Gene annotation
Transcriptome id Sobic.006G151001.1
Synonym -
Functional annotation -
UniProt A0A1Z5RE61
Pfam PF05757
Panther DB PTHR33399 PTHR33399:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015979; photosynthesis GO:0009654photosystem II oxygen evolving complex GO:0009523photosystem II GO:0005509calcium ion binding


Orthologs (automatic annotation)
TAIR AT3G01440 : PsbQ-like 1
RAP-DB (Rice) LOC_Os04g44190.1 : expressed protein
MaizeGDB (Corn) Zm00025a056525 , Zm00025a010631
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G041100 expressed protein -
2 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.008G037000 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -
5 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.009G169650 - -
7 Sobic.006G244500 nuclease PA3, putative, expressed -
8 Sobic.009G009800 expressed protein -
9 Sobic.010G044600 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.010G237100 expressed protein -
11 Sobic.005G087666 - K17506: PPM1L, protein phosphatase 1L
12 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
13 Sobic.005G110000 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.009G231500 expressed protein -
15 Sobic.002G362400 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
16 Sobic.005G169300 WIP5 - Wound-induced protein precursor, expressed -
17 Sobic.005G193100 "alpha-kafirin locus, highly digestible high-lysine (hdhl) mutant P721Q"(PubMedID : 23948869)@- -
18 Sobic.001G381250 - -
19 Sobic.001G381250 - -
20 Sobic.001G381250 - -


Gene co-expression network
sample Sobic006G151001 Sobic006G151001 Sobic009G041100 Sobic009G041100 Sobic006G151001--Sobic009G041100 Sobic003G376000 Sobic003G376000 Sobic006G151001--Sobic003G376000 Sobic008G037000 Sobic008G037000 Sobic006G151001--Sobic008G037000 Sobic003G062200 Sobic003G062200 Sobic006G151001--Sobic003G062200 Sobic006G096200 Sobic006G096200 Sobic006G151001--Sobic006G096200 Sobic009G169650 Sobic009G169650 Sobic006G151001--Sobic009G169650 Sobic006G244500 Sobic006G244500 Sobic006G151001--Sobic006G244500 Sobic009G009800 Sobic009G009800 Sobic006G151001--Sobic009G009800 Sobic010G044600 Sobic010G044600 Sobic006G151001--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic009G041100--Sobic010G237100 Sobic009G041100--Sobic010G044600 Sobic001G381250 Sobic001G381250 Sobic009G041100--Sobic001G381250 Sobic010G136300 Sobic010G136300 Sobic003G376000--Sobic010G136300 Sobic010G031600 Sobic010G031600 Sobic003G376000--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic003G376000--Sobic001G277800 Sobic003G376000--Sobic009G009800 Sobic003G376000--Sobic006G096200 Sobic002G077500 Sobic002G077500 Sobic003G376000--Sobic002G077500 Sobic005G112066 Sobic005G112066 Sobic003G376000--Sobic005G112066 Sobic001G326000 Sobic001G326000 Sobic003G376000--Sobic001G326000 Sobic007G049400 Sobic007G049400 Sobic003G376000--Sobic007G049400 Sobic008G037000--Sobic010G136300 Sobic008G037000--Sobic003G376000 Sobic008G037000--Sobic010G031600 Sobic008G037000--Sobic001G277800 Sobic008G037000--Sobic009G009800 Sobic008G037000--Sobic009G041100 Sobic008G037000--Sobic006G096200 Sobic007G156300 Sobic007G156300 Sobic008G037000--Sobic007G156300 Sobic006G031600 Sobic006G031600 Sobic008G037000--Sobic006G031600 Sobic003G062200--Sobic006G244500 Sobic003G062200--Sobic009G009800 Sobic003G062200--Sobic003G376000 Sobic003G062200--Sobic008G037000 Sobic003G062200--Sobic006G151001 Sobic003G062200--Sobic006G096200 Sobic003G062200--Sobic010G031600 Sobic003G062200--Sobic010G136300 Sobic003G062200--Sobic009G041100 Sobic006G096200--Sobic010G136300 Sobic003G438700 Sobic003G438700 Sobic006G096200--Sobic003G438700 Sobic008G013100 Sobic008G013100 Sobic006G096200--Sobic008G013100 Sobic004G313800 Sobic004G313800 Sobic006G096200--Sobic004G313800 Sobic003G105600 Sobic003G105600 Sobic006G096200--Sobic003G105600 Sobic006G154300 Sobic006G154300 Sobic006G096200--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic006G096200--Sobic006G059900 Sobic009G010150 Sobic009G010150 Sobic006G096200--Sobic009G010150 Sobic006G096200--Sobic010G031600 Sobic009G169650--Sobic001G381250 Sobic006G244500--Sobic009G009800 Sobic006G244500--Sobic003G062200 Sobic006G244500--Sobic003G376000 Sobic005G158901 Sobic005G158901 Sobic006G244500--Sobic005G158901 Sobic006G244500--Sobic006G151001 Sobic006G244500--Sobic008G037000 Sobic006G244500--Sobic006G096200 Sobic006G244500--Sobic010G031600 Sobic006G244500--Sobic001G277800 Sobic009G009800--Sobic006G244500 Sobic009G009800--Sobic010G031600 Sobic009G009800--Sobic003G376000 Sobic009G009800--Sobic001G277800 Sobic009G009800--Sobic010G136300 Sobic009G009800--Sobic005G158901 Sobic009G009800--Sobic008G037000 Sobic009G009800--Sobic007G049400 Sobic009G009800--Sobic005G112066 Sobic002G362400 Sobic002G362400 Sobic010G044600--Sobic002G362400 Sobic005G110000 Sobic005G110000 Sobic010G044600--Sobic005G110000 Sobic010G044600--Sobic010G237100 Sobic005G169300 Sobic005G169300 Sobic010G044600--Sobic005G169300 Sobic005G192901 Sobic005G192901 Sobic010G044600--Sobic005G192901 Sobic005G192801 Sobic005G192801 Sobic010G044600--Sobic005G192801 Sobic005G193100 Sobic005G193100 Sobic010G044600--Sobic005G193100 Sobic010G044600--Sobic001G381250
Octagon: transcription factors


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