Gene annotation
Transcriptome id Sobic.008G111500.1
Synonym Sb08g016550
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt C5YP66
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF145
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35760 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os12g32970.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a054422
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.008G111500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
2 Sobic.009G131400 basic 7S globulin precursor, putative, expressed -
3 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
4 Sobic.006G100200 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.003G349700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-15 - C2H2 zinc finger protein, expressed -
6 Sobic.004G117600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed -
7 Sobic.002G338250 - -
8 Sobic.001G100600 expressed protein -
9 Sobic.002G393600 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G024200 similar to Bax inhibitor 1(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@transmembrane BAX inhibitor motif-containing protein, putative, expressed -
12 Sobic.004G306300 expressed protein -
13 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
14 Sobic.009G154200 MYB family transcription factor, putative, expressed -
15 Sobic.003G144900 expressed protein -
16 Sobic.003G088400 Up-reguralion under drought(PubMedID : 24916767)@BBTI11 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed -
17 Sobic.009G151600 AP2 domain containing protein, expressed -
18 Sobic.006G207100 expressed protein -
19 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
20 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic008G111500 Sobic008G111500 Sobic007G074200 Sobic007G074200 Sobic008G111500--Sobic007G074200 Sobic009G131400 Sobic009G131400 Sobic008G111500--Sobic009G131400 Sobic001G447100 Sobic001G447100 Sobic008G111500--Sobic001G447100 Sobic006G100200 Sobic006G100200 Sobic008G111500--Sobic006G100200 Sobic003G349700 Sobic003G349700 Sobic008G111500--Sobic003G349700 Sobic004G117600 Sobic004G117600 Sobic008G111500--Sobic004G117600 Sobic002G338250 Sobic002G338250 Sobic008G111500--Sobic002G338250 Sobic001G100600 Sobic001G100600 Sobic008G111500--Sobic001G100600 Sobic002G393600 Sobic002G393600 Sobic008G111500--Sobic002G393600 Sobic007G074200--Sobic008G111500 Sobic007G074200--Sobic002G393600 Sobic007G074200--Sobic002G338250 Sobic007G074200--Sobic001G447100 Sobic007G074200--Sobic004G117600 Sobic007G074200--Sobic009G131400 Sobic003G146400 Sobic003G146400 Sobic007G074200--Sobic003G146400 Sobic007G074200--Sobic003G349700 Sobic009G154200 Sobic009G154200 Sobic007G074200--Sobic009G154200 Sobic009G131400--Sobic008G111500 Sobic009G131400--Sobic007G074200 Sobic009G131400--Sobic001G447100 Sobic004G024200 Sobic004G024200 Sobic009G131400--Sobic004G024200 Sobic009G131400--Sobic003G349700 Sobic006G207100 Sobic006G207100 Sobic009G131400--Sobic006G207100 Sobic009G131400--Sobic003G146400 Sobic004G086400 Sobic004G086400 Sobic009G131400--Sobic004G086400 Sobic007G176600 Sobic007G176600 Sobic009G131400--Sobic007G176600 Sobic001G447100--Sobic003G349700 Sobic001G447100--Sobic004G024200 Sobic001G447100--Sobic007G176600 Sobic001G447100--Sobic008G111500 Sobic001G447100--Sobic007G074200 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic001G447100--Sobic009G131400 Sobic003G041200 Sobic003G041200 Sobic001G447100--Sobic003G041200 Sobic006G100200--Sobic008G111500 Sobic006G100200--Sobic003G041200 Sobic005G139075 Sobic005G139075 Sobic006G100200--Sobic005G139075 Sobic009G221400 Sobic009G221400 Sobic006G100200--Sobic009G221400 Sobic002G336600 Sobic002G336600 Sobic006G100200--Sobic002G336600 Sobic002G192000 Sobic002G192000 Sobic006G100200--Sobic002G192000 Sobic009G198600 Sobic009G198600 Sobic006G100200--Sobic009G198600 Sobic002G319500 Sobic002G319500 Sobic006G100200--Sobic002G319500 Sobic002G353900 Sobic002G353900 Sobic006G100200--Sobic002G353900 Sobic003G349700--Sobic001G447100 Sobic001G387900 Sobic001G387900 Sobic003G349700--Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic003G349700--Sobic001G108200 Sobic003G349700--Sobic001G100600 Sobic001G308300 Sobic001G308300 Sobic003G349700--Sobic001G308300 Sobic003G349700--Sobic002G336600 Sobic003G349700--Sobic003G041200 Sobic004G141200 Sobic004G141200 Sobic003G349700--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G349700--Sobic003G369100 Sobic004G117600--Sobic007G074200 Sobic004G117600--Sobic002G338250 Sobic004G117600--Sobic009G154200 Sobic004G117600--Sobic008G111500 Sobic004G117600--Sobic002G393600 Sobic009G159400 Sobic009G159400 Sobic004G117600--Sobic009G159400 Sobic004G301300 Sobic004G301300 Sobic004G117600--Sobic004G301300 Sobic002G239200 Sobic002G239200 Sobic004G117600--Sobic002G239200 Sobic006G136800 Sobic006G136800 Sobic004G117600--Sobic006G136800 Sobic002G338250--Sobic007G074200 Sobic002G338250--Sobic004G117600 Sobic002G338250--Sobic009G154200 Sobic002G338250--Sobic002G393600 Sobic002G338250--Sobic008G111500 Sobic001G389900 Sobic001G389900 Sobic002G338250--Sobic001G389900 Sobic002G338250--Sobic003G349700 Sobic002G338250--Sobic001G447100 Sobic002G338250--Sobic006G136800 Sobic004G229800 Sobic004G229800 Sobic001G100600--Sobic004G229800 Sobic001G100600--Sobic002G336600 Sobic001G100600--Sobic003G349700 Sobic001G100600--Sobic002G192000 Sobic002G140400 Sobic002G140400 Sobic001G100600--Sobic002G140400 Sobic007G036900 Sobic007G036900 Sobic001G100600--Sobic007G036900 Sobic007G074000 Sobic007G074000 Sobic001G100600--Sobic007G074000 Sobic001G100600--Sobic004G141200 Sobic001G435000 Sobic001G435000 Sobic001G100600--Sobic001G435000 Sobic002G393600--Sobic007G074200 Sobic002G393600--Sobic002G338250 Sobic002G393600--Sobic004G117600 Sobic002G393600--Sobic008G111500 Sobic001G488000 Sobic001G488000 Sobic002G393600--Sobic001G488000 Sobic002G393600--Sobic009G131400 Sobic002G393600--Sobic003G146400 Sobic006G198800 Sobic006G198800 Sobic002G393600--Sobic006G198800 Sobic002G393600--Sobic006G136800
Octagon: transcription factors


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