Gene annotation
Transcriptome id Sobic.003G430100.1
Synonym Sb03g046200, NPC2
Functional annotation Phosphoesterase family protein (PubMedID : 24906815)
phosphoesterase family protein, putative, expressed
UniProt C5XIH4
Pfam PF04185
Panther DB PTHR31956 PTHR31956:SF10
NCBI CDD -
KEGG Orthology K01114; phospholipase C
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT2G26870 : non-specific phospholipase C2
RAP-DB (Rice) LOC_Os01g72520.1 : phosphoesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023855 , Zm00025a025938
Brachypodium KQK11606 , KQK02781
Barley HORVU1Hr1G085090.2 , HORVU1Hr1G085090.1 , HORVU3Hr1G109160.4 , HORVU3Hr1G109160.5 , HORVU3Hr1G109160.2 , HORVU3Hr1G109160.3 , HORVU3Hr1G109160.1
Wheat TraesCS5B02G503200 , TraesCS4A02G369500 , TraesCS3A02G083200 , TraesCS5A02G489800 , TraesCS3A02G439600 , TraesCS3A02G439600 , TraesCS4B02G015300 , TraesCS3D02G499600 , TraesCS3D02G499600 , TraesCS3B02G553200 , TraesCS3B02G098100 , TraesCS3A02G492100 , TraesCS5D02G504100 , TraesCS3D02G083000 , TraesCS3B02G552800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G430100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G210000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
2 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
3 Sobic.010G047300 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.009G033500 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.002G293100 ZOS9-17 - C2H2 zinc finger protein, expressed -
6 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
7 Sobic.010G084800 - -
8 Sobic.002G247300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
9 Sobic.009G025100 transporter, putative, expressed -
10 Sobic.007G041200 cytochrome P450, putative, expressed -
11 Sobic.005G077900 OsFBX411 - F-box domain containing protein, expressed -
12 Sobic.005G146966 - -
13 Sobic.005G033600 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.010G060100 leucoanthocyanidin dioxygenase, putative, expressed -
15 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
16 Sobic.008G116100 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
17 Sobic.002G161600 B3 DNA binding domain containing protein, expressed -
18 Sobic.005G171800 OsFBDUF20 - F-box and DUF domain containing protein, expressed -
19 Sobic.004G171600 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.003G207100 expressed protein -


Gene co-expression network
sample Sobic003G430100 Sobic003G430100 Sobic004G210000 Sobic004G210000 Sobic003G430100--Sobic004G210000 Sobic004G196800 Sobic004G196800 Sobic003G430100--Sobic004G196800 Sobic010G047300 Sobic010G047300 Sobic003G430100--Sobic010G047300 Sobic009G033500 Sobic009G033500 Sobic003G430100--Sobic009G033500 Sobic002G293100 Sobic002G293100 Sobic003G430100--Sobic002G293100 Sobic006G186300 Sobic006G186300 Sobic003G430100--Sobic006G186300 Sobic010G084800 Sobic010G084800 Sobic003G430100--Sobic010G084800 Sobic002G247300 Sobic002G247300 Sobic003G430100--Sobic002G247300 Sobic009G025100 Sobic009G025100 Sobic003G430100--Sobic009G025100 Sobic004G210000--Sobic004G196800 Sobic004G210000--Sobic003G430100 Sobic008G116100 Sobic008G116100 Sobic004G210000--Sobic008G116100 Sobic010G020100 Sobic010G020100 Sobic004G210000--Sobic010G020100 Sobic007G041200 Sobic007G041200 Sobic004G210000--Sobic007G041200 Sobic004G210000--Sobic010G084800 Sobic007G150700 Sobic007G150700 Sobic004G210000--Sobic007G150700 Sobic004G210000--Sobic010G047300 Sobic008G109600 Sobic008G109600 Sobic004G210000--Sobic008G109600 Sobic004G196800--Sobic009G025100 Sobic004G196800--Sobic004G210000 Sobic006G015800 Sobic006G015800 Sobic004G196800--Sobic006G015800 Sobic010G207400 Sobic010G207400 Sobic004G196800--Sobic010G207400 Sobic004G196800--Sobic010G047300 