Gene annotation
Transcriptome id Sobic.002G308400.1
Synonym ATMYB67, Sb02g033830, ATY53, MYB67
Functional annotation "MYB transcription factor(Ortholog in rice:Huang et al., 2012)" (PubMedID : 31659858)
MYB family transcription factor, putative, expressed
UniProt C5X986
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF487
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12720 : myb domain protein 67
RAP-DB (Rice) LOC_Os07g31470.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a048106 , Zm00025a054415 , Zm00025a002636 , Zm00025a027830 , Zm00025a041887 , Zm00025a049338 , Zm00025a010443 , Zm00025a025715 , Zm00025a011116 , Zm00025a028816
Brachypodium KQJ91191 , KQK15034 , KQK15035 , KQJ86560 , PNT65032 , KQK16124 , PNT75046 , KQK00405 , KQJ91235
Barley HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU2Hr1G027600.3 , HORVU2Hr1G027600.2 , HORVU2Hr1G027600.4 , HORVU1Hr1G079030.2 , HORVU1Hr1G079030.3 , HORVU1Hr1G079030.1 , HORVU1Hr1G079030.6 , HORVU1Hr1G079030.4 , HORVU1Hr1G079030.5 , HORVU3Hr1G066860.9 , HORVU3Hr1G066860.8 , HORVU3Hr1G066860.7 , HORVU3Hr1G066860.6 , HORVU3Hr1G066860.5 , HORVU3Hr1G066860.4 , HORVU3Hr1G066860.3 , HORVU3Hr1G066860.2 , HORVU3Hr1G066860.1 , HORVU2Hr1G051030.3 , HORVU2Hr1G051030.2 , HORVU2Hr1G051030.1 , HORVU2Hr1G051010.1 , HORVU6Hr1G058630.3 , HORVU3Hr1G066860.11 , HORVU3Hr1G066860.10 , HORVU6Hr1G058630.1 , HORVU3Hr1G047290.4 , HORVU3Hr1G047290.3 , HORVU3Hr1G047290.2 , HORVU6Hr1G058640.1 , HORVU6Hr1G058630.2
Wheat TraesCS2B02G252000 , TraesCS7B02G357900 , TraesCS2D02G445900 , TraesCS2D02G158200 , TraesCS1B02G384000 , TraesCS1A02G365900 , TraesCS7A02G458700 , TraesCS2D02G446500 , TraesCS2B02G467700 , TraesCS1D02G371500 , TraesCS3A02G251200 , TraesCS3A02G251200 , TraesCS3B02G224500 , TraesCS1D02G371600 , TraesCS2D02G446400 , TraesCS1A02G366000 , TraesCS2A02G447600 , TraesCS1B02G383700 , TraesCS1D02G371400 , TraesCS2D02G234000 , TraesCS2A02G447300 , TraesCS5B02G105900 , TraesCS2D02G446300 , TraesCS2A02G447400 , TraesCS2A02G152700 , TraesCS3D02G251600 , TraesCS7D02G446700 , TraesCS5D02G113300 , TraesCS3A02G200300 , TraesCS3D02G251600 , TraesCS5A02G101000 , TraesCS2A02G230400 , TraesCS2D02G158300 , TraesCS1B02G383600 , TraesCS2A02G447200 , TraesCS2A02G445500
Populus PNT53230


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G067900 expressed protein -
2 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
3 Sobic.006G244500 nuclease PA3, putative, expressed -
4 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
5 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
6 Sobic.002G240700 OsSub58 - Putative Subtilisin homologue, expressed -
7 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -
8 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
9 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
10 Sobic.005G158801 - -
11 Sobic.004G318400 MTD1, putative, expressed -
12 Sobic.003G437300 sulfotransferase domain containing protein, expressed -
13 Sobic.010G198800 expressed protein -
14 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
17 Sobic.009G025100 transporter, putative, expressed -
18 Sobic.006G206500 60S ribosomal protein L7, putative, expressed -
19 Sobic.007G034600 U box protein 8, putative, expressed -
20 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -


Gene co-expression network
