Gene annotation
Transcriptome id Sobic.001G368900.1,Sobic.001G368900.3,Sobic.001G368900.2,Sobic.001G368900.4
Synonym Sb01g035120, IQD11
Functional annotation IQ calmodulin-binding motif family protein, putative, expressed
UniProt A0A1B6QN63 , C5WZQ8
Pfam PF00612 PF13178
Panther DB PTHR32295 PTHR32295:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G13460 : IQ-domain 11
RAP-DB (Rice) LOC_Os03g23960.1 : IQ calmodulin-binding motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002513
Brachypodium KQK21655 , KQK21657 , KQK21656 , PNT77412
Barley HORVU5Hr1G050840.10 , HORVU5Hr1G050840.8 , HORVU5Hr1G050840.9 , HORVU5Hr1G050840.4 , HORVU5Hr1G050840.5 , HORVU5Hr1G050840.2 , HORVU5Hr1G050840.3 , HORVU5Hr1G050840.1 , HORVU5Hr1G050840.6 , HORVU5Hr1G050840.7
Wheat TraesCS5A02G163000 , TraesCS5D02G168000 , TraesCS5D02G168000 , TraesCS5B02G160400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G368900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G227000 expressed protein -
2 Sobic.006G096200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.001G277800 transferase family protein, putative, expressed -
4 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
5 Sobic.004G254400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
6 Sobic.005G003750 - -
7 Sobic.003G350900 homeobox domain containing protein, expressed -
8 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
9 Sobic.K043500 MYB family transcription factor, putative, expressed -
10 Sobic.005G188000 no apical meristem protein, putative, expressed -
11 Sobic.009G022700 - -
12 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
13 Sobic.003G105600 no apical meristem protein, putative, expressed -
14 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.009G025100 transporter, putative, expressed -
16 Sobic.002G077500 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G156100 OsFBX117 - F-box domain containing protein, expressed -
19 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
20 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -


Gene co-expression network
sample Sobic001G368900 Sobic001G368900 Sobic009G227000 Sobic009G227000 Sobic001G368900--Sobic009G227000 Sobic006G096200 Sobic006G096200 Sobic001G368900--Sobic006G096200 Sobic001G277800 Sobic001G277800 Sobic001G368900--Sobic001G277800 Sobic010G031600 Sobic010G031600 Sobic001G368900--Sobic010G031600 Sobic004G254400 Sobic004G254400 Sobic001G368900--Sobic004G254400 Sobic005G003750 Sobic005G003750 Sobic001G368900--Sobic005G003750 Sobic003G350900 Sobic003G350900 Sobic001G368900--Sobic003G350900 Sobic007G083300 Sobic007G083300 Sobic001G368900--Sobic007G083300 SobicK043500 SobicK043500 Sobic001G368900--SobicK043500 Sobic003G156100 Sobic003G156100 Sobic009G227000--Sobic003G156100 Sobic009G227000--Sobic007G083300 Sobic007G070700 Sobic007G070700 Sobic009G227000--Sobic007G070700 Sobic003G247700 Sobic003G247700 Sobic009G227000--Sobic003G247700 Sobic006G018400 Sobic006G018400 Sobic009G227000--Sobic006G018400 Sobic008G064000 Sobic008G064000 Sobic009G227000--Sobic008G064000 Sobic009G227000--SobicK043500 Sobic002G211700 Sobic002G211700 Sobic009G227000--Sobic002G211700 Sobic001G535900 Sobic001G535900 Sobic009G227000--Sobic001G535900 Sobic010G136300 Sobic010G136300 Sobic006G096200--Sobic010G136300 Sobic003G438700 Sobic003G438700 Sobic006G096200--Sobic003G438700 