Gene annotation
Transcriptome id Sobic.003G376000.1
Synonym ATAAP8, Sb03g041590, AAP8
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
amino acid transporter, putative, expressed
UniProt A0A1B6Q7B4
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF274
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10010 : amino acid permease 8
RAP-DB (Rice) LOC_Os01g65670.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a039510
Brachypodium KQK10875
Barley HORVU3Hr1G081570.6 , HORVU3Hr1G081570.7 , HORVU3Hr1G081570.4 , HORVU3Hr1G081570.5 , HORVU3Hr1G081570.2 , HORVU3Hr1G081570.3 , HORVU3Hr1G081570.1 , HORVU3Hr1G081570.8 , HORVU3Hr1G081570.9 , HORVU3Hr1G081570.10 , HORVU3Hr1G081570.11
Wheat TraesCS3B02G420700 , TraesCS3D02G381500 , TraesCS3A02G388000
Populus -


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cDNA sequences
Sobic.003G376000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
2 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
3 Sobic.001G277800 transferase family protein, putative, expressed -
4 Sobic.009G009800 expressed protein -
5 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.002G077500 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.005G112066 - -
8 Sobic.001G326000 expressed protein -
9 Sobic.007G049400 OsFBX381 - F-box domain containing protein, expressed -
10 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
11 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
12 Sobic.008G037000 Ser/Thr protein phosphatase family protein, putative, expressed -
13 Sobic.004G254400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
14 Sobic.003G105600 no apical meristem protein, putative, expressed -
15 Sobic.010G095300 - -
16 Sobic.002G091800 peptide transporter PTR2, putative, expressed -
17 Sobic.006G031600 expressed protein -
18 Sobic.005G140400 - -
19 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
20 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G376000 Sobic003G376000 Sobic010G136300 Sobic010G136300 Sobic003G376000--Sobic010G136300 Sobic010G031600 Sobic010G031600 Sobic003G376000--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic003G376000--Sobic001G277800 Sobic009G009800 Sobic009G009800 Sobic003G376000--Sobic009G009800 Sobic006G096200 Sobic006G096200 Sobic003G376000--Sobic006G096200 Sobic002G077500 Sobic002G077500 Sobic003G376000--Sobic002G077500 Sobic005G112066 Sobic005G112066 Sobic003G376000--Sobic005G112066 Sobic001G326000 Sobic001G326000 Sobic003G376000--Sobic001G326000 Sobic007G049400 Sobic007G049400 Sobic003G376000--Sobic007G049400 Sobic010G136300--Sobic001G326000 Sobic007G156300 Sobic007G156300 Sobic010G136300--Sobic007G156300 Sobic006G031600 Sobic006G031600 Sobic010G136300--Sobic006G031600 Sobic004G313800 Sobic004G313800 Sobic010G136300--Sobic004G313800 Sobic005G223200 Sobic005G223200 Sobic010G136300--Sobic005G223200 Sobic010G136300--Sobic002G077500 Sobic003G105600 Sobic003G105600 Sobic010G136300--Sobic003G105600 Sobic010G136300--Sobic005G112066 Sobic009G009900 Sobic009G009900 Sobic010G136300--Sobic009G009900 Sobic010G031600--Sobic001G277800 Sobic009G186400 Sobic009G186400 Sobic010G031600--Sobic009G186400 Sobic007G083300 Sobic007G083300 Sobic010G031600--Sobic007G083300 Sobic010G031600--Sobic002G077500 SobicK043500 SobicK043500 Sobic010G031600--SobicK043500 Sobic007G070700 Sobic007G070700 Sobic010G031600--Sobic007G070700 Sobic010G031600--Sobic003G105600 Sobic010G031600--Sobic007G049400 Sobic002G077600 Sobic002G077600 Sobic010G031600--Sobic002G077600 Sobic001G277800--Sobic010G031600 Sobic001G277800--Sobic007G049400 Sobic001G277800--Sobic007G083300 Sobic001G277800--Sobic007G070700 Sobic001G277800--SobicK043500 Sobic001G277800--Sobic002G077500 Sobic001G277800--Sobic002G077600 Sobic005G140400 Sobic005G140400 Sobic001G277800--Sobic005G140400 Sobic001G277800--Sobic009G186400 Sobic006G244500 Sobic006G244500 Sobic009G009800--Sobic006G244500 Sobic009G009800--Sobic010G031600 Sobic009G009800--Sobic003G376000 Sobic009G009800--Sobic001G277800 Sobic009G009800--Sobic010G136300 Sobic005G158901 Sobic005G158901 Sobic009G009800--Sobic005G158901 Sobic008G037000 Sobic008G037000 Sobic009G009800--Sobic008G037000 Sobic009G009800--Sobic007G049400 Sobic009G009800--Sobic005G112066 Sobic006G096200--Sobic010G136300 Sobic003G438700 Sobic003G438700 Sobic006G096200--Sobic003G438700 Sobic008G013100 Sobic008G013100 Sobic006G096200--Sobic008G013100 Sobic006G096200--Sobic004G313800 Sobic006G096200--Sobic003G105600 Sobic006G154300 Sobic006G154300 Sobic006G096200--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic006G096200--Sobic006G059900 Sobic009G010150 Sobic009G010150 Sobic006G096200--Sobic009G010150 Sobic006G096200--Sobic010G031600 Sobic002G077500--Sobic009G186400 Sobic002G077500--Sobic005G112066 Sobic002G077500--Sobic001G326000 Sobic002G077500--Sobic007G049400 Sobic002G077500--Sobic003G105600 Sobic002G077500--Sobic007G083300 Sobic002G077500--SobicK043500 Sobic002G077500--Sobic005G140400 Sobic002G077500--Sobic007G070700 Sobic005G112066--Sobic002G077500 Sobic005G112066--Sobic007G049400 Sobic005G112066--Sobic001G326000 Sobic005G112066--Sobic005G140400 Sobic002G091800 Sobic002G091800 Sobic005G112066--Sobic002G091800 Sobic005G112066--Sobic009G186400 Sobic005G112066--Sobic007G156300 Sobic002G344900 Sobic002G344900 Sobic005G112066--Sobic002G344900 Sobic005G112066--Sobic006G031600 Sobic001G326000--Sobic002G077500 Sobic001G326000--Sobic007G156300 Sobic001G326000--Sobic005G112066 Sobic001G326000--Sobic009G186400 Sobic001G326000--Sobic003G105600 Sobic001G326000--Sobic006G031600 Sobic001G326000--Sobic004G313800 Sobic001G326000--Sobic005G223200 Sobic001G326000--Sobic002G344900 Sobic007G049400--Sobic005G112066 Sobic007G049400--Sobic002G077500 Sobic007G049400--Sobic002G077600 Sobic001G253501 Sobic001G253501 Sobic007G049400--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic007G049400--Sobic009G245750 Sobic007G049400--Sobic005G140400 Sobic007G049400--Sobic007G070700 Sobic007G049400--Sobic007G083300 Sobic001G112250 Sobic001G112250 Sobic007G049400--Sobic001G112250
Octagon: transcription factors


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