Gene annotation
Transcriptome id Sobic.010G196800.3,Sobic.010G196800.2
Synonym Sb10g024600
Functional annotation OsFBX436 - F-box domain containing protein, expressed
UniProt A0A1W0VTZ0
Pfam PF08268 PF00646
Panther DB PTHR32133 PTHR32133:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G30790 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os12g03440.1 : OsFBX436 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87298
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G325700 expressed protein -
2 Sobic.009G131400 basic 7S globulin precursor, putative, expressed -
3 Sobic.001G050900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
4 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
5 Sobic.005G064200 eukaryotic aspartyl protease domain containing protein, expressed -
6 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
8 Sobic.009G170800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.001G389900 aquaporin SIP2-1, putative, expressed K09875: aquaporin SIP
10 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
11 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
12 Sobic.003G295000 DUF584 domain containing protein, putative, expressed -
13 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
14 Sobic.006G158200 lectin-like receptor kinase, putative, expressed -
15 Sobic.002G051700 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
16 Sobic.006G207100 expressed protein -
17 Sobic.001G154400 expp1 protein precursor, putative, expressed -
18 Sobic.002G338250 - -
19 Sobic.004G024200 similar to Bax inhibitor 1(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transmembrane BAX inhibitor motif-containing protein, putative, expressed -
20 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -


Gene co-expression network
sample Sobic010G196800 Sobic010G196800 Sobic003G325700 Sobic003G325700 Sobic010G196800--Sobic003G325700 Sobic009G131400 Sobic009G131400 Sobic010G196800--Sobic009G131400 Sobic001G050900 Sobic001G050900 Sobic010G196800--Sobic001G050900 Sobic003G146400 Sobic003G146400 Sobic010G196800--Sobic003G146400 Sobic005G064200 Sobic005G064200 Sobic010G196800--Sobic005G064200 Sobic008G111500 Sobic008G111500 Sobic010G196800--Sobic008G111500 Sobic009G216800 Sobic009G216800 Sobic010G196800--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic010G196800--Sobic009G170800 Sobic001G389900 Sobic001G389900 Sobic010G196800--Sobic001G389900 Sobic004G063500 Sobic004G063500 Sobic003G325700--Sobic004G063500 Sobic003G325700--Sobic003G146400 Sobic003G325700--Sobic010G196800 Sobic002G113500 Sobic002G113500 Sobic003G325700--Sobic002G113500 Sobic003G063200 Sobic003G063200 Sobic003G325700--Sobic003G063200 Sobic006G158200 Sobic006G158200 Sobic003G325700--Sobic006G158200 Sobic003G325700--Sobic008G111500 Sobic004G247200 Sobic004G247200 Sobic003G325700--Sobic004G247200 Sobic003G325700--Sobic009G131400 Sobic009G131400--Sobic008G111500 Sobic007G074200 Sobic007G074200 Sobic009G131400--Sobic007G074200 Sobic001G447100 Sobic001G447100 Sobic009G131400--Sobic001G447100 Sobic004G024200 Sobic004G024200 Sobic009G131400--Sobic004G024200 Sobic003G349700 Sobic003G349700 Sobic009G131400--Sobic003G349700 Sobic006G207100 Sobic006G207100 Sobic009G131400--Sobic006G207100 Sobic009G131400--Sobic003G146400 Sobic004G086400 Sobic004G086400 Sobic009G131400--Sobic004G086400 Sobic007G176600 Sobic007G176600 Sobic009G131400--Sobic007G176600 Sobic004G102900 Sobic004G102900 Sobic001G050900--Sobic004G102900 