Gene annotation
Transcriptome id Sobic.010G212000.1
Synonym HHP2, Sb10g025870
Functional annotation haemolysin-III, putative, expressed
UniProt C5Z754
Pfam PF03006
Panther DB PTHR20855 PTHR20855:SF55
NCBI CDD KOG0748; Predicted membrane proteins, contain hemolysin III domain
KEGG Orthology K07297; adiponectin receptor
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G30850 : heptahelical transmembrane protein2
RAP-DB (Rice) LOC_Os06g44250.1 : haemolysin-III, putative, expressed
MaizeGDB (Corn) Zm00025a034735 , Zm00025a051633 , Zm00025a019206
Brachypodium KQJ93641 , KQK16851
Barley HORVU6Hr1G029640.16 , HORVU6Hr1G029640.15 , HORVU6Hr1G029640.14 , HORVU6Hr1G029640.13 , HORVU6Hr1G029640.12 , HORVU6Hr1G029640.11 , HORVU6Hr1G029640.10 , HORVU6Hr1G029640.9 , HORVU6Hr1G029640.8 , HORVU6Hr1G029640.7 , HORVU6Hr1G029640.6 , HORVU6Hr1G029640.5 , HORVU6Hr1G029640.4 , HORVU6Hr1G029640.3 , HORVU6Hr1G029640.2 , HORVU6Hr1G029640.1 , HORVU7Hr1G112900.8 , HORVU7Hr1G112900.9 , HORVU7Hr1G112900.4 , HORVU7Hr1G112900.5 , HORVU7Hr1G112900.6 , HORVU7Hr1G112900.7 , HORVU7Hr1G112900.1 , HORVU7Hr1G112900.2 , HORVU7Hr1G112900.3
Wheat TraesCS6A02G149300 , TraesCS7A02G502900 , TraesCS7D02G490300 , TraesCS6D02G138600 , TraesCS7B02G410300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G212000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
2 Sobic.004G067900 expressed protein -
3 Sobic.006G244500 nuclease PA3, putative, expressed -
4 Sobic.009G009800 expressed protein -
5 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
6 Sobic.010G037200 SAM dependent carboxyl methyltransferase, putative, expressed -
7 Sobic.006G028000 amidase, putative, expressed K01426: E3.5.1.4, amidase
8 Sobic.010G078200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G199300 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.007G194100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
11 Sobic.005G227500 - -
12 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
13 Sobic.009G025100 transporter, putative, expressed -
14 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.001G277800 transferase family protein, putative, expressed -
16 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
17 Sobic.004G254400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
18 Sobic.008G039700 expressed protein -
19 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
20 Sobic.003G421900 glycosyl hydrolases family 17, putative, expressed -


Gene co-expression network
sample Sobic010G212000 Sobic010G212000 Sobic003G062200 Sobic003G062200 Sobic010G212000--Sobic003G062200 Sobic004G067900 Sobic004G067900 Sobic010G212000--Sobic004G067900 Sobic006G244500 Sobic006G244500 Sobic010G212000--Sobic006G244500 Sobic009G009800 Sobic009G009800 Sobic010G212000--Sobic009G009800 Sobic003G376000 Sobic003G376000 Sobic010G212000--Sobic003G376000 Sobic010G037200 Sobic010G037200 Sobic010G212000--Sobic010G037200 Sobic006G028000 Sobic006G028000 Sobic010G212000--Sobic006G028000 Sobic010G078200 Sobic010G078200 Sobic010G212000--Sobic010G078200 Sobic009G199300 Sobic009G199300 Sobic010G212000--Sobic009G199300 Sobic003G062200--Sobic006G244500 Sobic003G062200--Sobic009G009800 Sobic003G062200--Sobic003G376000 Sobic008G037000 Sobic008G037000 Sobic003G062200--Sobic008G037000 Sobic006G151001 Sobic006G151001 Sobic003G062200--Sobic006G151001 Sobic006G096200 Sobic006G096200 Sobic003G062200--Sobic006G096200 Sobic010G031600 Sobic010G031600 Sobic003G062200--Sobic010G031600 Sobic010G136300 Sobic010G136300 Sobic003G062200--Sobic010G136300 Sobic009G041100 Sobic009G041100 Sobic003G062200--Sobic009G041100 Sobic002G308400 Sobic002G308400 Sobic004G067900--Sobic002G308400 Sobic004G067900--Sobic006G244500 Sobic007G194100 Sobic007G194100 