Sobic005G077900 Sobic005G077900 Sobic004G196800--Sobic005G077900 Sobic004G196800--Sobic002G293100 Sobic004G038900 Sobic004G038900 Sobic004G196800--Sobic004G038900 Sobic004G196800--Sobic009G033500 Sobic009G058300 Sobic009G058300 Sobic010G047300--Sobic009G058300 Sobic006G264800 Sobic006G264800 Sobic010G047300--Sobic006G264800 Sobic002G172100 Sobic002G172100 Sobic010G047300--Sobic002G172100 Sobic001G489075 Sobic001G489075 Sobic010G047300--Sobic001G489075 Sobic010G047300--Sobic008G109600 Sobic002G108300 Sobic002G108300 Sobic010G047300--Sobic002G108300 Sobic002G172200 Sobic002G172200 Sobic010G047300--Sobic002G172200 Sobic001G284700 Sobic001G284700 Sobic010G047300--Sobic001G284700 Sobic002G015400 Sobic002G015400 Sobic010G047300--Sobic002G015400 Sobic007G091200 Sobic007G091200 Sobic009G033500--Sobic007G091200 Sobic009G033500--Sobic007G041200 Sobic010G060100 Sobic010G060100 Sobic009G033500--Sobic010G060100 Sobic001G425900 Sobic001G425900 Sobic009G033500--Sobic001G425900 Sobic010G118200 Sobic010G118200 Sobic009G033500--Sobic010G118200 Sobic009G033500--Sobic010G084800 Sobic007G205400 Sobic007G205400 Sobic009G033500--Sobic007G205400 Sobic004G133600 Sobic004G133600 Sobic009G033500--Sobic004G133600 Sobic001G518700 Sobic001G518700 Sobic009G033500--Sobic001G518700 Sobic004G171600 Sobic004G171600 Sobic002G293100--Sobic004G171600 Sobic002G293100--Sobic005G077900 Sobic005G174000 Sobic005G174000 Sobic002G293100--Sobic005G174000 Sobic001G200900 Sobic001G200900 Sobic002G293100--Sobic001G200900 Sobic005G021100 Sobic005G021100 Sobic002G293100--Sobic005G021100 Sobic009G061900 Sobic009G061900 Sobic002G293100--Sobic009G061900 Sobic002G293100--Sobic001G489075 Sobic002G089500 Sobic002G089500 Sobic002G293100--Sobic002G089500 Sobic001G233600 Sobic001G233600 Sobic002G293100--Sobic001G233600 Sobic006G186300--Sobic010G047300 Sobic006G186300--Sobic007G041200 Sobic002G122000 Sobic002G122000 Sobic006G186300--Sobic002G122000 Sobic004G075700 Sobic004G075700 Sobic006G186300--Sobic004G075700 Sobic002G230400 Sobic002G230400 Sobic006G186300--Sobic002G230400 Sobic006G186300--Sobic010G084800 Sobic001G305100 Sobic001G305100 Sobic006G186300--Sobic001G305100 Sobic005G131800 Sobic005G131800 Sobic006G186300--Sobic005G131800 Sobic005G171800 Sobic005G171800 Sobic006G186300--Sobic005G171800 Sobic010G084800--Sobic010G047300 Sobic010G084800--Sobic008G109600 Sobic002G161600 Sobic002G161600 Sobic010G084800--Sobic002G161600 Sobic001G274025 Sobic001G274025 Sobic010G084800--Sobic001G274025 Sobic010G084800--Sobic006G264800 Sobic009G021400 Sobic009G021400 Sobic010G084800--Sobic009G021400 Sobic010G084800--Sobic007G205400 Sobic010G084800--Sobic010G060100 Sobic002G409300 Sobic002G409300 Sobic010G084800--Sobic002G409300 Sobic002G247300--Sobic007G091200 Sobic002G247300--Sobic009G025100 Sobic002G247300--Sobic010G118200 Sobic001G170500 Sobic001G170500 Sobic002G247300--Sobic001G170500 Sobic010G168500 Sobic010G168500 Sobic002G247300--Sobic010G168500 Sobic002G247300--Sobic001G518700 Sobic002G247300--Sobic009G033500 Sobic002G247300--Sobic010G207400 Sobic005G003750 Sobic005G003750 Sobic002G247300--Sobic005G003750 Sobic009G025100--Sobic001G170500 Sobic008G039700 Sobic008G039700 Sobic009G025100--Sobic008G039700 Sobic010G037200 Sobic010G037200 Sobic009G025100--Sobic010G037200 Sobic009G025100--Sobic010G168500 Sobic008G081700 Sobic008G081700 Sobic009G025100--Sobic008G081700 Sobic009G071600 Sobic009G071600 Sobic009G025100--Sobic009G071600 Sobic010G227400 Sobic010G227400 Sobic009G025100--Sobic010G227400 Sobic008G088450 Sobic008G088450 Sobic009G025100--Sobic008G088450 Sobic002G338600 Sobic002G338600 Sobic009G025100--Sobic002G338600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.