sample Sobic002G308400 Sobic002G308400 Sobic004G067900 Sobic004G067900 Sobic002G308400--Sobic004G067900 Sobic007G194100 Sobic007G194100 Sobic002G308400--Sobic007G194100 Sobic006G244500 Sobic006G244500 Sobic002G308400--Sobic006G244500 Sobic001G106400 Sobic001G106400 Sobic002G308400--Sobic001G106400 Sobic003G295000 Sobic003G295000 Sobic002G308400--Sobic003G295000 Sobic002G240700 Sobic002G240700 Sobic002G308400--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic002G308400--Sobic010G037200 Sobic001G442200 Sobic001G442200 Sobic002G308400--Sobic001G442200 Sobic006G066600 Sobic006G066600 Sobic002G308400--Sobic006G066600 Sobic004G067900--Sobic002G308400 Sobic004G067900--Sobic006G244500 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic004G067900--Sobic003G295000 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic004G067900--Sobic001G106400 Sobic007G194100--Sobic002G240700 Sobic007G194100--Sobic010G037200 Sobic009G199300 Sobic009G199300 Sobic007G194100--Sobic009G199300 Sobic007G194100--Sobic002G308400 Sobic005G098700 Sobic005G098700 Sobic007G194100--Sobic005G098700 Sobic009G025100 Sobic009G025100 Sobic007G194100--Sobic009G025100 Sobic007G194100--Sobic004G067900 Sobic007G208200 Sobic007G208200 Sobic007G194100--Sobic007G208200 Sobic007G194100--Sobic001G442200 Sobic009G009800 Sobic009G009800 Sobic006G244500--Sobic009G009800 Sobic006G244500--Sobic003G062200 Sobic003G376000 Sobic003G376000 Sobic006G244500--Sobic003G376000 Sobic005G158901 Sobic005G158901 Sobic006G244500--Sobic005G158901 Sobic006G151001 Sobic006G151001 Sobic006G244500--Sobic006G151001 Sobic008G037000 Sobic008G037000 Sobic006G244500--Sobic008G037000 Sobic006G096200 Sobic006G096200 Sobic006G244500--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic006G244500--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic006G244500--Sobic001G277800 Sobic001G106400--Sobic004G067900 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic004G102900 Sobic004G102900 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200 Sobic001G488000 Sobic001G488000 Sobic003G295000--Sobic001G488000 Sobic003G295000--Sobic009G199300 Sobic003G295000--Sobic004G067900 Sobic003G295000--Sobic003G062200 Sobic001G050900 Sobic001G050900 Sobic003G295000--Sobic001G050900 Sobic003G295000--Sobic002G308400 Sobic010G212000 Sobic010G212000 Sobic003G295000--Sobic010G212000 Sobic003G295000--Sobic007G194100 Sobic010G196800 Sobic010G196800 Sobic003G295000--Sobic010G196800 Sobic002G240700--Sobic007G194100 Sobic002G240700--Sobic009G199300 Sobic002G240700--Sobic004G067900 Sobic002G240700--Sobic005G098700 Sobic002G240700--Sobic004G102900 Sobic002G240700--Sobic007G208200 Sobic002G240700--Sobic002G308400 Sobic003G304500 Sobic003G304500 Sobic002G240700--Sobic003G304500 Sobic004G210000 Sobic004G210000 Sobic002G240700--Sobic004G210000 Sobic010G037200--Sobic009G025100 Sobic008G039700 Sobic008G039700 Sobic010G037200--Sobic008G039700 Sobic010G227400 Sobic010G227400 Sobic010G037200--Sobic010G227400 Sobic010G085700 Sobic010G085700 Sobic010G037200--Sobic010G085700 Sobic009G040000 Sobic009G040000 Sobic010G037200--Sobic009G040000 Sobic001G068200 Sobic001G068200 Sobic010G037200--Sobic001G068200 Sobic001G253400 Sobic001G253400 Sobic010G037200--Sobic001G253400 Sobic001G158600 Sobic001G158600 Sobic010G037200--Sobic001G158600 Sobic006G051750 Sobic006G051750 Sobic010G037200--Sobic006G051750 Sobic007G150700 Sobic007G150700 Sobic001G442200--Sobic007G150700 Sobic004G196800 Sobic004G196800 Sobic001G442200--Sobic004G196800 Sobic001G442200--Sobic005G098700 Sobic010G168500 Sobic010G168500 Sobic001G442200--Sobic010G168500 Sobic007G172100 Sobic007G172100 Sobic001G442200--Sobic007G172100 Sobic001G442200--Sobic010G037200 Sobic002G293100 Sobic002G293100 Sobic001G442200--Sobic002G293100 Sobic005G171800 Sobic005G171800 Sobic001G442200--Sobic005G171800 Sobic001G442200--Sobic007G194100 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic006G066600--Sobic004G067900 Sobic006G066600--Sobic004G102900 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic004G028800 Sobic004G028800 Sobic006G066600--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic006G066600--Sobic001G488200 Sobic004G155300 Sobic004G155300 Sobic006G066600--Sobic004G155300 Sobic006G066600--Sobic002G308400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.