Gene annotation
Transcriptome id Sobic.007G208200.1
Synonym Sb07g027540
Functional annotation expressed protein
UniProt C5YIP8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g40120.1 : expressed protein
MaizeGDB (Corn) Zm00025a005119
Brachypodium KQJ98947 , KQJ98948
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G324300 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
2 Sobic.004G318400 MTD1, putative, expressed -
3 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
4 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
5 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
7 Sobic.003G304500 expressed protein -
8 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
9 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
10 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
11 Sobic.005G098700 glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
13 Sobic.009G025100 transporter, putative, expressed -
14 Sobic.004G274500 OsFBD8 - F-box and FBD domain containing protein, expressed -
15 Sobic.002G240700 OsSub58 - Putative Subtilisin homologue, expressed -
16 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
17 Sobic.003G430100 Phosphoesterase family protein(PubMedID : 24906815)@phosphoesterase family protein, putative, expressed K01114: phospholipase C
18 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
19 Sobic.004G067900 expressed protein -
20 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic007G208200 Sobic007G208200 Sobic003G324300 Sobic003G324300 Sobic007G208200--Sobic003G324300 Sobic004G318400 Sobic004G318400 Sobic007G208200--Sobic004G318400 Sobic004G102900 Sobic004G102900 Sobic007G208200--Sobic004G102900 Sobic007G194100 Sobic007G194100 Sobic007G208200--Sobic007G194100 Sobic009G199300 Sobic009G199300 Sobic007G208200--Sobic009G199300 Sobic007G150700 Sobic007G150700 Sobic007G208200--Sobic007G150700 Sobic003G304500 Sobic003G304500 Sobic007G208200--Sobic003G304500 Sobic007G182500 Sobic007G182500 Sobic007G208200--Sobic007G182500 Sobic005G064200 Sobic005G064200 Sobic007G208200--Sobic005G064200 Sobic003G324300--Sobic007G208200 Sobic003G324300--Sobic005G064200 Sobic003G324300--Sobic004G318400 Sobic003G324300--Sobic009G199300 Sobic003G324300--Sobic007G182500 Sobic007G012400 Sobic007G012400 Sobic003G324300--Sobic007G012400 Sobic007G018000 Sobic007G018000 Sobic003G324300--Sobic007G018000 Sobic006G143300 Sobic006G143300 Sobic003G324300--Sobic006G143300 Sobic009G031600 Sobic009G031600 Sobic003G324300--Sobic009G031600 Sobic004G318400--Sobic004G102900 Sobic004G318400--Sobic007G208200 Sobic004G318400--Sobic003G304500 Sobic004G274500 Sobic004G274500 Sobic004G318400--Sobic004G274500 Sobic006G066600 Sobic006G066600 Sobic004G318400--Sobic006G066600 Sobic004G196800 Sobic004G196800 Sobic004G318400--Sobic004G196800 Sobic009G025100 Sobic009G025100 Sobic004G318400--Sobic009G025100 Sobic004G155300 Sobic004G155300 Sobic004G318400--Sobic004G155300 Sobic004G318400--Sobic007G194100 Sobic004G102900--Sobic004G318400 Sobic004G102900--Sobic007G208200 Sobic001G050900 Sobic001G050900 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic004G102900--Sobic006G066600 Sobic002G240700 Sobic002G240700 Sobic004G102900--Sobic002G240700 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500 Sobic007G194100--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic007G194100--Sobic010G037200 Sobic007G194100--Sobic009G199300 Sobic002G308400 Sobic002G308400 Sobic007G194100--Sobic002G308400 Sobic005G098700 Sobic005G098700 Sobic007G194100--Sobic005G098700 Sobic007G194100--Sobic009G025100 Sobic004G067900 Sobic004G067900 Sobic007G194100--Sobic004G067900 Sobic007G194100--Sobic007G208200 Sobic001G442200 Sobic001G442200 Sobic007G194100--Sobic001G442200 Sobic009G199300--Sobic007G194100 Sobic010G209300 Sobic010G209300 Sobic009G199300--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic009G199300--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic009G199300--Sobic007G123000 Sobic007G147300 Sobic007G147300 Sobic009G199300--Sobic007G147300 Sobic009G021300 Sobic009G021300 Sobic009G199300--Sobic009G021300 Sobic002G408700 Sobic002G408700 Sobic009G199300--Sobic002G408700 Sobic005G075000 Sobic005G075000 Sobic009G199300--Sobic005G075000 Sobic005G001500 Sobic005G001500 Sobic009G199300--Sobic005G001500 Sobic007G150700--Sobic001G442200 Sobic007G150700--Sobic004G196800 Sobic005G171800 Sobic005G171800 Sobic007G150700--Sobic005G171800 Sobic004G212350 Sobic004G212350 Sobic007G150700--Sobic004G212350 Sobic005G032500 Sobic005G032500 Sobic007G150700--Sobic005G032500 Sobic010G060100 Sobic010G060100 Sobic007G150700--Sobic010G060100 Sobic002G100000 Sobic002G100000 Sobic007G150700--Sobic002G100000 Sobic001G425900 Sobic001G425900 Sobic007G150700--Sobic001G425900 Sobic010G084800 Sobic010G084800 Sobic007G150700--Sobic010G084800 Sobic003G304500--Sobic009G025100 Sobic009G033500 Sobic009G033500 Sobic003G304500--Sobic009G033500 Sobic001G170500 Sobic001G170500 Sobic003G304500--Sobic001G170500 Sobic003G304500--Sobic004G274500 Sobic003G304500--Sobic004G196800 Sobic003G304500--Sobic004G155300 Sobic003G304500--Sobic004G318400 Sobic003G304500--Sobic010G037200 Sobic007G091200 Sobic007G091200 Sobic003G304500--Sobic007G091200 Sobic007G182500--Sobic001G170500 Sobic007G182500--Sobic007G018000 Sobic007G182500--Sobic009G025100 Sobic007G182500--Sobic004G274500 Sobic004G250600 Sobic004G250600 Sobic007G182500--Sobic004G250600 Sobic007G182500--Sobic003G304500 Sobic007G182500--Sobic007G208200 Sobic004G254400 Sobic004G254400 Sobic007G182500--Sobic004G254400 Sobic001G368900 Sobic001G368900 Sobic007G182500--Sobic001G368900 Sobic005G064200--Sobic007G018000 Sobic005G064200--Sobic003G324300 Sobic005G064200--Sobic004G318400 Sobic005G064200--Sobic007G208200 Sobic005G064200--Sobic005G098700 Sobic005G064200--Sobic001G050900 Sobic005G064200--Sobic009G199300 Sobic005G064200--Sobic007G194100 Sobic010G196800 Sobic010G196800 Sobic005G064200--Sobic010G196800
Octagon: transcription factors


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