Gene annotation
Transcriptome id Sobic.007G084800.1
Synonym Sb07g006955
Functional annotation expressed protein
UniProt A0A1B6PGH7
Pfam -
Panther DB PTHR33320:SF4 PTHR33320
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29905 : -
RAP-DB (Rice) LOC_Os04g51680.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ95692
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G084800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G413850 - -
2 Sobic.005G087666 - K17506: PPM1L, protein phosphatase 1L
3 Sobic.009G009900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inhibitor I family protein, putative, expressed -
4 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
5 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.002G370300 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.003G226000 polygalacturonase, putative, expressed K01184: polygalacturonase
8 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G010000 expressed protein -
10 Sobic.005G199300 expressed protein -
11 Sobic.007G001600 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.010G237100 expressed protein -
13 Sobic.003G392500 cytochrome P450, putative, expressed -
14 Sobic.002G274900 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.003G101100 no apical meristem protein, putative, expressed -
16 Sobic.005G193260 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869) -
17 Sobic.005G192900 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
18 Sobic.005G192700 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic007G084800 Sobic007G084800 Sobic001G413850 Sobic001G413850 Sobic007G084800--Sobic001G413850 Sobic005G087666 Sobic005G087666 Sobic007G084800--Sobic005G087666 Sobic009G009900 Sobic009G009900 Sobic007G084800--Sobic009G009900 Sobic002G362400 Sobic002G362400 Sobic007G084800--Sobic002G362400 Sobic010G044600 Sobic010G044600 Sobic007G084800--Sobic010G044600 Sobic002G370300 Sobic002G370300 Sobic007G084800--Sobic002G370300 Sobic003G226000 Sobic003G226000 Sobic007G084800--Sobic003G226000 Sobic005G110000 Sobic005G110000 Sobic007G084800--Sobic005G110000 Sobic009G010000 Sobic009G010000 Sobic007G084800--Sobic009G010000 Sobic008G186700 Sobic008G186700 Sobic001G413850--Sobic008G186700 Sobic001G413850--Sobic005G110000 Sobic001G413850--Sobic002G362400 Sobic001G413850--Sobic005G087666 Sobic001G413850--Sobic007G084800 Sobic001G381250 Sobic001G381250 Sobic001G413850--Sobic001G381250 Sobic005G087666--Sobic002G362400 Sobic005G087666--Sobic005G110000 Sobic005G087666--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic005G087666--Sobic010G237100 Sobic005G199300 Sobic005G199300 Sobic005G087666--Sobic005G199300 Sobic005G087666--Sobic003G226000 Sobic005G087666--Sobic002G370300 Sobic007G001600 Sobic007G001600 Sobic005G087666--Sobic007G001600 Sobic002G274900 Sobic002G274900 Sobic005G087666--Sobic002G274900 Sobic009G009900--Sobic009G010000 Sobic003G392500 Sobic003G392500 Sobic009G009900--Sobic003G392500 Sobic009G009900--Sobic007G001600 Sobic004G313800 Sobic004G313800 Sobic009G009900--Sobic004G313800 Sobic009G009900--Sobic005G199300 Sobic006G154300 Sobic006G154300 Sobic009G009900--Sobic006G154300 Sobic006G031600 Sobic006G031600 Sobic009G009900--Sobic006G031600 Sobic009G010150 Sobic009G010150 Sobic009G009900--Sobic009G010150 Sobic010G142300 Sobic010G142300 Sobic009G009900--Sobic010G142300 Sobic002G362400--Sobic005G110000 Sobic002G362400--Sobic003G226000 Sobic002G362400--Sobic005G199300 Sobic002G362400--Sobic010G044600 Sobic002G362400--Sobic002G274900 Sobic002G362400--Sobic002G370300 Sobic002G362400--Sobic007G001600 Sobic002G362400--Sobic005G087666 Sobic002G362400--Sobic010G237100 Sobic010G044600--Sobic002G362400 Sobic010G044600--Sobic005G110000 Sobic010G044600--Sobic010G237100 Sobic005G169300 Sobic005G169300 Sobic010G044600--Sobic005G169300 Sobic005G192901 Sobic005G192901 Sobic010G044600--Sobic005G192901 Sobic005G192801 Sobic005G192801 Sobic010G044600--Sobic005G192801 Sobic005G193100 Sobic005G193100 Sobic010G044600--Sobic005G193100 Sobic010G044600--Sobic001G381250 Sobic002G370300--Sobic003G226000 Sobic002G370300--Sobic005G199300 Sobic003G101100 Sobic003G101100 Sobic002G370300--Sobic003G101100 Sobic002G370300--Sobic007G001600 Sobic002G370300--Sobic002G274900 Sobic002G370300--Sobic002G362400 Sobic002G370300--Sobic009G010000 Sobic002G370300--Sobic003G392500 Sobic002G370300--Sobic009G010150 Sobic003G226000--Sobic002G274900 Sobic003G226000--Sobic005G199300 Sobic003G226000--Sobic007G001600 Sobic003G226000--Sobic009G010150 Sobic003G226000--Sobic002G362400 Sobic003G226000--Sobic002G370300 Sobic003G226000--Sobic006G154300 Sobic003G226000--Sobic009G010000 Sobic003G226000--Sobic003G101100 Sobic005G110000--Sobic002G362400 Sobic005G110000--Sobic010G044600 Sobic005G110000--Sobic010G237100 Sobic005G110000--Sobic005G087666 Sobic005G110000--Sobic005G199300 Sobic005G110000--Sobic001G381250 Sobic009G010000--Sobic003G392500 Sobic009G010000--Sobic007G001600 Sobic009G010000--Sobic005G199300 Sobic009G010000--Sobic009G009900 Sobic009G010000--Sobic003G226000 Sobic009G010000--Sobic002G274900 Sobic009G010000--Sobic002G370300 Sobic009G010000--Sobic009G010150 Sobic009G010000--Sobic006G154300
Octagon: transcription factors


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