Gene annotation
Transcriptome id Sobic.004G024200.1
Synonym BI1, ATBI-1, ATBI1, Sb04g002150, BI-1
Functional annotation similar to Bax inhibitor 1 (PubMedID : 29862293)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
transmembrane BAX inhibitor motif-containing protein, putative, expressed
UniProt C5XT65
Pfam PF01027
Panther DB PTHR23291 PTHR23291:SF34
NCBI CDD KOG1629; Bax-mediated apoptosis inhibitor TEGT/BI-1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47120 : BAX inhibitor 1
RAP-DB (Rice) LOC_Os02g03280.2 : transmembrane BAX inhibitor motif-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a034959 , Zm00025a018797
Brachypodium KQJ93062
Barley HORVU6Hr1G014450.6 , HORVU6Hr1G014450.4 , HORVU6Hr1G014450.5 , HORVU6Hr1G014450.3 , HORVU6Hr1G014450.1
Wheat TraesCS6A02G083200 , TraesCS6B02G113900 , TraesCS6D02G077000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G024200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
2 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
3 Sobic.007G176600 expressed protein -
4 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
5 Sobic.006G207100 expressed protein -
6 Sobic.009G131400 basic 7S globulin precursor, putative, expressed -
7 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
8 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G108200 expressed protein -
10 Sobic.008G111500 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
13 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
14 Sobic.003G377100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
15 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
16 Sobic.007G214600 EF hand family protein, putative, expressed -
17 Sobic.003G355100 expressed protein -
18 Sobic.001G100600 expressed protein -
19 Sobic.004G306300 expressed protein -
20 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G024200 Sobic004G024200 Sobic001G447100 Sobic001G447100 Sobic004G024200--Sobic001G447100 Sobic003G349700 Sobic003G349700 Sobic004G024200--Sobic003G349700 Sobic007G176600 Sobic007G176600 Sobic004G024200--Sobic007G176600 Sobic004G086400 Sobic004G086400 Sobic004G024200--Sobic004G086400 Sobic006G207100 Sobic006G207100 Sobic004G024200--Sobic006G207100 Sobic009G131400 Sobic009G131400 Sobic004G024200--Sobic009G131400 Sobic004G146000 Sobic004G146000 Sobic004G024200--Sobic004G146000 Sobic003G041200 Sobic003G041200 Sobic004G024200--Sobic003G041200 Sobic001G108200 Sobic001G108200 Sobic004G024200--Sobic001G108200 Sobic001G447100--Sobic003G349700 Sobic001G447100--Sobic004G024200 Sobic001G447100--Sobic007G176600 Sobic008G111500 Sobic008G111500 Sobic001G447100--Sobic008G111500 Sobic007G074200 Sobic007G074200 Sobic001G447100--Sobic007G074200 Sobic001G100600 Sobic001G100600 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic001G447100--Sobic009G131400 Sobic001G447100--Sobic003G041200 Sobic003G349700--Sobic001G447100 Sobic001G387900 Sobic001G387900 Sobic003G349700--Sobic001G387900 Sobic003G349700--Sobic001G108200 Sobic003G349700--Sobic001G100600 Sobic001G308300 Sobic001G308300 Sobic003G349700--Sobic001G308300 Sobic002G336600 Sobic002G336600 Sobic003G349700--Sobic002G336600 Sobic003G349700--Sobic003G041200 Sobic004G141200 Sobic004G141200 Sobic003G349700--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G349700--Sobic003G369100 Sobic007G176600--Sobic001G447100 Sobic007G176600--Sobic003G349700 Sobic006G207000 Sobic006G207000 Sobic007G176600--Sobic006G207000 Sobic007G176600--Sobic006G207100 Sobic007G176600--Sobic004G024200 Sobic010G196600 Sobic010G196600 Sobic007G176600--Sobic010G196600 Sobic004G037000 Sobic004G037000 Sobic007G176600--Sobic004G037000 Sobic007G176600--Sobic004G086400 Sobic007G155200 Sobic007G155200 Sobic007G176600--Sobic007G155200 Sobic003G148300 Sobic003G148300 Sobic004G086400--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic004G086400--Sobic004G108200 Sobic004G004500 Sobic004G004500 Sobic004G086400--Sobic004G004500 Sobic010G212800 Sobic010G212800 Sobic004G086400--Sobic010G212800 Sobic004G086400--Sobic006G207000 Sobic007G006300 Sobic007G006300 Sobic004G086400--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic004G086400--Sobic002G234400 Sobic002G339000 Sobic002G339000 Sobic004G086400--Sobic002G339000 Sobic009G189501 Sobic009G189501 Sobic004G086400--Sobic009G189501 Sobic006G207100--Sobic006G207000 Sobic006G207100--Sobic004G004500 Sobic003G116800 Sobic003G116800 Sobic006G207100--Sobic003G116800 Sobic006G207100--Sobic002G339000 Sobic006G207100--Sobic004G086400 Sobic006G207100--Sobic001G108200 Sobic007G036900 Sobic007G036900 Sobic006G207100--Sobic007G036900 Sobic001G256700 Sobic001G256700 Sobic006G207100--Sobic001G256700 Sobic006G207100--Sobic003G148300 Sobic009G131400--Sobic008G111500 Sobic009G131400--Sobic007G074200 Sobic009G131400--Sobic001G447100 Sobic009G131400--Sobic004G024200 Sobic009G131400--Sobic003G349700 Sobic009G131400--Sobic006G207100 Sobic003G146400 Sobic003G146400 Sobic009G131400--Sobic003G146400 Sobic009G131400--Sobic004G086400 Sobic009G131400--Sobic007G176600 Sobic003G393900 Sobic003G393900 Sobic004G146000--Sobic003G393900 Sobic006G267200 Sobic006G267200 Sobic004G146000--Sobic006G267200 Sobic001G459800 Sobic001G459800 Sobic004G146000--Sobic001G459800 Sobic004G146000--Sobic001G108200 Sobic001G405500 Sobic001G405500 Sobic004G146000--Sobic001G405500 Sobic004G146000--Sobic004G141200 Sobic004G065500 Sobic004G065500 Sobic004G146000--Sobic004G065500 Sobic003G355100 Sobic003G355100 Sobic004G146000--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic004G146000--Sobic003G148600 Sobic003G041200--Sobic002G336600 Sobic007G155000 Sobic007G155000 Sobic003G041200--Sobic007G155000 Sobic001G435000 Sobic001G435000 Sobic003G041200--Sobic001G435000 Sobic009G159400 Sobic009G159400 Sobic003G041200--Sobic009G159400 Sobic009G234100 Sobic009G234100 Sobic003G041200--Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic003G041200--Sobic004G208700 Sobic001G038900 Sobic001G038900 Sobic003G041200--Sobic001G038900 Sobic006G158600 Sobic006G158600 Sobic003G041200--Sobic006G158600 Sobic004G061200 Sobic004G061200 Sobic003G041200--Sobic004G061200 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic004G100700 Sobic004G100700 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.