Gene annotation
Transcriptome id Sobic.002G240700.1
Synonym SBT5.4, ATSBT5.4, Sb02g027810
Functional annotation OsSub58 - Putative Subtilisin homologue, expressed
UniProt A0A1B6QD63
Pfam PF05922 PF02225 PF00082
Panther DB PTHR10795 PTHR10795:SF362
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G04160 : Subtilisin-like serine endopeptidase family protein
RAP-DB (Rice) LOC_Os09g30250.1 : OsSub58 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a019587 , Zm00025a047390
Brachypodium PNT64802
Barley HORVU5Hr1G071510.9 , HORVU5Hr1G071510.8 , HORVU5Hr1G071510.5 , HORVU5Hr1G071510.1 , HORVU5Hr1G071510.2 , HORVU5Hr1G071510.18 , HORVU5Hr1G071510.11 , HORVU5Hr1G071510.12 , HORVU5Hr1G071510.16 , HORVU5Hr1G071510.20 , HORVU5Hr1G071510.19 , HORVU5Hr1G071510.17 , HORVU5Hr1G071510.10 , HORVU5Hr1G071510.13 , HORVU2Hr1G005560.1 , HORVU2Hr1G005560.3 , HORVU2Hr1G005560.4 , HORVU5Hr1G071510.15 , HORVU5Hr1G071510.14
Wheat TraesCS6A02G161600 , TraesCS5D02G264000 , TraesCS2A02G037100 , TraesCS2A02G037100 , TraesCS2D02G036400 , TraesCS5A02G255900 , TraesCS5B02G255200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
2 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.004G067900 expressed protein -
4 Sobic.005G098700 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
6 Sobic.007G208200 expressed protein -
7 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G304500 expressed protein -
9 Sobic.004G210000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
10 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
11 Sobic.005G003750 - -
12 Sobic.004G318400 MTD1, putative, expressed -
13 Sobic.001G249200 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
14 Sobic.003G149600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
15 Sobic.009G025100 transporter, putative, expressed -
16 Sobic.006G244500 nuclease PA3, putative, expressed -
17 Sobic.003G437300 sulfotransferase domain containing protein, expressed -
18 Sobic.003G378700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
19 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
20 Sobic.007G054700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma


Gene co-expression network
sample Sobic002G240700 Sobic002G240700 Sobic007G194100 Sobic007G194100 Sobic002G240700--Sobic007G194100 Sobic009G199300 Sobic009G199300 Sobic002G240700--Sobic009G199300 Sobic004G067900 Sobic004G067900 Sobic002G240700--Sobic004G067900 Sobic005G098700 Sobic005G098700 Sobic002G240700--Sobic005G098700 Sobic004G102900 Sobic004G102900 Sobic002G240700--Sobic004G102900 Sobic007G208200 Sobic007G208200 Sobic002G240700--Sobic007G208200 Sobic002G308400 Sobic002G308400 Sobic002G240700--Sobic002G308400 Sobic003G304500 Sobic003G304500 Sobic002G240700--Sobic003G304500 Sobic004G210000 Sobic004G210000 Sobic002G240700--Sobic004G210000 Sobic007G194100--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic007G194100--Sobic010G037200 Sobic007G194100--Sobic009G199300 Sobic007G194100--Sobic002G308400 Sobic007G194100--Sobic005G098700 Sobic009G025100 Sobic009G025100 Sobic007G194100--Sobic009G025100 Sobic007G194100--Sobic004G067900 Sobic007G194100--Sobic007G208200 Sobic001G442200 Sobic001G442200 Sobic007G194100--Sobic001G442200 Sobic009G199300--Sobic007G194100 Sobic010G209300 Sobic010G209300 