Gene annotation
Transcriptome id Sobic.010G198800.1
Synonym GDU5, Sb10g024750, AtGDU5
Functional annotation expressed protein
UniProt C5Z699
Pfam -
Panther DB PTHR33228 PTHR33228:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24762 : glutamine dumper 4
RAP-DB (Rice) LOC_Os06g42660.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK17596
Barley HORVU7Hr1G092720.2 , HORVU7Hr1G092720.1 , HORVU7Hr1G092710.1 , HORVU0Hr1G020740.2 , HORVU0Hr1G020740.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
2 Sobic.004G067900 expressed protein -
3 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G240700 OsSub58 - Putative Subtilisin homologue, expressed -
5 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.007G208200 expressed protein -
7 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
9 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
11 Sobic.002G419500 HAD superfamily phosphatase, putative, expressed -
12 Sobic.004G017600 expressed protein -
13 Sobic.003G304500 expressed protein -
14 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -
15 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
16 Sobic.001G154400 expp1 protein precursor, putative, expressed -
17 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
18 Sobic.004G318400 MTD1, putative, expressed -
19 Sobic.010G212000 haemolysin-III, putative, expressed K07297: adiponectin receptor
20 Sobic.002G044100 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G198800 Sobic010G198800 Sobic007G194100 Sobic007G194100 Sobic010G198800--Sobic007G194100 Sobic004G067900 Sobic004G067900 Sobic010G198800--Sobic004G067900 Sobic002G308400 Sobic002G308400 Sobic010G198800--Sobic002G308400 Sobic002G240700 Sobic002G240700 Sobic010G198800--Sobic002G240700 Sobic009G170800 Sobic009G170800 Sobic010G198800--Sobic009G170800 Sobic007G208200 Sobic007G208200 Sobic010G198800--Sobic007G208200 Sobic009G199300 Sobic009G199300 Sobic010G198800--Sobic009G199300 Sobic003G295000 Sobic003G295000 Sobic010G198800--Sobic003G295000 Sobic006G096300 Sobic006G096300 Sobic010G198800--Sobic006G096300 Sobic007G194100--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic007G194100--Sobic010G037200 Sobic007G194100--Sobic009G199300 Sobic007G194100--Sobic002G308400 Sobic005G098700 Sobic005G098700 Sobic007G194100--Sobic005G098700 Sobic009G025100 Sobic009G025100 Sobic007G194100--Sobic009G025100 Sobic007G194100--Sobic004G067900 Sobic007G194100--Sobic007G208200 Sobic001G442200 Sobic001G442200 Sobic007G194100--Sobic001G442200 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic001G106400 Sobic001G106400 Sobic004G067900--Sobic001G106400 Sobic002G308400--Sobic004G067900 Sobic002G308400--Sobic007G194100 Sobic002G308400--Sobic006G244500 Sobic002G308400--Sobic001G106400 Sobic002G308400--Sobic003G295000 Sobic002G308400--Sobic002G240700 Sobic002G308400--Sobic010G037200 Sobic002G308400--Sobic001G442200 Sobic002G308400--Sobic006G066600 Sobic002G240700--Sobic007G194100 Sobic002G240700--Sobic009G199300 Sobic002G240700--Sobic004G067900 Sobic002G240700--Sobic005G098700 Sobic004G102900 Sobic004G102900 Sobic002G240700--Sobic004G102900 Sobic002G240700--Sobic007G208200 Sobic002G240700--Sobic002G308400 Sobic003G304500 Sobic003G304500 Sobic002G240700--Sobic003G304500 Sobic004G210000 Sobic004G210000 Sobic002G240700--Sobic004G210000 Sobic009G170800--Sobic004G067900 Sobic009G216800 Sobic009G216800 Sobic009G170800--Sobic009G216800 Sobic009G170800--Sobic002G308400 Sobic010G196800 Sobic010G196800 Sobic009G170800--Sobic010G196800 Sobic002G419500 Sobic002G419500 Sobic009G170800--Sobic002G419500 Sobic004G318400 Sobic004G318400 Sobic009G170800--Sobic004G318400 Sobic009G170800--Sobic006G066600 Sobic009G170800--Sobic001G106400 Sobic009G170800--Sobic004G102900 Sobic003G324300 Sobic003G324300 Sobic007G208200--Sobic003G324300 Sobic007G208200--Sobic004G318400 Sobic007G208200--Sobic004G102900 Sobic007G208200--Sobic007G194100 Sobic007G208200--Sobic009G199300 Sobic007G150700 Sobic007G150700 Sobic007G208200--Sobic007G150700 Sobic007G208200--Sobic003G304500 Sobic007G182500 Sobic007G182500 Sobic007G208200--Sobic007G182500 Sobic005G064200 Sobic005G064200 Sobic007G208200--Sobic005G064200 Sobic009G199300--Sobic007G194100 Sobic010G209300 Sobic010G209300 Sobic009G199300--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic009G199300--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic009G199300--Sobic007G123000 Sobic007G147300 Sobic007G147300 Sobic009G199300--Sobic007G147300 Sobic009G021300 Sobic009G021300 Sobic009G199300--Sobic009G021300 Sobic002G408700 Sobic002G408700 Sobic009G199300--Sobic002G408700 Sobic005G075000 Sobic005G075000 Sobic009G199300--Sobic005G075000 Sobic005G001500 Sobic005G001500 Sobic009G199300--Sobic005G001500 Sobic001G488000 Sobic001G488000 Sobic003G295000--Sobic001G488000 Sobic003G295000--Sobic009G199300 Sobic003G295000--Sobic004G067900 Sobic003G295000--Sobic003G062200 Sobic001G050900 Sobic001G050900 Sobic003G295000--Sobic001G050900 Sobic003G295000--Sobic002G308400 Sobic010G212000 Sobic010G212000 Sobic003G295000--Sobic010G212000 Sobic003G295000--Sobic007G194100 Sobic003G295000--Sobic010G196800 Sobic006G096300--Sobic007G034600 Sobic006G096300--Sobic004G067900 Sobic006G096300--Sobic001G106400 Sobic002G359900 Sobic002G359900 Sobic006G096300--Sobic002G359900 Sobic006G096300--Sobic004G102900 Sobic001G488200 Sobic001G488200 Sobic006G096300--Sobic001G488200 Sobic004G028800 Sobic004G028800 Sobic006G096300--Sobic004G028800 Sobic003G031200 Sobic003G031200 Sobic006G096300--Sobic003G031200 Sobic004G250900 Sobic004G250900 Sobic006G096300--Sobic004G250900
Octagon: transcription factors


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