Sobic001G050900--Sobic010G196800 Sobic001G050900--Sobic005G064200 Sobic007G208200 Sobic007G208200 Sobic001G050900--Sobic007G208200 Sobic003G295000 Sobic003G295000 Sobic001G050900--Sobic003G295000 Sobic005G098700 Sobic005G098700 Sobic001G050900--Sobic005G098700 Sobic009G199300 Sobic009G199300 Sobic001G050900--Sobic009G199300 Sobic007G194100 Sobic007G194100 Sobic001G050900--Sobic007G194100 Sobic004G318400 Sobic004G318400 Sobic001G050900--Sobic004G318400 Sobic009G179500 Sobic009G179500 Sobic003G146400--Sobic009G179500 Sobic009G184000 Sobic009G184000 Sobic003G146400--Sobic009G184000 Sobic004G306300 Sobic004G306300 Sobic003G146400--Sobic004G306300 Sobic003G146400--Sobic007G074200 Sobic003G432700 Sobic003G432700 Sobic003G146400--Sobic003G432700 Sobic006G007900 Sobic006G007900 Sobic003G146400--Sobic006G007900 Sobic003G146400--Sobic006G158200 Sobic001G079300 Sobic001G079300 Sobic003G146400--Sobic001G079300 Sobic006G235100 Sobic006G235100 Sobic003G146400--Sobic006G235100 Sobic007G018000 Sobic007G018000 Sobic005G064200--Sobic007G018000 Sobic003G324300 Sobic003G324300 Sobic005G064200--Sobic003G324300 Sobic005G064200--Sobic004G318400 Sobic005G064200--Sobic007G208200 Sobic005G064200--Sobic005G098700 Sobic005G064200--Sobic001G050900 Sobic005G064200--Sobic009G199300 Sobic005G064200--Sobic007G194100 Sobic005G064200--Sobic010G196800 Sobic008G111500--Sobic007G074200 Sobic008G111500--Sobic009G131400 Sobic008G111500--Sobic001G447100 Sobic006G100200 Sobic006G100200 Sobic008G111500--Sobic006G100200 Sobic008G111500--Sobic003G349700 Sobic004G117600 Sobic004G117600 Sobic008G111500--Sobic004G117600 Sobic002G338250 Sobic002G338250 Sobic008G111500--Sobic002G338250 Sobic001G100600 Sobic001G100600 Sobic008G111500--Sobic001G100600 Sobic002G393600 Sobic002G393600 Sobic008G111500--Sobic002G393600 Sobic002G372400 Sobic002G372400 Sobic009G216800--Sobic002G372400 Sobic002G348100 Sobic002G348100 Sobic009G216800--Sobic002G348100 Sobic003G078200 Sobic003G078200 Sobic009G216800--Sobic003G078200 Sobic002G251900 Sobic002G251900 Sobic009G216800--Sobic002G251900 Sobic008G186600 Sobic008G186600 Sobic009G216800--Sobic008G186600 Sobic004G055700 Sobic004G055700 Sobic009G216800--Sobic004G055700 Sobic006G136800 Sobic006G136800 Sobic009G216800--Sobic006G136800 Sobic001G403500 Sobic001G403500 Sobic009G216800--Sobic001G403500 Sobic003G109600 Sobic003G109600 Sobic009G216800--Sobic003G109600 Sobic004G067900 Sobic004G067900 Sobic009G170800--Sobic004G067900 Sobic009G170800--Sobic009G216800 Sobic002G308400 Sobic002G308400 Sobic009G170800--Sobic002G308400 Sobic009G170800--Sobic010G196800 Sobic002G419500 Sobic002G419500 Sobic009G170800--Sobic002G419500 Sobic009G170800--Sobic004G318400 Sobic006G066600 Sobic006G066600 Sobic009G170800--Sobic006G066600 Sobic001G106400 Sobic001G106400 Sobic009G170800--Sobic001G106400 Sobic009G170800--Sobic004G102900 Sobic003G403400 Sobic003G403400 Sobic001G389900--Sobic003G403400 Sobic009G232800 Sobic009G232800 Sobic001G389900--Sobic009G232800 Sobic001G477300 Sobic001G477300 Sobic001G389900--Sobic001G477300 Sobic002G046100 Sobic002G046100 Sobic001G389900--Sobic002G046100 Sobic004G177700 Sobic004G177700 Sobic001G389900--Sobic004G177700 Sobic009G063900 Sobic009G063900 Sobic001G389900--Sobic009G063900 Sobic001G066700 Sobic001G066700 Sobic001G389900--Sobic001G066700 Sobic001G389900--Sobic001G447100 Sobic003G072300 Sobic003G072300 Sobic001G389900--Sobic003G072300
Octagon: transcription factors


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