic001G389400 Sobic002G205300 Sobic002G205300 Sobic002G068300--Sobic002G205300 Sobic002G121000--Sobic007G038800 Sobic002G121000--Sobic009G034400 Sobic002G121000--Sobic009G036900 Sobic002G276900 Sobic002G276900 Sobic002G121000--Sobic002G276900 Sobic002G121000--Sobic002G068300 Sobic002G121000--Sobic004G122000 Sobic001G230900 Sobic001G230900 Sobic002G121000--Sobic001G230900 Sobic002G121000--Sobic003G416600 Sobic002G121000--Sobic001G424500
Octagon: transcription factors


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