Gene annotation
Transcriptome id Sobic.004G067900.1
Synonym Sb04g005690
Functional annotation expressed protein
UniProt C5XWX5
Pfam -
Panther DB PTHR31414 PTHR31414:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G12400 : -
RAP-DB (Rice) LOC_Os02g09080.1 : expressed protein
MaizeGDB (Corn) Zm00025a042061 , Zm00025a019293
Brachypodium KQJ84920 , KQJ93701
Barley -
Wheat TraesCS6A02G145100 , TraesCS6B02G173300 , TraesCS6D02G134100
Populus -


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cDNA sequences
Sobic.004G067900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.006G244500 nuclease PA3, putative, expressed -
3 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
4 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
5 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
6 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
7 Sobic.002G240800 - -
8 Sobic.007G034600 U box protein 8, putative, expressed -
9 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
10 Sobic.003G000500 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
11 Sobic.007G018000 expansin precursor, putative, expressed -
12 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.010G212000 haemolysin-III, putative, expressed K07297: adiponectin receptor
14 Sobic.003G437300 sulfotransferase domain containing protein, expressed -
15 Sobic.002G240700 OsSub58 - Putative Subtilisin homologue, expressed -
16 Sobic.004G318400 MTD1, putative, expressed -
17 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
18 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
20 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic004G067900 Sobic004G067900 Sobic002G308400 Sobic002G308400 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic007G194100 Sobic007G194100 Sobic004G067900--Sobic007G194100 Sobic003G062200 Sobic003G062200 Sobic004G067900--Sobic003G062200 Sobic003G295000 Sobic003G295000 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic001G106400 Sobic001G106400 Sobic004G067900--Sobic001G106400 Sobic002G308400--Sobic004G067900 Sobic002G308400--Sobic007G194100 Sobic002G308400--Sobic006G244500 Sobic002G308400--Sobic001G106400 Sobic002G308400--Sobic003G295000 Sobic002G240700 Sobic002G240700 Sobic002G308400--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic002G308400--Sobic010G037200 Sobic001G442200 Sobic001G442200 Sobic002G308400--Sobic001G442200 Sobic002G308400--Sobic006G066600 Sobic009G009800 Sobic009G009800 Sobic006G244500--Sobic009G009800 Sobic006G244500--Sobic003G062200 Sobic003G376000 Sobic003G376000 Sobic006G244500--Sobic003G376000 Sobic005G158901 Sobic005G158901 Sobic006G244500--Sobic005G158901 Sobic006G151001 Sobic006G151001 Sobic006G244500--Sobic006G151001 Sobic008G037000 Sobic008G037000 Sobic006G244500--Sobic008G037000 Sobic006G096200 Sobic006G096200 Sobic006G244500--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic006G244500--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic006G244500--Sobic001G277800 Sobic007G194100--Sobic002G240700 Sobic007G194100--Sobic010G037200 Sobic009G199300 Sobic009G199300 Sobic007G194100--Sobic009G199300 Sobic007G194100--Sobic002G308400 Sobic005G098700 Sobic005G098700 Sobic007G194100--Sobic005G098700 Sobic009G025100 Sobic009G025100 Sobic007G194100--Sobic009G025100 Sobic007G194100--Sobic004G067900 Sobic007G208200 Sobic007G208200 Sobic007G194100--Sobic007G208200 Sobic007G194100--Sobic001G442200 Sobic003G062200--Sobic006G244500 Sobic003G062200--Sobic009G009800 Sobic003G062200--Sobic003G376000 Sobic003G062200--Sobic008G037000 Sobic003G062200--Sobic006G151001 Sobic003G062200--Sobic006G096200 Sobic003G062200--Sobic010G031600 Sobic010G136300 Sobic010G136300 Sobic003G062200--Sobic010G136300 Sobic009G041100 Sobic009G041100 Sobic003G062200--Sobic009G041100 Sobic001G488000 Sobic001G488000 Sobic003G295000--Sobic001G488000 Sobic003G295000--Sobic009G199300 Sobic003G295000--Sobic004G067900 Sobic003G295000--Sobic003G062200 Sobic001G050900 Sobic001G050900 Sobic003G295000--Sobic001G050900 Sobic003G295000--Sobic002G308400 Sobic010G212000 Sobic010G212000 Sobic003G295000--Sobic010G212000 Sobic003G295000--Sobic007G194100 Sobic010G196800 Sobic010G196800 Sobic003G295000--Sobic010G196800 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic006G066600--Sobic004G067900 Sobic004G102900 Sobic004G102900 Sobic006G066600--Sobic004G102900 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic004G028800 Sobic004G028800 Sobic006G066600--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic006G066600--Sobic001G488200 Sobic004G155300 Sobic004G155300 Sobic006G066600--Sobic004G155300 Sobic006G066600--Sobic002G308400 Sobic003G421900 Sobic003G421900 Sobic002G240800--Sobic003G421900 Sobic002G240800--Sobic004G067900 Sobic002G240800--Sobic003G062200 Sobic001G368900 Sobic001G368900 Sobic002G240800--Sobic001G368900 Sobic002G240800--Sobic006G244500 Sobic006G133000 Sobic006G133000 Sobic002G240800--Sobic006G133000 Sobic002G240800--Sobic006G096200 Sobic007G182500 Sobic007G182500 Sobic002G240800--Sobic007G182500 Sobic002G240800--Sobic006G151001 Sobic007G034600--Sobic004G067900 Sobic006G096300 Sobic006G096300 Sobic007G034600--Sobic006G096300 Sobic007G034600--Sobic004G028800 Sobic007G034600--Sobic002G308400 Sobic009G149800 Sobic009G149800 Sobic007G034600--Sobic009G149800 Sobic007G034600--Sobic002G240800 Sobic007G034600--Sobic001G106400 Sobic003G067700 Sobic003G067700 Sobic007G034600--Sobic003G067700 Sobic009G170800 Sobic009G170800 Sobic007G034600--Sobic009G170800 Sobic001G106400--Sobic004G067900 Sobic001G106400--Sobic002G308400 Sobic001G106400--Sobic006G096300 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200
Octagon: transcription factors


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