Sobic004G067900--Sobic007G194100 Sobic004G067900--Sobic003G062200 Sobic003G295000 Sobic003G295000 Sobic004G067900--Sobic003G295000 Sobic006G066600 Sobic006G066600 Sobic004G067900--Sobic006G066600 Sobic002G240800 Sobic002G240800 Sobic004G067900--Sobic002G240800 Sobic007G034600 Sobic007G034600 Sobic004G067900--Sobic007G034600 Sobic001G106400 Sobic001G106400 Sobic004G067900--Sobic001G106400 Sobic006G244500--Sobic009G009800 Sobic006G244500--Sobic003G062200 Sobic006G244500--Sobic003G376000 Sobic005G158901 Sobic005G158901 Sobic006G244500--Sobic005G158901 Sobic006G244500--Sobic006G151001 Sobic006G244500--Sobic008G037000 Sobic006G244500--Sobic006G096200 Sobic006G244500--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic006G244500--Sobic001G277800 Sobic009G009800--Sobic006G244500 Sobic009G009800--Sobic010G031600 Sobic009G009800--Sobic003G376000 Sobic009G009800--Sobic001G277800 Sobic009G009800--Sobic010G136300 Sobic009G009800--Sobic005G158901 Sobic009G009800--Sobic008G037000 Sobic007G049400 Sobic007G049400 Sobic009G009800--Sobic007G049400 Sobic005G112066 Sobic005G112066 Sobic009G009800--Sobic005G112066 Sobic003G376000--Sobic010G136300 Sobic003G376000--Sobic010G031600 Sobic003G376000--Sobic001G277800 Sobic003G376000--Sobic009G009800 Sobic003G376000--Sobic006G096200 Sobic002G077500 Sobic002G077500 Sobic003G376000--Sobic002G077500 Sobic003G376000--Sobic005G112066 Sobic001G326000 Sobic001G326000 Sobic003G376000--Sobic001G326000 Sobic003G376000--Sobic007G049400 Sobic009G025100 Sobic009G025100 Sobic010G037200--Sobic009G025100 Sobic008G039700 Sobic008G039700 Sobic010G037200--Sobic008G039700 Sobic010G227400 Sobic010G227400 Sobic010G037200--Sobic010G227400 Sobic010G085700 Sobic010G085700 Sobic010G037200--Sobic010G085700 Sobic009G040000 Sobic009G040000 Sobic010G037200--Sobic009G040000 Sobic001G068200 Sobic001G068200 Sobic010G037200--Sobic001G068200 Sobic001G253400 Sobic001G253400 Sobic010G037200--Sobic001G253400 Sobic001G158600 Sobic001G158600 Sobic010G037200--Sobic001G158600 Sobic006G051750 Sobic006G051750 Sobic010G037200--Sobic006G051750 Sobic007G205100 Sobic007G205100 Sobic006G028000--Sobic007G205100 Sobic002G338600 Sobic002G338600 Sobic006G028000--Sobic002G338600 Sobic010G200200 Sobic010G200200 Sobic006G028000--Sobic010G200200 Sobic010G200400 Sobic010G200400 Sobic006G028000--Sobic010G200400 Sobic006G028000--Sobic008G039700 Sobic001G259250 Sobic001G259250 Sobic006G028000--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic006G028000--Sobic005G153200 Sobic002G028100 Sobic002G028100 Sobic006G028000--Sobic002G028100 Sobic004G142000 Sobic004G142000 Sobic006G028000--Sobic004G142000 Sobic007G070700 Sobic007G070700 Sobic010G078200--Sobic007G070700 Sobic007G083300 Sobic007G083300 Sobic010G078200--Sobic007G083300 Sobic010G078200--Sobic007G049400 Sobic010G078200--Sobic001G277800 Sobic005G140400 Sobic005G140400 Sobic010G078200--Sobic005G140400 Sobic003G247700 Sobic003G247700 Sobic010G078200--Sobic003G247700 Sobic010G078200--Sobic002G077500 Sobic001G253501 Sobic001G253501 Sobic010G078200--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic010G078200--Sobic009G245750 Sobic009G199300--Sobic007G194100 Sobic010G209300 Sobic010G209300 Sobic009G199300--Sobic010G209300 Sobic007G122932 Sobic007G122932 Sobic009G199300--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic009G199300--Sobic007G123000 Sobic007G147300 Sobic007G147300 Sobic009G199300--Sobic007G147300 Sobic009G021300 Sobic009G021300 Sobic009G199300--Sobic009G021300 Sobic002G408700 Sobic002G408700 Sobic009G199300--Sobic002G408700 Sobic005G075000 Sobic005G075000 Sobic009G199300--Sobic005G075000 Sobic005G001500 Sobic005G001500 Sobic009G199300--Sobic005G001500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.