Gene annotation
Transcriptome id Sobic.003G421900.1
Synonym Sb03g045480, BG3
Functional annotation glycosyl hydrolases family 17, putative, expressed
UniProt C5XHS0
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF106
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G57270 : beta-1,3-glucanase 1
RAP-DB (Rice) LOC_Os01g71474.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a043498 , Zm00025a039154 , Zm00025a026062 , Zm00025a036936 , Zm00025a043501
Brachypodium KQK06584 , KQK06585 , KQK11484
Barley HORVU1Hr1G057680.5 , HORVU1Hr1G057680.4 , HORVU1Hr1G057680.6 , HORVU1Hr1G057680.1 , HORVU1Hr1G057680.3 , HORVU1Hr1G057680.2 , HORVU7Hr1G051310.3 , HORVU7Hr1G051310.2 , HORVU3Hr1G105290.1 , HORVU3Hr1G105620.1 , HORVU3Hr1G105620.3 , HORVU3Hr1G105620.2 , HORVU3Hr1G105620.5 , HORVU3Hr1G105620.4 , HORVU3Hr1G105620.6 , HORVU3Hr1G105420.3 , HORVU3Hr1G105420.2 , HORVU3Hr1G105420.1
Wheat TraesCS3B02G530000 , TraesCS3B02G525000 , TraesCS3A02G480400 , TraesCS3B02G529100 , TraesCS3D02G477700 , TraesCS3B02G526000 , TraesCS3D02G475200 , TraesCS3A02G483800 , TraesCS3B02G530600
Populus -


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cDNA sequences
Sobic.003G421900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G009800 expressed protein -
2 Sobic.006G244500 nuclease PA3, putative, expressed -
3 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
5 Sobic.001G368900 IQ calmodulin-binding motif family protein, putative, expressed -
6 Sobic.008G037000 Ser/Thr protein phosphatase family protein, putative, expressed -
7 Sobic.001G277800 transferase family protein, putative, expressed -
8 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
9 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
10 Sobic.004G157950 - -
11 Sobic.006G031600 expressed protein -
12 Sobic.009G041100 expressed protein -
13 Sobic.002G143700 alpha-soluble NSF attachment protein, putative, expressed -
14 Sobic.006G151001 - -
15 Sobic.009G231500 expressed protein -
16 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
17 Sobic.003G392500 cytochrome P450, putative, expressed -
18 Sobic.009G009900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inhibitor I family protein, putative, expressed -
19 Sobic.005G112066 - -
20 Sobic.007G084800 expressed protein -


