Gene annotation
Transcriptome id Sobic.003G349700.1
Synonym Sb03g039270
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
ZOS1-15 - C2H2 zinc finger protein, expressed
UniProt A0A1W0W0D6
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF206
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46080 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os01g62190.1 : ZOS1-15 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a012288 , Zm00025a039693 , Zm00025a026939 , Zm00025a001885
Brachypodium PNT60482 , KQK10499 , KQJ81406
Barley HORVU5Hr1G112870.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
2 Sobic.001G387900 Chaperone - similar to Cluster: DnaJ domain containing protein(PubMedID : 24655390)@ Oryza sativa(PubMedID : 27586543)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 24655390)@chaperone protein dnaJ, putative, expressed -
3 Sobic.001G108200 expressed protein -
4 Sobic.001G100600 expressed protein -
5 Sobic.001G308300 expressed protein -
6 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
7 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
9 Sobic.003G369100 AP2 domain containing protein, expressed -
10 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.008G136400 expressed protein -
12 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
13 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
15 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
16 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
17 Sobic.006G207100 expressed protein -
18 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
19 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
20 Sobic.001G423800 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G349700 Sobic003G349700 Sobic001G447100 Sobic001G447100 Sobic003G349700--Sobic001G447100 Sobic001G387900 Sobic001G387900 Sobic003G349700--Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic003G349700--Sobic001G108200 Sobic001G100600 Sobic001G100600 Sobic003G349700--Sobic001G100600 Sobic001G308300 Sobic001G308300 Sobic003G349700--Sobic001G308300 Sobic002G336600 Sobic002G336600 Sobic003G349700--Sobic002G336600 Sobic003G041200 Sobic003G041200 Sobic003G349700--Sobic003G041200 Sobic004G141200 Sobic004G141200 Sobic003G349700--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic003G349700--Sobic003G369100 Sobic001G447100--Sobic003G349700 Sobic004G024200 Sobic004G024200 Sobic001G447100--Sobic004G024200 Sobic007G176600 Sobic007G176600 Sobic001G447100--Sobic007G176600 Sobic008G111500 Sobic008G111500 Sobic001G447100--Sobic008G111500 Sobic007G074200 Sobic007G074200 Sobic001G447100--Sobic007G074200 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic009G131400 Sobic009G131400 Sobic001G447100--Sobic009G131400 Sobic001G447100--Sobic003G041200 Sobic001G387900--Sobic001G108200 Sobic001G387900--Sobic001G308300 Sobic001G387900--Sobic004G141200 Sobic003G382800 Sobic003G382800 Sobic001G387900--Sobic003G382800 Sobic003G086600 Sobic003G086600 Sobic001G387900--Sobic003G086600 Sobic006G158600 Sobic006G158600 Sobic001G387900--Sobic006G158600 Sobic003G078100 Sobic003G078100 Sobic001G387900--Sobic003G078100 Sobic001G387900--Sobic003G369100 Sobic004G304625 Sobic004G304625 Sobic001G387900--Sobic004G304625 Sobic001G108200--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G108200--Sobic003G393900 Sobic004G100700 Sobic004G100700 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000 Sobic004G229800 Sobic004G229800 Sobic001G100600--Sobic004G229800 Sobic001G100600--Sobic002G336600 Sobic001G100600--Sobic003G349700 Sobic002G192000 Sobic002G192000 Sobic001G100600--Sobic002G192000 Sobic002G140400 Sobic002G140400 Sobic001G100600--Sobic002G140400 Sobic007G036900 Sobic007G036900 Sobic001G100600--Sobic007G036900 Sobic007G074000 Sobic007G074000 Sobic001G100600--Sobic007G074000 Sobic001G100600--Sobic004G141200 Sobic001G435000 Sobic001G435000 Sobic001G100600--Sobic001G435000 Sobic001G308300--Sobic002G140400 Sobic001G308300--Sobic003G369100 Sobic001G308300--Sobic004G141200 Sobic001G308300--Sobic001G108200 Sobic001G308300--Sobic007G074000 Sobic001G308300--Sobic001G387900 Sobic001G038900 Sobic001G038900 Sobic001G308300--Sobic001G038900 Sobic003G364600 Sobic003G364600 Sobic001G308300--Sobic003G364600 Sobic001G308300--Sobic006G158600 Sobic004G237800 Sobic004G237800 Sobic002G336600--Sobic004G237800 Sobic002G336600--Sobic007G074000 Sobic004G208700 Sobic004G208700 Sobic002G336600--Sobic004G208700 Sobic002G336600--Sobic004G229800 Sobic002G336600--Sobic003G369100 Sobic002G336600--Sobic001G435000 Sobic002G336600--Sobic002G140400 Sobic002G336600--Sobic004G141200 Sobic003G345100 Sobic003G345100 Sobic002G336600--Sobic003G345100 Sobic003G041200--Sobic002G336600 Sobic007G155000 Sobic007G155000 Sobic003G041200--Sobic007G155000 Sobic003G041200--Sobic001G435000 Sobic009G159400 Sobic009G159400 Sobic003G041200--Sobic009G159400 Sobic009G234100 Sobic009G234100 Sobic003G041200--Sobic009G234100 Sobic003G041200--Sobic004G208700 Sobic003G041200--Sobic001G038900 Sobic003G041200--Sobic006G158600 Sobic004G061200 Sobic004G061200 Sobic003G041200--Sobic004G061200 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic001G140900 Sobic001G140900 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G369100--Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic003G369100--Sobic008G050600 Sobic003G369100--Sobic001G308300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.