Gene annotation
Transcriptome id Sobic.001G106400.1
Synonym Sb01g009500
Functional annotation serine esterase family protein, putative, expressed
UniProt A0A1B6QIB8
Pfam PF05057
Panther DB PTHR12482 PTHR12482:SF16
NCBI CDD KOG4372; Predicted alpha/beta hydrolase
KEGG Orthology K10606; FANCL, E3 ubiquitin-protein ligase FANCL
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25770 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g51670.1 : serine esterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007977
Brachypodium KQK13427
Barley HORVU4Hr1G009670.2 , HORVU4Hr1G009670.10 , HORVU4Hr1G009670.11 , HORVU4Hr1G009670.13 , HORVU4Hr1G009670.3 , HORVU4Hr1G009670.1 , HORVU4Hr1G009670.6 , HORVU4Hr1G009670.7 , HORVU4Hr1G009670.4 , HORVU4Hr1G009670.5 , HORVU4Hr1G009670.8 , HORVU4Hr1G009670.9
Wheat TraesCS4A02G256900 , TraesCS4A02G256900 , TraesCS4D02G057800 , TraesCS4D02G057800 , TraesCS4B02G057600 , TraesCS4B02G057600 , TraesCS5D02G148300 , TraesCS5D02G148300
Populus -


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cDNA sequences
Sobic.001G106400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G067900 expressed protein -
2 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
5 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.010G168200 HAD superfamily phosphatase, putative, expressed -
7 Sobic.009G232800 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
8 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
9 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
10 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
12 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
13 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP
14 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
15 Sobic.007G034600 U box protein 8, putative, expressed -
16 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
17 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
18 Sobic.009G149800 subtilisin N-terminal Region family protein, expressed -
19 Sobic.001G013800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, expressed -
20 Sobic.003G024500 expressed protein -


Gene co-expression network
sample Sobic001G106400 Sobic001G106400 Sobic004G067900 Sobic004G067900 Sobic001G106400--Sobic004G067900 Sobic002G308400 Sobic002G308400 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic006G066600 Sobic006G066600 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic004G102900 Sobic004G102900 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic007G194100 Sobic007G194100 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic003G295000 Sobic003G295000 Sobic004G067900--Sobic003G295000 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic004G067900--Sobic001G106400 Sobic002G308400--Sobic004G067900 Sobic002G308400--Sobic007G194100 Sobic002G308400--Sobic006G244500 Sobic002G308400--Sobic001G106400 Sobic002G308400--Sobic003G295000 Sobic002G240700 Sobic002G240700 Sobic002G308400--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic002G308400--Sobic010G037200 Sobic001G442200 Sobic001G442200 Sobic002G308400--Sobic001G442200 Sobic002G308400--Sobic006G066600 Sobic006G096300--Sobic007G034600 Sobic006G096300--Sobic004G067900 Sobic006G096300--Sobic001G106400 Sobic002G359900 Sobic002G359900 Sobic006G096300--Sobic002G359900 Sobic006G096300--Sobic004G102900 Sobic001G488200 Sobic001G488200 Sobic006G096300--Sobic001G488200 Sobic004G028800 Sobic004G028800 Sobic006G096300--Sobic004G028800 Sobic003G031200 Sobic003G031200 Sobic006G096300--Sobic003G031200 Sobic004G250900 Sobic004G250900 Sobic006G096300--Sobic004G250900 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic006G066600--Sobic004G067900 Sobic006G066600--Sobic004G102900 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic006G066600--Sobic004G028800 Sobic006G066600--Sobic001G488200 Sobic004G155300 Sobic004G155300 Sobic006G066600--Sobic004G155300 Sobic006G066600--Sobic002G308400 Sobic007G074200 Sobic007G074200 Sobic002G393600--Sobic007G074200 Sobic002G338250 Sobic002G338250 Sobic002G393600--Sobic002G338250 Sobic004G117600 Sobic004G117600 Sobic002G393600--Sobic004G117600 Sobic008G111500 Sobic008G111500 Sobic002G393600--Sobic008G111500 Sobic001G488000 Sobic001G488000 Sobic002G393600--Sobic001G488000 Sobic009G131400 Sobic009G131400 Sobic002G393600--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic006G136800 Sobic006G136800 Sobic002G393600--Sobic006G136800 Sobic001G289400 Sobic001G289400 Sobic010G168200--Sobic001G289400 Sobic010G168200--Sobic001G106400 Sobic001G458200 Sobic001G458200 Sobic010G168200--Sobic001G458200 Sobic010G168200--Sobic006G066600 Sobic001G233532 Sobic001G233532 Sobic010G168200--Sobic001G233532 Sobic009G256200 Sobic009G256200 Sobic010G168200--Sobic009G256200 Sobic002G062500 Sobic002G062500 Sobic010G168200--Sobic002G062500 Sobic008G134900 Sobic008G134900 Sobic010G168200--Sobic008G134900 Sobic010G168200--Sobic002G359900 Sobic001G389900 Sobic001G389900 Sobic009G232800--Sobic001G389900 Sobic003G403400 Sobic003G403400 Sobic009G232800--Sobic003G403400 Sobic002G251900 Sobic002G251900 Sobic009G232800--Sobic002G251900 Sobic006G062800 Sobic006G062800 Sobic009G232800--Sobic006G062800 Sobic002G046100 Sobic002G046100 Sobic009G232800--Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic009G232800--Sobic003G285800 Sobic004G024200 Sobic004G024200 Sobic009G232800--Sobic004G024200 Sobic001G447100 Sobic001G447100 Sobic009G232800--Sobic001G447100 Sobic003G249800 Sobic003G249800 Sobic009G232800--Sobic003G249800 Sobic004G102900--Sobic004G318400 Sobic007G208200 Sobic007G208200 Sobic004G102900--Sobic007G208200 Sobic001G050900 Sobic001G050900 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic004G102900--Sobic006G066600 Sobic004G102900--Sobic002G240700 Sobic003G304500 Sobic003G304500 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500 Sobic010G266300 Sobic010G266300 Sobic009G070200--Sobic010G266300 Sobic001G066700 Sobic001G066700 Sobic009G070200--Sobic001G066700 Sobic002G044000 Sobic002G044000 Sobic009G070200--Sobic002G044000 Sobic009G070200--Sobic008G134900 Sobic002G261900 Sobic002G261900 Sobic009G070200--Sobic002G261900 Sobic003G358300 Sobic003G358300 Sobic009G070200--Sobic003G358300 Sobic009G120100 Sobic009G120100 Sobic009G070200--Sobic009G120100 Sobic003G043400 Sobic003G043400 Sobic009G070200--Sobic003G043400 Sobic007G152400 Sobic007G152400 Sobic009G070200--Sobic007G152400
Octagon: transcription factors


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