Gene annotation
Transcriptome id Sobic.003G295000.1
Synonym
Functional annotation DUF584 domain containing protein, putative, expressed
UniProt A0A1B6Q624
Pfam PF04520
Panther DB PTHR33083
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29640 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os01g54450.1 : DUF584 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053529 , Zm00025a027573
Brachypodium KQJ97135
Barley HORVU1Hr1G041890.1 , HORVU1Hr1G076310.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G295000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.004G067900 expressed protein -
4 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
5 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
6 Sobic.002G308400 "MYB transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659858)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.010G212000 haemolysin-III, putative, expressed K07297: adiponectin receptor
8 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
9 Sobic.010G196800 OsFBX436 - F-box domain containing protein, expressed -
10 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
11 Sobic.006G244500 nuclease PA3, putative, expressed -
12 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
13 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -
14 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
15 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
16 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G208200 expressed protein -
18 Sobic.003G000500 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
19 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.007G034600 U box protein 8, putative, expressed -


Gene co-expression network
sample Sobic003G295000 Sobic003G295000 Sobic001G488000 Sobic001G488000 Sobic003G295000--Sobic001G488000 Sobic009G199300 Sobic009G199300 Sobic003G295000--Sobic009G199300 Sobic004G067900 Sobic004G067900 Sobic003G295000--Sobic004G067900 Sobic003G062200 Sobic003G062200 Sobic003G295000--Sobic003G062200 Sobic001G050900 Sobic001G050900 Sobic003G295000--Sobic001G050900 Sobic002G308400 Sobic002G308400 Sobic003G295000--Sobic002G308400 Sobic010G212000 Sobic010G212000 Sobic003G295000--Sobic010G212000 Sobic007G194100 Sobic007G194100 Sobic003G295000--Sobic007G194100 Sobic010G196800 Sobic010G196800 Sobic003G295000--Sobic010G196800 Sobic001G488000--Sobic003G295000 Sobic007G074200 Sobic007G074200 Sobic001G488000--Sobic007G074200 Sobic002G393600 Sobic002G393600 Sobic001G488000--Sobic002G393600 Sobic009G205100 Sobic009G205100 Sobic001G488000--Sobic009G205100 Sobic001G447100 Sobic001G447100 Sobic001G488000--Sobic001G447100 Sobic003G067700 Sobic003G067700 Sobic001G488000--Sobic003G067700 Sobic002G338250 Sobic002G338250 Sobic001G488000--Sobic002G338250 Sobic008G111500 Sobic008G111500 Sobic001G488000--Sobic008G111500 Sobic009G131400 Sobic009G131400 Sobic001G488000--Sobic009G131400 Sobic009G199300--Sobic007G194100 Sobic010G209300 Sobic010G209300 Sobic009G199300--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic009G199300--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic009G199300--Sobic007G123000 Sobic007G147300 Sobic007G147300 Sobic009G199300--Sobic007G147300 Sobic009G021300 Sobic009G021300 Sobic009G199300--Sobic009G021300 Sobic002G408700 Sobic002G408700 Sobic009G199300--Sobic002G408700 Sobic005G075000 Sobic005G075000 Sobic009G199300--Sobic005G075000 Sobic005G001500 Sobic005G001500 Sobic009G199300--Sobic005G001500 Sobic004G067900--Sobic002G308400 Sobic006G244500 Sobic006G244500 Sobic004G067900--Sobic006G244500 Sobic004G067900--Sobic007G194100 Sobic004G067900--Sobic003G062200 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic001G106400 Sobic001G106400 Sobic004G067900--Sobic001G106400 Sobic003G062200--Sobic006G244500 Sobic009G009800 Sobic009G009800 Sobic003G062200--Sobic009G009800 Sobic003G376000 Sobic003G376000 Sobic003G062200--Sobic003G376000 Sobic008G037000 Sobic008G037000 Sobic003G062200--Sobic008G037000 Sobic006G151001 Sobic006G151001 Sobic003G062200--Sobic006G151001 Sobic006G096200 Sobic006G096200 Sobic003G062200--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic003G062200--Sobic010G031600 Sobic010G136300 Sobic010G136300 Sobic003G062200--Sobic010G136300 Sobic009G041100 Sobic009G041100 Sobic003G062200--Sobic009G041100 Sobic004G102900 Sobic004G102900 Sobic001G050900--Sobic004G102900 Sobic001G050900--Sobic010G196800 Sobic005G064200 Sobic005G064200 Sobic001G050900--Sobic005G064200 Sobic007G208200 Sobic007G208200 Sobic001G050900--Sobic007G208200 Sobic001G050900--Sobic003G295000 Sobic005G098700 Sobic005G098700 Sobic001G050900--Sobic005G098700 Sobic001G050900--Sobic009G199300 Sobic001G050900--Sobic007G194100 Sobic004G318400 Sobic004G318400 Sobic001G050900--Sobic004G318400 Sobic002G308400--Sobic004G067900 Sobic002G308400--Sobic007G194100 Sobic002G308400--Sobic006G244500 Sobic002G308400--Sobic001G106400 Sobic002G308400--Sobic003G295000 Sobic002G240700 Sobic002G240700 Sobic002G308400--Sobic002G240700 Sobic010G037200 Sobic010G037200 Sobic002G308400--Sobic010G037200 Sobic001G442200 Sobic001G442200 Sobic002G308400--Sobic001G442200 Sobic002G308400--Sobic006G066600 Sobic010G212000--Sobic003G062200 Sobic010G212000--Sobic004G067900 Sobic010G212000--Sobic006G244500 Sobic010G212000--Sobic009G009800 Sobic010G212000--Sobic003G376000 Sobic010G212000--Sobic010G037200 Sobic006G028000 Sobic006G028000 Sobic010G212000--Sobic006G028000 Sobic010G078200 Sobic010G078200 Sobic010G212000--Sobic010G078200 Sobic010G212000--Sobic009G199300 Sobic007G194100--Sobic002G240700 Sobic007G194100--Sobic010G037200 Sobic007G194100--Sobic009G199300 Sobic007G194100--Sobic002G308400 Sobic007G194100--Sobic005G098700 Sobic009G025100 Sobic009G025100 Sobic007G194100--Sobic009G025100 Sobic007G194100--Sobic004G067900 Sobic007G194100--Sobic007G208200 Sobic007G194100--Sobic001G442200 Sobic003G325700 Sobic003G325700 Sobic010G196800--Sobic003G325700 Sobic010G196800--Sobic009G131400 Sobic010G196800--Sobic001G050900 Sobic003G146400 Sobic003G146400 Sobic010G196800--Sobic003G146400 Sobic010G196800--Sobic005G064200 Sobic010G196800--Sobic008G111500 Sobic009G216800 Sobic009G216800 Sobic010G196800--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic010G196800--Sobic009G170800 Sobic001G389900 Sobic001G389900 Sobic010G196800--Sobic001G389900
Octagon: transcription factors


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