Sobic009G199300--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic009G199300--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic009G199300--Sobic007G123000 Sobic007G147300 Sobic007G147300 Sobic009G199300--Sobic007G147300 Sobic009G021300 Sobic009G021300 Sobic009G199300--Sobic009G021300 Sobic002G408700 Sobic002G408700 Sobic009G199300--Sobic002G408700 Sobic005G075000 Sobic005G075000 Sobic009G199300--Sobic005G075000 Sobic005G001500 Sobic005G001500 Sobic009G199300--Sobic005G001500 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic003G295000 Sobic003G295000 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic001G106400 Sobic001G106400 Sobic004G067900--Sobic001G106400 Sobic002G161600 Sobic002G161600 Sobic005G098700--Sobic002G161600 Sobic006G264800 Sobic006G264800 Sobic005G098700--Sobic006G264800 Sobic010G031400 Sobic010G031400 Sobic005G098700--Sobic010G031400 Sobic002G172100 Sobic002G172100 Sobic005G098700--Sobic002G172100 Sobic001G261700 Sobic001G261700 Sobic005G098700--Sobic001G261700 Sobic009G057100 Sobic009G057100 Sobic005G098700--Sobic009G057100 Sobic005G147500 Sobic005G147500 Sobic005G098700--Sobic005G147500 Sobic003G294800 Sobic003G294800 Sobic005G098700--Sobic003G294800 Sobic009G058300 Sobic009G058300 Sobic005G098700--Sobic009G058300 Sobic004G318400 Sobic004G318400 Sobic004G102900--Sobic004G318400 Sobic004G102900--Sobic007G208200 Sobic001G050900 Sobic001G050900 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic004G102900--Sobic006G066600 Sobic004G102900--Sobic002G240700 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500 Sobic003G324300 Sobic003G324300 Sobic007G208200--Sobic003G324300 Sobic007G208200--Sobic004G318400 Sobic007G208200--Sobic004G102900 Sobic007G208200--Sobic007G194100 Sobic007G208200--Sobic009G199300 Sobic007G150700 Sobic007G150700 Sobic007G208200--Sobic007G150700 Sobic007G208200--Sobic003G304500 Sobic007G182500 Sobic007G182500 Sobic007G208200--Sobic007G182500 Sobic005G064200 Sobic005G064200 Sobic007G208200--Sobic005G064200 Sobic002G308400--Sobic004G067900 Sobic002G308400--Sobic007G194100 Sobic002G308400--Sobic006G244500 Sobic002G308400--Sobic001G106400 Sobic002G308400--Sobic003G295000 Sobic002G308400--Sobic002G240700 Sobic002G308400--Sobic010G037200 Sobic002G308400--Sobic001G442200 Sobic002G308400--Sobic006G066600 Sobic003G304500--Sobic009G025100 Sobic009G033500 Sobic009G033500 Sobic003G304500--Sobic009G033500 Sobic001G170500 Sobic001G170500 Sobic003G304500--Sobic001G170500 Sobic004G274500 Sobic004G274500 Sobic003G304500--Sobic004G274500 Sobic004G196800 Sobic004G196800 Sobic003G304500--Sobic004G196800 Sobic004G155300 Sobic004G155300 Sobic003G304500--Sobic004G155300 Sobic003G304500--Sobic004G318400 Sobic003G304500--Sobic010G037200 Sobic007G091200 Sobic007G091200 Sobic003G304500--Sobic007G091200 Sobic004G210000--Sobic004G196800 Sobic003G430100 Sobic003G430100 Sobic004G210000--Sobic003G430100 Sobic008G116100 Sobic008G116100 Sobic004G210000--Sobic008G116100 Sobic010G020100 Sobic010G020100 Sobic004G210000--Sobic010G020100 Sobic007G041200 Sobic007G041200 Sobic004G210000--Sobic007G041200 Sobic010G084800 Sobic010G084800 Sobic004G210000--Sobic010G084800 Sobic004G210000--Sobic007G150700 Sobic010G047300 Sobic010G047300 Sobic004G210000--Sobic010G047300 Sobic008G109600 Sobic008G109600 Sobic004G210000--Sobic008G109600
Octagon: transcription factors


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