Gene annotation
Transcriptome id Sobic.006G096300.1,Sobic.006G096300.2
Synonym Sb06g018110
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1B6PL59 , A0A1Z5RD32
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF228
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G59960 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os04g37470.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056154
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G096300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G034600 U box protein 8, putative, expressed -
2 Sobic.004G067900 expressed protein -
3 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
4 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
5 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
6 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
7 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
8 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
9 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
10 Sobic.009G100300 expressed protein -
11 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
12 Sobic.004G345100 expressed protein -
13 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.006G244500 nuclease PA3, putative, expressed -
15 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
16 Sobic.004G225800 GEM, putative, expressed -
17 Sobic.003G192000 3-5 exonuclease/ nucleic acid binding protein, putative, expressed K18740: EXD1, exonuclease 3'-5' domain-containing protein 1
18 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
19 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.006G261100 UBX domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G096300 Sobic006G096300 Sobic007G034600 Sobic007G034600 Sobic006G096300--Sobic007G034600 Sobic004G067900 Sobic004G067900 Sobic006G096300--Sobic004G067900 Sobic001G106400 Sobic001G106400 Sobic006G096300--Sobic001G106400 Sobic002G359900 Sobic002G359900 Sobic006G096300--Sobic002G359900 Sobic004G102900 Sobic004G102900 Sobic006G096300--Sobic004G102900 Sobic001G488200 Sobic001G488200 Sobic006G096300--Sobic001G488200 Sobic004G028800 Sobic004G028800 Sobic006G096300--Sobic004G028800 Sobic003G031200 Sobic003G031200 Sobic006G096300--Sobic003G031200 Sobic004G250900 Sobic004G250900 Sobic006G096300--Sobic004G250900 Sobic007G034600--Sobic004G067900 Sobic007G034600--Sobic006G096300 Sobic007G034600--Sobic004G028800 Sobic002G308400 Sobic002G308400 Sobic007G034600--Sobic002G308400 Sobic009G149800 Sobic009G149800 Sobic007G034600--Sobic009G149800 Sobic002G240800 Sobic002G240800 Sobic007G034600--Sobic002G240800 Sobic007G034600--Sobic001G106400 Sobic003G067700 Sobic003G067700 Sobic007G034600--Sobic003G067700 Sobic009G170800 Sobic009G170800 Sobic007G034600--Sobic009G170800 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic007G194100 Sobic007G194100 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic003G295000 Sobic003G295000 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic004G067900--Sobic002G240800 Sobic004G067900--Sobic007G034600 Sobic004G067900--Sobic001G106400 Sobic001G106400--Sobic004G067900 Sobic001G106400--Sobic002G308400 Sobic001G106400--Sobic006G096300 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200 Sobic010G253100 Sobic010G253100 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic006G261100 Sobic006G261100 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic002G359900--Sobic003G031200 Sobic001G458200 Sobic001G458200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000 Sobic004G318400 Sobic004G318400 Sobic004G102900--Sobic004G318400 Sobic007G208200 Sobic007G208200 Sobic004G102900--Sobic007G208200 Sobic001G050900 Sobic001G050900 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic004G102900--Sobic006G066600 Sobic002G240700 Sobic002G240700 Sobic004G102900--Sobic002G240700 Sobic003G304500 Sobic003G304500 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500 Sobic001G488200--Sobic006G244500 Sobic006G151001 Sobic006G151001 Sobic001G488200--Sobic006G151001 Sobic001G488200--Sobic004G028800 Sobic009G009800 Sobic009G009800 Sobic001G488200--Sobic009G009800 Sobic001G488200--Sobic003G062200 Sobic006G206500 Sobic006G206500 Sobic001G488200--Sobic006G206500 Sobic005G158901 Sobic005G158901 Sobic001G488200--Sobic005G158901 Sobic003G421900 Sobic003G421900 Sobic001G488200--Sobic003G421900 Sobic001G488200--Sobic006G066600 Sobic004G028800--Sobic006G244500 Sobic004G028800--Sobic001G488200 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic004G028800--Sobic003G062200 Sobic004G345100 Sobic004G345100 Sobic004G028800--Sobic004G345100 Sobic004G028800--Sobic009G009800 Sobic004G028800--Sobic002G359900 Sobic004G028800--Sobic006G066600 Sobic010G088300 Sobic010G088300 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic002G129200 Sobic002G129200 Sobic003G031200--Sobic002G129200 Sobic002G044000 Sobic002G044000 Sobic003G031200--Sobic002G044000 Sobic003G043400 Sobic003G043400 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic004G250900--Sobic004G028800 Sobic004G250900--Sobic001G488200 Sobic007G097700 Sobic007G097700 Sobic004G250900--Sobic007G097700 Sobic004G250900--Sobic004G345100 Sobic002G276900 Sobic002G276900 Sobic004G250900--Sobic002G276900 Sobic004G256200 Sobic004G256200 Sobic004G250900--Sobic004G256200 Sobic004G250900--Sobic006G096300 Sobic009G025100 Sobic009G025100 Sobic004G250900--Sobic009G025100 Sobic004G250900--Sobic009G009800
Octagon: transcription factors


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