Gene co-expression network
sample Sobic003G421900 Sobic003G421900 Sobic009G009800 Sobic009G009800 Sobic003G421900--Sobic009G009800 Sobic006G244500 Sobic006G244500 Sobic003G421900--Sobic006G244500 Sobic006G096200 Sobic006G096200 Sobic003G421900--Sobic006G096200 Sobic010G136300 Sobic010G136300 Sobic003G421900--Sobic010G136300 Sobic001G368900 Sobic001G368900 Sobic003G421900--Sobic001G368900 Sobic008G037000 Sobic008G037000 Sobic003G421900--Sobic008G037000 Sobic001G277800 Sobic001G277800 Sobic003G421900--Sobic001G277800 Sobic010G031600 Sobic010G031600 Sobic003G421900--Sobic010G031600 Sobic003G376000 Sobic003G376000 Sobic003G421900--Sobic003G376000 Sobic009G009800--Sobic006G244500 Sobic009G009800--Sobic010G031600 Sobic009G009800--Sobic003G376000 Sobic009G009800--Sobic001G277800 Sobic009G009800--Sobic010G136300 Sobic005G158901 Sobic005G158901 Sobic009G009800--Sobic005G158901 Sobic009G009800--Sobic008G037000 Sobic007G049400 Sobic007G049400 Sobic009G009800--Sobic007G049400 Sobic005G112066 Sobic005G112066 Sobic009G009800--Sobic005G112066 Sobic006G244500--Sobic009G009800 Sobic003G062200 Sobic003G062200 Sobic006G244500--Sobic003G062200 Sobic006G244500--Sobic003G376000 Sobic006G244500--Sobic005G158901 Sobic006G151001 Sobic006G151001 Sobic006G244500--Sobic006G151001 Sobic006G244500--Sobic008G037000 Sobic006G244500--Sobic006G096200 Sobic006G244500--Sobic010G031600 Sobic006G244500--Sobic001G277800 Sobic006G096200--Sobic010G136300 Sobic003G438700 Sobic003G438700 Sobic006G096200--Sobic003G438700 Sobic008G013100 Sobic008G013100 Sobic006G096200--Sobic008G013100 Sobic004G313800 Sobic004G313800 Sobic006G096200--Sobic004G313800 Sobic003G105600 Sobic003G105600 Sobic006G096200--Sobic003G105600 Sobic006G154300 Sobic006G154300 Sobic006G096200--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic006G096200--Sobic006G059900 Sobic009G010150 Sobic009G010150 Sobic006G096200--Sobic009G010150 Sobic006G096200--Sobic010G031600 Sobic001G326000 Sobic001G326000 Sobic010G136300--Sobic001G326000 Sobic007G156300 Sobic007G156300 Sobic010G136300--Sobic007G156300 Sobic006G031600 Sobic006G031600 Sobic010G136300--Sobic006G031600 Sobic010G136300--Sobic004G313800 Sobic005G223200 Sobic005G223200 Sobic010G136300--Sobic005G223200 Sobic002G077500 Sobic002G077500 Sobic010G136300--Sobic002G077500 Sobic010G136300--Sobic003G105600 Sobic010G136300--Sobic005G112066 Sobic009G009900 Sobic009G009900 Sobic010G136300--Sobic009G009900 Sobic009G227000 Sobic009G227000 Sobic001G368900--Sobic009G227000 Sobic001G368900--Sobic006G096200 Sobic001G368900--Sobic001G277800 Sobic001G368900--Sobic010G031600 Sobic004G254400 Sobic004G254400 Sobic001G368900--Sobic004G254400 Sobic005G003750 Sobic005G003750 Sobic001G368900--Sobic005G003750 Sobic003G350900 Sobic003G350900 Sobic001G368900--Sobic003G350900 Sobic007G083300 Sobic007G083300 Sobic001G368900--Sobic007G083300 SobicK043500 SobicK043500 Sobic001G368900--SobicK043500 Sobic008G037000--Sobic010G136300 Sobic008G037000--Sobic003G376000 Sobic008G037000--Sobic010G031600 Sobic008G037000--Sobic001G277800 Sobic008G037000--Sobic009G009800 Sobic009G041100 Sobic009G041100 Sobic008G037000--Sobic009G041100 Sobic008G037000--Sobic006G096200 Sobic008G037000--Sobic007G156300 Sobic008G037000--Sobic006G031600 Sobic001G277800--Sobic010G031600 Sobic001G277800--Sobic007G049400 Sobic001G277800--Sobic007G083300 Sobic007G070700 Sobic007G070700 Sobic001G277800--Sobic007G070700 Sobic001G277800--SobicK043500 Sobic001G277800--Sobic002G077500 Sobic002G077600 Sobic002G077600 Sobic001G277800--Sobic002G077600 Sobic005G140400 Sobic005G140400 Sobic001G277800--Sobic005G140400 Sobic009G186400 Sobic009G186400 Sobic001G277800--Sobic009G186400 Sobic010G031600--Sobic001G277800 Sobic010G031600--Sobic009G186400 Sobic010G031600--Sobic007G083300 Sobic010G031600--Sobic002G077500 Sobic010G031600--SobicK043500 Sobic010G031600--Sobic007G070700 Sobic010G031600--Sobic003G105600 Sobic010G031600--Sobic007G049400 Sobic010G031600--Sobic002G077600 Sobic003G376000--Sobic010G136300 Sobic003G376000--Sobic010G031600 Sobic003G376000--Sobic001G277800 Sobic003G376000--Sobic009G009800 Sobic003G376000--Sobic006G096200 Sobic003G376000--Sobic002G077500 Sobic003G376000--Sobic005G112066 Sobic003G376000--Sobic001G326000 Sobic003G376000--Sobic007G049400
Octagon: transcription factors


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