Gene annotation
Transcriptome id Sobic.010G078200.1
Synonym Sb10g006790
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z6D3
Pfam -
Panther DB PTHR34268 PTHR34268:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31945 : -
RAP-DB (Rice) LOC_Os06g10530.1 : expressed protein
MaizeGDB (Corn) Zm00025a049616
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G078200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
2 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
3 Sobic.007G049400 OsFBX381 - F-box domain containing protein, expressed -
4 Sobic.001G277800 transferase family protein, putative, expressed -
5 Sobic.005G140400 - -
6 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
7 Sobic.002G077500 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.001G253501 - -
9 Sobic.009G245750 - -
10 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
11 Sobic.K043500 MYB family transcription factor, putative, expressed -
12 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.005G112066 - -
14 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
15 Sobic.005G174900 - -
16 Sobic.001G112250 - -
17 Sobic.002G211700 storage protein(PubMedID : 16668596)@"kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@PROLM23 - Prolamin precursor, expressed -
18 Sobic.009G001600 "kafirin seed storage protein, similar to Beta-kafirin precursor"(PubMedID : 21853065)@PROLM24 - Prolamin precursor, expressed -
19 Sobic.002G091800 peptide transporter PTR2, putative, expressed -
20 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic010G078200 Sobic010G078200 Sobic007G070700 Sobic007G070700 Sobic010G078200--Sobic007G070700 Sobic007G083300 Sobic007G083300 Sobic010G078200--Sobic007G083300 Sobic007G049400 Sobic007G049400 Sobic010G078200--Sobic007G049400 Sobic001G277800 Sobic001G277800 Sobic010G078200--Sobic001G277800 Sobic005G140400 Sobic005G140400 Sobic010G078200--Sobic005G140400 Sobic003G247700 Sobic003G247700 Sobic010G078200--Sobic003G247700 Sobic002G077500 Sobic002G077500 Sobic010G078200--Sobic002G077500 Sobic001G253501 Sobic001G253501 Sobic010G078200--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic010G078200--Sobic009G245750 Sobic002G077600 Sobic002G077600 Sobic007G070700--Sobic002G077600 Sobic007G070700--Sobic007G083300 Sobic007G070700--Sobic003G247700 Sobic007G070700--Sobic001G253501 Sobic007G070700--Sobic009G245750 Sobic002G211700 Sobic002G211700 Sobic007G070700--Sobic002G211700 Sobic009G001600 Sobic009G001600 Sobic007G070700--Sobic009G001600 Sobic001G112250 Sobic001G112250 Sobic007G070700--Sobic001G112250 SobicK043500 SobicK043500 Sobic007G070700--SobicK043500 Sobic007G083300--Sobic007G070700 Sobic007G083300--Sobic002G077600 Sobic007G083300--Sobic003G247700 Sobic007G083300--SobicK043500 Sobic007G083300--Sobic002G211700 Sobic007G083300--Sobic001G253501 Sobic007G083300--Sobic009G245750 Sobic007G083300--Sobic009G001600 Sobic001G535900 Sobic001G535900 Sobic007G083300--Sobic001G535900 Sobic005G112066 Sobic005G112066 Sobic007G049400--Sobic005G112066 Sobic007G049400--Sobic002G077500 Sobic007G049400--Sobic002G077600 Sobic007G049400--Sobic001G253501 Sobic007G049400--Sobic009G245750 Sobic007G049400--Sobic005G140400 Sobic007G049400--Sobic007G070700 Sobic007G049400--Sobic007G083300 Sobic007G049400--Sobic001G112250 Sobic010G031600 Sobic010G031600 Sobic001G277800--Sobic010G031600 Sobic001G277800--Sobic007G049400 Sobic001G277800--Sobic007G083300 Sobic001G277800--Sobic007G070700 Sobic001G277800--SobicK043500 Sobic001G277800--Sobic002G077500 Sobic001G277800--Sobic002G077600 Sobic001G277800--Sobic005G140400 Sobic009G186400 Sobic009G186400 Sobic001G277800--Sobic009G186400 Sobic005G174900 Sobic005G174900 Sobic005G140400--Sobic005G174900 Sobic002G091800 Sobic002G091800 Sobic005G140400--Sobic002G091800 Sobic005G140400--Sobic007G049400 Sobic010G148600 Sobic010G148600 Sobic005G140400--Sobic010G148600 Sobic001G249233 Sobic001G249233 Sobic005G140400--Sobic001G249233 Sobic006G062700 Sobic006G062700 Sobic005G140400--Sobic006G062700 Sobic005G140400--Sobic005G112066 Sobic005G140400--Sobic007G070700 Sobic005G140400--Sobic002G077500 Sobic003G247700--Sobic002G211700 Sobic003G247700--Sobic009G001600 Sobic003G247700--Sobic001G535900 Sobic003G247700--Sobic007G070700 Sobic003G247700--Sobic009G245750 Sobic003G247700--Sobic001G253501 Sobic003G247700--Sobic002G077600 Sobic003G247700--Sobic007G083300 Sobic008G103066 Sobic008G103066 Sobic003G247700--Sobic008G103066 Sobic002G077500--Sobic009G186400 Sobic002G077500--Sobic005G112066 Sobic001G326000 Sobic001G326000 Sobic002G077500--Sobic001G326000 Sobic002G077500--Sobic007G049400 Sobic003G105600 Sobic003G105600 Sobic002G077500--Sobic003G105600 Sobic002G077500--Sobic007G083300 Sobic002G077500--SobicK043500 Sobic002G077500--Sobic005G140400 Sobic002G077500--Sobic007G070700 Sobic001G253501--Sobic009G245750 Sobic001G253501--Sobic003G247700 Sobic001G253501--Sobic009G001600 Sobic001G253501--Sobic002G077600 Sobic001G253501--Sobic007G070700 Sobic001G253501--Sobic001G112250 Sobic001G253501--Sobic002G211700 Sobic001G253501--Sobic008G103066 Sobic001G253501--Sobic007G049400 Sobic009G245750--Sobic001G253501 Sobic009G245750--Sobic003G247700 Sobic009G245750--Sobic009G001600 Sobic009G245750--Sobic002G077600 Sobic009G245750--Sobic007G070700 Sobic009G245750--Sobic001G112250 Sobic009G245750--Sobic002G211700 Sobic009G245750--Sobic008G103066 Sobic009G245750--Sobic007G049400
Octagon: transcription factors


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