Gene annotation
Transcriptome id Sobic.004G318400.1
Synonym Sb04g034930
Functional annotation MTD1, putative, expressed
UniProt C5XTL9
Pfam -
Panther DB PTHR33172 PTHR33172:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43850 : -
RAP-DB (Rice) LOC_Os02g53830.1 : MTD1, putative, expressed
MaizeGDB (Corn) Zm00025a022346 , Zm00025a033028
Brachypodium KQK01626
Barley HORVU6Hr1G081630.1 , HORVU6Hr1G081600.1 , HORVU6Hr1G081600.2
Wheat TraesCS6D02G318600 , TraesCS6A02G337700 , TraesCS6B02G368400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
2 Sobic.007G208200 expressed protein -
3 Sobic.003G304500 expressed protein -
4 Sobic.004G274500 OsFBD8 - F-box and FBD domain containing protein, expressed -
5 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
6 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
7 Sobic.009G025100 transporter, putative, expressed -
8 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
10 Sobic.001G154400 expp1 protein precursor, putative, expressed -
11 Sobic.003G217500 expressed protein -
12 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
13 Sobic.003G324300 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
14 Sobic.007G182500 bZIP family transcription factor, putative, expressed -
15 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -
16 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
17 Sobic.004G067900 expressed protein -
18 Sobic.010G193700 expressed protein -
19 Sobic.007G018000 expansin precursor, putative, expressed -
20 Sobic.006G244500 nuclease PA3, putative, expressed -


Gene co-expression network
sample Sobic004G318400 Sobic004G318400 Sobic004G102900 Sobic004G102900 Sobic004G318400--Sobic004G102900 Sobic007G208200 Sobic007G208200 Sobic004G318400--Sobic007G208200 Sobic003G304500 Sobic003G304500 Sobic004G318400--Sobic003G304500 Sobic004G274500 Sobic004G274500 Sobic004G318400--Sobic004G274500 Sobic006G066600 Sobic006G066600 Sobic004G318400--Sobic006G066600 Sobic004G196800 Sobic004G196800 Sobic004G318400--Sobic004G196800 Sobic009G025100 Sobic009G025100 Sobic004G318400--Sobic009G025100 Sobic004G155300 Sobic004G155300 Sobic004G318400--Sobic004G155300 Sobic007G194100 Sobic007G194100 Sobic004G318400--Sobic007G194100 Sobic004G102900--Sobic004G318400 Sobic004G102900--Sobic007G208200 Sobic001G050900 Sobic001G050900 Sobic004G102900--Sobic001G050900 Sobic001G154400 Sobic001G154400 Sobic004G102900--Sobic001G154400 Sobic004G102900--Sobic006G066600 Sobic002G240700 Sobic002G240700 Sobic004G102900--Sobic002G240700 Sobic004G102900--Sobic003G304500 Sobic004G102900--Sobic007G194100 Sobic002G113500 Sobic002G113500 Sobic004G102900--Sobic002G113500 Sobic003G324300 Sobic003G324300 Sobic007G208200--Sobic003G324300 Sobic007G208200--Sobic004G318400 Sobic007G208200--Sobic004G102900 Sobic007G208200--Sobic007G194100 Sobic009G199300 Sobic009G199300 Sobic007G208200--Sobic009G199300 Sobic007G150700 Sobic007G150700 Sobic007G208200--Sobic007G150700 Sobic007G208200--Sobic003G304500 Sobic007G182500 Sobic007G182500 Sobic007G208200--Sobic007G182500 Sobic005G064200 Sobic005G064200 Sobic007G208200--Sobic005G064200 Sobic003G304500--Sobic009G025100 Sobic009G033500 Sobic009G033500 Sobic003G304500--Sobic009G033500 Sobic001G170500 Sobic001G170500 Sobic003G304500--Sobic001G170500 Sobic003G304500--Sobic004G274500 Sobic003G304500--Sobic004G196800 Sobic003G304500--Sobic004G155300 Sobic003G304500--Sobic004G318400 Sobic010G037200 Sobic010G037200 Sobic003G304500--Sobic010G037200 Sobic007G091200 Sobic007G091200 Sobic003G304500--Sobic007G091200 Sobic004G274500--Sobic010G037200 Sobic004G274500--Sobic009G025100 Sobic001G394900 Sobic001G394900 Sobic004G274500--Sobic001G394900 Sobic003G402100 Sobic003G402100 Sobic004G274500--Sobic003G402100 Sobic004G274500--Sobic001G170500 Sobic004G274500--Sobic003G304500 Sobic008G039700 Sobic008G039700 Sobic004G274500--Sobic008G039700 Sobic003G303500 Sobic003G303500 Sobic004G274500--Sobic003G303500 Sobic008G037100 Sobic008G037100 Sobic004G274500--Sobic008G037100 Sobic006G066600--Sobic004G318400 Sobic004G067900 Sobic004G067900 Sobic006G066600--Sobic004G067900 Sobic006G066600--Sobic004G102900 Sobic006G244500 Sobic006G244500 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic004G028800 Sobic004G028800 Sobic006G066600--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic006G066600--Sobic001G488200 Sobic006G066600--Sobic004G155300 Sobic002G308400 Sobic002G308400 Sobic006G066600--Sobic002G308400 Sobic004G196800--Sobic009G025100 Sobic004G210000 Sobic004G210000 Sobic004G196800--Sobic004G210000 Sobic006G015800 Sobic006G015800 Sobic004G196800--Sobic006G015800 Sobic010G207400 Sobic010G207400 Sobic004G196800--Sobic010G207400 Sobic010G047300 Sobic010G047300 Sobic004G196800--Sobic010G047300 Sobic005G077900 Sobic005G077900 Sobic004G196800--Sobic005G077900 Sobic002G293100 Sobic002G293100 Sobic004G196800--Sobic002G293100 Sobic004G038900 Sobic004G038900 Sobic004G196800--Sobic004G038900 Sobic004G196800--Sobic009G033500 Sobic009G025100--Sobic001G170500 Sobic009G025100--Sobic008G039700 Sobic009G025100--Sobic010G037200 Sobic010G168500 Sobic010G168500 Sobic009G025100--Sobic010G168500 Sobic008G081700 Sobic008G081700 Sobic009G025100--Sobic008G081700 Sobic009G071600 Sobic009G071600 Sobic009G025100--Sobic009G071600 Sobic010G227400 Sobic010G227400 Sobic009G025100--Sobic010G227400 Sobic008G088450 Sobic008G088450 Sobic009G025100--Sobic008G088450 Sobic002G338600 Sobic002G338600 Sobic009G025100--Sobic002G338600 Sobic004G155300--Sobic003G304500 Sobic004G155300--Sobic009G025100 Sobic004G155300--Sobic004G028800 Sobic004G155300--Sobic004G318400 Sobic004G155300--Sobic004G274500 Sobic004G155300--Sobic006G244500 Sobic004G155300--Sobic001G170500 Sobic004G155300--Sobic004G196800 Sobic004G155300--Sobic007G018000 Sobic007G194100--Sobic002G240700 Sobic007G194100--Sobic010G037200 Sobic007G194100--Sobic009G199300 Sobic007G194100--Sobic002G308400 Sobic005G098700 Sobic005G098700 Sobic007G194100--Sobic005G098700 Sobic007G194100--Sobic009G025100 Sobic007G194100--Sobic004G067900 Sobic007G194100--Sobic007G208200 Sobic001G442200 Sobic001G442200 Sobic007G194100--Sobic001G442200
Octagon: transcription factors


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