Gene annotation
Transcriptome id Sobic.009G100300.1
Synonym Sb09g015880
Functional annotation expressed protein
UniProt C5YW76
Pfam -
Panther DB PTHR36792 PTHR36792:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05360 : -
RAP-DB (Rice) LOC_Os05g27660.1 : expressed protein
MaizeGDB (Corn) Zm00025a043481 , Zm00025a037545
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G100300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
2 Sobic.007G038800 expressed protein -
3 Sobic.009G034400 OsFBX48 - F-box domain containing protein, expressed -
4 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
5 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
6 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
7 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
8 Sobic.002G121000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
10 Sobic.001G424500 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
11 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
12 Sobic.003G416600 mitochondrial carrier protein, putative, expressed K15108: SLC25A19, DNC, solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19
13 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
14 Sobic.004G349800 expressed protein -
15 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.007G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to wheat temperature-induced ipocalin (TaTIL-1)(PubMedID : 16306142)@OsTIL-2 Temperature-induced lipocalin-2, expressed K03098: apolipoprotein D and lipocalin family protein
17 Sobic.009G252800 expressed protein -
18 Sobic.003G434000 expressed protein K06170: PSENEN, presenilin enhancer 2
19 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
20 Sobic.009G160000 basic helix-loop-helix DND-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G100300 Sobic009G100300 Sobic002G276900 Sobic002G276900 Sobic009G100300--Sobic002G276900 Sobic007G038800 Sobic007G038800 Sobic009G100300--Sobic007G038800 Sobic009G034400 Sobic009G034400 Sobic009G100300--Sobic009G034400 Sobic002G359900 Sobic002G359900 Sobic009G100300--Sobic002G359900 Sobic002G068300 Sobic002G068300 Sobic009G100300--Sobic002G068300 Sobic009G036900 Sobic009G036900 Sobic009G100300--Sobic009G036900 Sobic006G099800 Sobic006G099800 Sobic009G100300--Sobic006G099800 Sobic002G121000 Sobic002G121000 Sobic009G100300--Sobic002G121000 Sobic010G253100 Sobic010G253100 Sobic009G100300--Sobic010G253100 Sobic006G261100 Sobic006G261100 Sobic002G276900--Sobic006G261100 Sobic002G276900--Sobic006G099800 Sobic002G276900--Sobic009G100300 Sobic003G416600 Sobic003G416600 Sobic002G276900--Sobic003G416600 Sobic002G276900--Sobic002G121000 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic007G038800--Sobic009G036900 Sobic007G038800--Sobic002G068300 Sobic003G189900 Sobic003G189900 Sobic007G038800--Sobic003G189900 Sobic007G192100 Sobic007G192100 Sobic007G038800--Sobic007G192100 Sobic007G038800--Sobic009G034400 Sobic007G038800--Sobic006G099800 Sobic009G252800 Sobic009G252800 Sobic007G038800--Sobic009G252800 Sobic008G108500 Sobic008G108500 Sobic007G038800--Sobic008G108500 Sobic001G126200 Sobic001G126200 Sobic007G038800--Sobic001G126200 Sobic009G034400--Sobic009G036900 Sobic003G024800 Sobic003G024800 Sobic009G034400--Sobic003G024800 Sobic004G122000 Sobic004G122000 Sobic009G034400--Sobic004G122000 Sobic010G071200 Sobic010G071200 Sobic009G034400--Sobic010G071200 Sobic010G228600 Sobic010G228600 Sobic009G034400--Sobic010G228600 Sobic001G424500 Sobic001G424500 Sobic009G034400--Sobic001G424500 Sobic006G257900 Sobic006G257900 Sobic009G034400--Sobic006G257900 Sobic009G034400--Sobic002G179500 Sobic001G309100 Sobic001G309100 Sobic009G034400--Sobic001G309100 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic003G031200 Sobic003G031200 Sobic002G359900--Sobic003G031200 Sobic001G458200 Sobic001G458200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000 Sobic002G068300--Sobic009G036900 Sobic002G068300--Sobic010G228600 Sobic009G016201 Sobic009G016201 Sobic002G068300--Sobic009G016201 Sobic006G256500 Sobic006G256500 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic003G249800 Sobic003G249800 Sobic002G068300--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic002G068300--Sobic002G282400 Sobic001G389400 Sobic001G389400 Sobic002G068300--Sobic001G389400 Sobic002G205300 Sobic002G205300 Sobic002G068300--Sobic002G205300 Sobic009G036900--Sobic002G068300 Sobic009G036900--Sobic009G034400 Sobic009G036900--Sobic006G256500 Sobic009G036900--Sobic003G024800 Sobic009G036900--Sobic010G228600 Sobic010G039800 Sobic010G039800 Sobic009G036900--Sobic010G039800 Sobic001G529000 Sobic001G529000 Sobic009G036900--Sobic001G529000 Sobic009G036900--Sobic010G071200 Sobic009G036900--Sobic001G424500 Sobic006G099800--Sobic002G276900 Sobic006G099800--Sobic007G038800 Sobic001G148700 Sobic001G148700 Sobic006G099800--Sobic001G148700 Sobic003G227200 Sobic003G227200 Sobic006G099800--Sobic003G227200 Sobic003G434000 Sobic003G434000 Sobic006G099800--Sobic003G434000 Sobic006G099800--Sobic007G192100 Sobic006G099800--Sobic008G108500 Sobic006G099800--Sobic003G031200 Sobic004G028800 Sobic004G028800 Sobic006G099800--Sobic004G028800 Sobic002G121000--Sobic007G038800 Sobic002G121000--Sobic009G034400 Sobic002G121000--Sobic009G036900 Sobic002G121000--Sobic002G276900 Sobic002G121000--Sobic002G068300 Sobic002G121000--Sobic004G122000 Sobic001G230900 Sobic001G230900 Sobic002G121000--Sobic001G230900 Sobic002G121000--Sobic003G416600 Sobic002G121000--Sobic001G424500 Sobic010G253100--Sobic002G359900 Sobic010G253100--Sobic001G038100 Sobic010G253100--Sobic006G120800 Sobic010G253100--Sobic006G261100 Sobic010G253100--Sobic001G458200 Sobic010G253100--Sobic002G204000 Sobic010G253100--Sobic002G276900 Sobic010G253100--Sobic002G403200 Sobic003G192000 Sobic003G192000 Sobic010G253100--Sobic003G192000
Octagon: transcription factors


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