Gene annotation
Transcriptome id Sobic.002G211700.1
Synonym gamma-kafirin, gKaf, Sbgkaf;gamma-kafirin gene, Sb02g025510, alcohol-soluble storage proteins
Functional annotation storage protein (PubMedID : 16668596)
"kafirin seed storage protein, delta-kafirin precursor" (PubMedID : 21853065)
PROLM23 - Prolamin precursor, expressed
UniProt Q6Q299 , Q6Q2A0 , Q41506 , G3FMW5 , Q41295 , C5XDL2
Pfam PF13016
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g31060.1 : PROLM23 - Prolamin precursor, expressed
MaizeGDB (Corn) Zm00025a013954
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G211700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP
2 Sobic.009G001600 "kafirin seed storage protein, similar to Beta-kafirin precursor"(PubMedID : 21853065)@PROLM24 - Prolamin precursor, expressed -
3 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
4 Sobic.002G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@"BG2(Ortholog in rice:Xu et al., 2015)"(PubMedID : 31659863)@cytochrome P450, putative, expressed -
5 Sobic.009G245750 - -
6 Sobic.001G253501 - -
7 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
8 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G297800 expressed protein -
10 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
11 Sobic.008G103066 - -
12 Sobic.002G028100 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.001G112250 - -
14 Sobic.006G018400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
15 Sobic.007G025300 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.K043500 MYB family transcription factor, putative, expressed -
17 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.005G174900 - -
19 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.007G049400 OsFBX381 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G211700 Sobic002G211700 Sobic001G535900 Sobic001G535900 Sobic002G211700--Sobic001G535900 Sobic009G001600 Sobic009G001600 Sobic002G211700--Sobic009G001600 Sobic003G247700 Sobic003G247700 Sobic002G211700--Sobic003G247700 Sobic002G367600 Sobic002G367600 Sobic002G211700--Sobic002G367600 Sobic009G245750 Sobic009G245750 Sobic002G211700--Sobic009G245750 Sobic001G253501 Sobic001G253501 Sobic002G211700--Sobic001G253501 Sobic007G070700 Sobic007G070700 Sobic002G211700--Sobic007G070700 Sobic002G077600 Sobic002G077600 Sobic002G211700--Sobic002G077600 Sobic001G297800 Sobic001G297800 Sobic002G211700--Sobic001G297800 Sobic001G535900--Sobic002G211700 Sobic001G535900--Sobic009G001600 Sobic001G535900--Sobic002G367600 Sobic001G535900--Sobic003G247700 Sobic001G535900--Sobic001G297800 Sobic002G028100 Sobic002G028100 Sobic001G535900--Sobic002G028100 Sobic008G103066 Sobic008G103066 Sobic001G535900--Sobic008G103066 Sobic001G535900--Sobic009G245750 Sobic001G535900--Sobic001G253501 Sobic009G001600--Sobic002G211700 Sobic009G001600--Sobic001G535900 Sobic009G001600--Sobic003G247700 Sobic009G001600--Sobic009G245750 Sobic009G001600--Sobic001G253501 Sobic009G001600--Sobic002G367600 Sobic009G001600--Sobic008G103066 Sobic009G001600--Sobic002G077600 Sobic009G001600--Sobic007G070700 Sobic003G247700--Sobic002G211700 Sobic003G247700--Sobic009G001600 Sobic003G247700--Sobic001G535900 Sobic003G247700--Sobic007G070700 Sobic003G247700--Sobic009G245750 Sobic003G247700--Sobic001G253501 Sobic003G247700--Sobic002G077600 Sobic007G083300 Sobic007G083300 Sobic003G247700--Sobic007G083300 Sobic003G247700--Sobic008G103066 Sobic002G367600--Sobic002G028100 Sobic002G367600--Sobic001G535900 Sobic002G367600--Sobic001G297800 Sobic002G367600--Sobic002G211700 Sobic002G367600--Sobic009G001600 Sobic002G367600--Sobic003G247700 Sobic002G089400 Sobic002G089400 Sobic002G367600--Sobic002G089400 Sobic002G367600--Sobic008G103066 Sobic007G025300 Sobic007G025300 Sobic002G367600--Sobic007G025300 Sobic009G245750--Sobic001G253501 Sobic009G245750--Sobic003G247700 Sobic009G245750--Sobic009G001600 Sobic009G245750--Sobic002G077600 Sobic009G245750--Sobic007G070700 Sobic001G112250 Sobic001G112250 Sobic009G245750--Sobic001G112250 Sobic009G245750--Sobic002G211700 Sobic009G245750--Sobic008G103066 Sobic007G049400 Sobic007G049400 Sobic009G245750--Sobic007G049400 Sobic001G253501--Sobic009G245750 Sobic001G253501--Sobic003G247700 Sobic001G253501--Sobic009G001600 Sobic001G253501--Sobic002G077600 Sobic001G253501--Sobic007G070700 Sobic001G253501--Sobic001G112250 Sobic001G253501--Sobic002G211700 Sobic001G253501--Sobic008G103066 Sobic001G253501--Sobic007G049400 Sobic007G070700--Sobic002G077600 Sobic007G070700--Sobic007G083300 Sobic007G070700--Sobic003G247700 Sobic007G070700--Sobic001G253501 Sobic007G070700--Sobic009G245750 Sobic007G070700--Sobic002G211700 Sobic007G070700--Sobic009G001600 Sobic007G070700--Sobic001G112250 SobicK043500 SobicK043500 Sobic007G070700--SobicK043500 Sobic002G077600--Sobic007G070700 Sobic002G077600--Sobic007G083300 Sobic002G077600--Sobic001G253501 Sobic002G077600--Sobic009G245750 Sobic002G077600--Sobic003G247700 Sobic002G077600--Sobic001G112250 Sobic002G077600--Sobic009G001600 Sobic002G077600--Sobic002G211700 Sobic002G077600--Sobic007G049400 Sobic001G297800--Sobic002G367600 Sobic001G297800--Sobic001G535900 Sobic001G297800--Sobic002G028100 Sobic001G297800--Sobic002G211700 Sobic001G297800--Sobic002G089400 Sobic001G297800--Sobic009G001600 Sobic001G297800--Sobic003G247700 Sobic009G116500 Sobic009G116500 Sobic001G297800--Sobic009G116500 Sobic006G018400 Sobic006G018400 Sobic001G297800--Sobic006G018400
Octagon: transcription factors


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