Sobic008G013100 Sobic008G013100 Sobic006G096200--Sobic008G013100 Sobic004G313800 Sobic004G313800 Sobic006G096200--Sobic004G313800 Sobic003G105600 Sobic003G105600 Sobic006G096200--Sobic003G105600 Sobic006G154300 Sobic006G154300 Sobic006G096200--Sobic006G154300 Sobic006G059900 Sobic006G059900 Sobic006G096200--Sobic006G059900 Sobic009G010150 Sobic009G010150 Sobic006G096200--Sobic009G010150 Sobic006G096200--Sobic010G031600 Sobic001G277800--Sobic010G031600 Sobic007G049400 Sobic007G049400 Sobic001G277800--Sobic007G049400 Sobic001G277800--Sobic007G083300 Sobic001G277800--Sobic007G070700 Sobic001G277800--SobicK043500 Sobic002G077500 Sobic002G077500 Sobic001G277800--Sobic002G077500 Sobic002G077600 Sobic002G077600 Sobic001G277800--Sobic002G077600 Sobic005G140400 Sobic005G140400 Sobic001G277800--Sobic005G140400 Sobic009G186400 Sobic009G186400 Sobic001G277800--Sobic009G186400 Sobic010G031600--Sobic001G277800 Sobic010G031600--Sobic009G186400 Sobic010G031600--Sobic007G083300 Sobic010G031600--Sobic002G077500 Sobic010G031600--SobicK043500 Sobic010G031600--Sobic007G070700 Sobic010G031600--Sobic003G105600 Sobic010G031600--Sobic007G049400 Sobic010G031600--Sobic002G077600 Sobic004G254400--Sobic008G013100 Sobic005G187100 Sobic005G187100 Sobic004G254400--Sobic005G187100 Sobic004G254400--Sobic010G031600 Sobic007G082900 Sobic007G082900 Sobic004G254400--Sobic007G082900 Sobic010G219300 Sobic010G219300 Sobic004G254400--Sobic010G219300 Sobic003G323000 Sobic003G323000 Sobic004G254400--Sobic003G323000 Sobic004G254400--Sobic003G105600 Sobic010G034900 Sobic010G034900 Sobic004G254400--Sobic010G034900 Sobic004G254400--Sobic010G136300 Sobic010G168500 Sobic010G168500 Sobic005G003750--Sobic010G168500 Sobic008G039700 Sobic008G039700 Sobic005G003750--Sobic008G039700 Sobic009G071600 Sobic009G071600 Sobic005G003750--Sobic009G071600 Sobic010G227400 Sobic010G227400 Sobic005G003750--Sobic010G227400 Sobic009G025100 Sobic009G025100 Sobic005G003750--Sobic009G025100 Sobic005G153200 Sobic005G153200 Sobic005G003750--Sobic005G153200 Sobic001G259250 Sobic001G259250 Sobic005G003750--Sobic001G259250 Sobic004G142000 Sobic004G142000 Sobic005G003750--Sobic004G142000 Sobic005G193700 Sobic005G193700 Sobic005G003750--Sobic005G193700 Sobic005G188000 Sobic005G188000 Sobic003G350900--Sobic005G188000 Sobic003G350900--Sobic008G064000 Sobic009G061800 Sobic009G061800 Sobic003G350900--Sobic009G061800 Sobic001G259300 Sobic001G259300 Sobic003G350900--Sobic001G259300 Sobic002G088000 Sobic002G088000 Sobic003G350900--Sobic002G088000 Sobic003G350900--Sobic003G156100 Sobic003G350900--Sobic003G323000 Sobic003G350900--Sobic003G105600 Sobic003G350900--Sobic010G034900 Sobic007G083300--Sobic007G070700 Sobic007G083300--Sobic002G077600 Sobic007G083300--Sobic003G247700 Sobic007G083300--SobicK043500 Sobic007G083300--Sobic002G211700 Sobic001G253501 Sobic001G253501 Sobic007G083300--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic007G083300--Sobic009G245750 Sobic009G001600 Sobic009G001600 Sobic007G083300--Sobic009G001600 Sobic007G083300--Sobic001G535900 SobicK043500--Sobic007G083300 SobicK043500--Sobic007G070700 SobicK043500--Sobic009G186400 SobicK043500--Sobic002G077600 SobicK043500--Sobic003G247700 SobicK043500--Sobic002G077500 SobicK043500--Sobic007G049400 SobicK043500--Sobic002G211700 SobicK043500--Sobic001G253501
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.